Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887659
Identifier: 15887659
GI number: 15887659
Start: 301550
End: 302062
Strand: Direct
Name: 15887659
Synonym: Atu0309
Alternate gene names: NA
Gene position: 301550-302062 (Clockwise)
Preceding gene: 15887658
Following gene: 159184250
Centisome position: 10.61
GC content: 61.01
Gene sequence:
>513_bases ATGTCGTTCAAAATGATGTTCGCGGCGGCTGCAACCATGGCAATCCGAACGGTGCCGATATTGCCGGCCTATCTGCGCAG ACAAAAAGACGAAGCGGTCGTCAGCGCTTCCTGCACCGATCTGCGGCTTCAGCCGGCCCCCATCAATCCGGAATGGATCA TCTCCGGCAACCCTCAAGCCCGCGCGGCGGATCACTCCAGAAGTGGCGACCGTGCCTCCAGCACAGCCATGTGGGATTGC ACGGCCGGCGAATTCCGCTGGTTTTTCGGCTGGGATGAAACCGTCTATATTCTGGAAGGCGAAGTGCATGTGACGGCCGA AGACGGTTCGGTCAGCATCCTCAGGGTGGGGGACGTCGCCTATTTCCGGGCTGGAACCTGGGCCACGTGGCGGGTGGACG ACTATGTCCGCAAGGTCGCCTTCATGCGCCGCCCGTTTCCCACGGCACTGGCTTTGGCCTATCGCGTCAAGAACAAGCTG TTTGCCGGCCGCTCCTATAAGCTGGCGGCGTGA
Upstream 100 bases:
>100_bases AGAAATCGGCGCGATGACTAAAATTGCGCCGATTGTCAAAACCGCTTTGTTACGATCCCGATGATAGAAGACCTCCAATA TTTCACGGGGGTTTTTTCAT
Downstream 100 bases:
>100_bases ACCCTGTCTTCACCCCCGGCCGGCGGGCCTGTGCTGCTCCGCCGGCGCAATTGTGAAGGTTCAATAAAACTCACACGAAC CATCGCTTGCAGCAGTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSFKMMFAAAATMAIRTVPILPAYLRRQKDEAVVSASCTDLRLQPAPINPEWIISGNPQARAADHSRSGDRASSTAMWDC TAGEFRWFFGWDETVYILEGEVHVTAEDGSVSILRVGDVAYFRAGTWATWRVDDYVRKVAFMRRPFPTALALAYRVKNKL FAGRSYKLAA
Sequences:
>Translated_170_residues MSFKMMFAAAATMAIRTVPILPAYLRRQKDEAVVSASCTDLRLQPAPINPEWIISGNPQARAADHSRSGDRASSTAMWDC TAGEFRWFFGWDETVYILEGEVHVTAEDGSVSILRVGDVAYFRAGTWATWRVDDYVRKVAFMRRPFPTALALAYRVKNKL FAGRSYKLAA >Mature_169_residues SFKMMFAAAATMAIRTVPILPAYLRRQKDEAVVSASCTDLRLQPAPINPEWIISGNPQARAADHSRSGDRASSTAMWDCT AGEFRWFFGWDETVYILEGEVHVTAEDGSVSILRVGDVAYFRAGTWATWRVDDYVRKVAFMRRPFPTALALAYRVKNKLF AGRSYKLAA
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19076; Mature: 18945
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKMMFAAAATMAIRTVPILPAYLRRQKDEAVVSASCTDLRLQPAPINPEWIISGNPQA CCEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCC RAADHSRSGDRASSTAMWDCTAGEFRWFFGWDETVYILEGEVHVTAEDGSVSILRVGDVA CCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECEEEEEECCCCEEEEEECCEE YFRAGTWATWRVDDYVRKVAFMRRPFPTALALAYRVKNKLFAGRSYKLAA EEECCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure SFKMMFAAAATMAIRTVPILPAYLRRQKDEAVVSASCTDLRLQPAPINPEWIISGNPQA CEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCC RAADHSRSGDRASSTAMWDCTAGEFRWFFGWDETVYILEGEVHVTAEDGSVSILRVGDVA CCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECEEEEEECCCCEEEEEECCEE YFRAGTWATWRVDDYVRKVAFMRRPFPTALALAYRVKNKLFAGRSYKLAA EEECCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA