Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887699
Identifier: 15887699
GI number: 15887699
Start: 344062
End: 344466
Strand: Direct
Name: 15887699
Synonym: Atu0348
Alternate gene names: NA
Gene position: 344062-344466 (Clockwise)
Preceding gene: 159184270
Following gene: 159184271
Centisome position: 12.11
GC content: 59.01
Gene sequence:
>405_bases ATGTCCTTTTCTGAAAACCGCCGCATCGCGCTGGTCACGCTTGTCGTGGATAACTATGATCGGGCAAAGGCGTTTTACTG CGATGTTCTCGGCTTCGAGTGCCTCTCCGATAAGCCGCTTGACGACGGCAAAAGGTGGGTTGTGGTCAAGCCGCAAGGCG CCGAGGGTGGTGCCCTGCTGCTCGCCGAGGCGGATGGCGAACAGCAACGGCTTGCCATCGGCAACCAGACCGGCGGCCGT GTCGGATTTTTCCTGCATACCGACGATTTTGCTCGCGACTATGAAACCATGATTGCCCGCGGCGTGCACTTTCTGGAAGA GCCGCGCCATGAGGTTTATGGTTCGGTCGCGGTCTTTGCCGACCCTTACGGAAATCGCTGGGACCTTCTTCAGCCGCGCG GTTGA
Upstream 100 bases:
>100_bases ATTTCGTGCTGGCTTTCGTTTCTGGCGGTGCCGATATCGGCATGGTCAAGAGAGCCGTGCGCAAGCGCGGTAAAAAGACC GCCGAGACGGAGGTGGGCTG
Downstream 100 bases:
>100_bases CGGCCCTTGAAACCGCTTGATTGCGAGGGGCTGTGGGTGCATAAGCGCGCGTGCAATTGCAAACACGGGGCGGGGCCCTC CACAAGCCTTTTCGAGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSFSENRRIALVTLVVDNYDRAKAFYCDVLGFECLSDKPLDDGKRWVVVKPQGAEGGALLLAEADGEQQRLAIGNQTGGR VGFFLHTDDFARDYETMIARGVHFLEEPRHEVYGSVAVFADPYGNRWDLLQPRG
Sequences:
>Translated_134_residues MSFSENRRIALVTLVVDNYDRAKAFYCDVLGFECLSDKPLDDGKRWVVVKPQGAEGGALLLAEADGEQQRLAIGNQTGGR VGFFLHTDDFARDYETMIARGVHFLEEPRHEVYGSVAVFADPYGNRWDLLQPRG >Mature_133_residues SFSENRRIALVTLVVDNYDRAKAFYCDVLGFECLSDKPLDDGKRWVVVKPQGAEGGALLLAEADGEQQRLAIGNQTGGRV GFFLHTDDFARDYETMIARGVHFLEEPRHEVYGSVAVFADPYGNRWDLLQPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywkD [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 15025; Mature: 14894
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSENRRIALVTLVVDNYDRAKAFYCDVLGFECLSDKPLDDGKRWVVVKPQGAEGGALL CCCCCCCEEEEEEEEECCCCCCCEEEEECCCCHHCCCCCCCCCCEEEEEECCCCCCCEEE LAEADGEQQRLAIGNQTGGRVGFFLHTDDFARDYETMIARGVHFLEEPRHEVYGSVAVFA EEECCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEEE DPYGNRWDLLQPRG CCCCCCCCCCCCCC >Mature Secondary Structure SFSENRRIALVTLVVDNYDRAKAFYCDVLGFECLSDKPLDDGKRWVVVKPQGAEGGALL CCCCCCEEEEEEEEECCCCCCCEEEEECCCCHHCCCCCCCCCCEEEEEECCCCCCCEEE LAEADGEQQRLAIGNQTGGRVGFFLHTDDFARDYETMIARGVHFLEEPRHEVYGSVAVFA EEECCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEEE DPYGNRWDLLQPRG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]