Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yeaZ [C]
Identifier: 15887703
GI number: 15887703
Start: 346963
End: 347631
Strand: Direct
Name: yeaZ [C]
Synonym: Atu0352
Alternate gene names: 15887703
Gene position: 346963-347631 (Clockwise)
Preceding gene: 15887702
Following gene: 15887704
Centisome position: 12.21
GC content: 64.28
Gene sequence:
>669_bases ATGATTGTTCTCGCACTCGACACGTCAGGGGTGGATTGTTCCGCCTGTATCTATGACAACGCCTCTGACACTGTGCTCGG CGAGGTCTGCGAGACGATCGGCAAGGGCCATGCCGAAAGGCTGATGGCGGTGATCGACGGTGCCCTGCAGCAGGCACAAT TGCCGCTCCAGAAGGTCGAGCGGATTGCGGTGACCATCGGTCCGGGGTCCTTCACGGGCATTCGGGTCGGCGTTGCCGCG GCGCGCGGTTTTGCCCTGTCGCTCGGCGTCGAGGCCGTCGGCGTTACCACGCTCGAGACGCTTGCCCTGCATCATCTGGC CGAAAATCCAGGCCGGCCTGTGGCCGTCGGGCTCGATGCGAAACGCGGCGAAACCTATCTCCAGATATTCGGCACGGATG GATCACCACTCAACGAGGCGGCGCTTCTGTCTCTGGATGACGCCAAAGATGCCCTTTCCGGTTTTGACGGTGCCGTCATC GGCTCCGCCGCGCCGCTGTTTGCGGGAGAGGAAACCGGCTCCGGGCCGGACCATTTCCCGATTGCCTTCGTCGCGCGCGC CGGAGCGCGCAAGTCGGCAGGCCAACCAAAACCCGCGCCGCTTTATCTGCGCGGGCCGGATGCCCGGCCACAGACAGGTT TTGCGCTGGCACGTCAGGACGTTGCCTGA
Upstream 100 bases:
>100_bases TCTTCAACTGCCACGCTTAAGCACGGGGTTCAGAACCTGCTTCGCCATTTCGTGCCCGAAGTGCGCGAAGTCGAAGCGGT TTGATGCTGTCAGCCAGACC
Downstream 100 bases:
>100_bases TACGGCATGCATGAGTGCTTGTTTCTGATTCCTGATATTTGCGATGTTTGACGATTACCTGAGCTGGAAACCCTATTTCG AGATCGTGCCGATGCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MIVLALDTSGVDCSACIYDNASDTVLGEVCETIGKGHAERLMAVIDGALQQAQLPLQKVERIAVTIGPGSFTGIRVGVAA ARGFALSLGVEAVGVTTLETLALHHLAENPGRPVAVGLDAKRGETYLQIFGTDGSPLNEAALLSLDDAKDALSGFDGAVI GSAAPLFAGEETGSGPDHFPIAFVARAGARKSAGQPKPAPLYLRGPDARPQTGFALARQDVA
Sequences:
>Translated_222_residues MIVLALDTSGVDCSACIYDNASDTVLGEVCETIGKGHAERLMAVIDGALQQAQLPLQKVERIAVTIGPGSFTGIRVGVAA ARGFALSLGVEAVGVTTLETLALHHLAENPGRPVAVGLDAKRGETYLQIFGTDGSPLNEAALLSLDDAKDALSGFDGAVI GSAAPLFAGEETGSGPDHFPIAFVARAGARKSAGQPKPAPLYLRGPDARPQTGFALARQDVA >Mature_222_residues MIVLALDTSGVDCSACIYDNASDTVLGEVCETIGKGHAERLMAVIDGALQQAQLPLQKVERIAVTIGPGSFTGIRVGVAA ARGFALSLGVEAVGVTTLETLALHHLAENPGRPVAVGLDAKRGETYLQIFGTDGSPLNEAALLSLDDAKDALSGFDGAVI GSAAPLFAGEETGSGPDHFPIAFVARAGARKSAGQPKPAPLYLRGPDARPQTGFALARQDVA
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=133, Percent_Identity=30.8270676691729, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 22686; Mature: 22686
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLALDTSGVDCSACIYDNASDTVLGEVCETIGKGHAERLMAVIDGALQQAQLPLQKVE CEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCC RIAVTIGPGSFTGIRVGVAAARGFALSLGVEAVGVTTLETLALHHLAENPGRPVAVGLDA EEEEEECCCCCCEEEEEHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC KRGETYLQIFGTDGSPLNEAALLSLDDAKDALSGFDGAVIGSAAPLFAGEETGSGPDHFP CCCCEEEEEEECCCCCCCCEEEEEECCHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCC IAFVARAGARKSAGQPKPAPLYLRGPDARPQTGFALARQDVA EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCC >Mature Secondary Structure MIVLALDTSGVDCSACIYDNASDTVLGEVCETIGKGHAERLMAVIDGALQQAQLPLQKVE CEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCC RIAVTIGPGSFTGIRVGVAAARGFALSLGVEAVGVTTLETLALHHLAENPGRPVAVGLDA EEEEEECCCCCCEEEEEHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC KRGETYLQIFGTDGSPLNEAALLSLDDAKDALSGFDGAVIGSAAPLFAGEETGSGPDHFP CCCCEEEEEEECCCCCCCCEEEEEECCHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCC IAFVARAGARKSAGQPKPAPLYLRGPDARPQTGFALARQDVA EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]