Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is bacA
Identifier: 15887643
GI number: 15887643
Start: 288790
End: 289596
Strand: Direct
Name: bacA
Synonym: Atu0294
Alternate gene names: 15887643
Gene position: 288790-289596 (Clockwise)
Preceding gene: 15887629
Following gene: 159184244
Centisome position: 10.16
GC content: 58.36
Gene sequence:
>807_bases ATGGGTGACCAATCGATCATCAGCGCGCTTTTGCTGGGCATTATCGAGGGTCTGACGGAGTTTATTCCCGTTTCCTCCAC GGCGCATGTGCTGCTGGCCGGGCATTTCCTTGGCTTTAAATCGCCGGGCAATACCTTTGCCGTCCTCATCCAGCTCGGTG CGATCCTCGCAATCCTTCTCGTTTATTTTCAAAAGCTTGTATCGATCGCCGTGGCGATGCCGACAAGTGCCAAGGCGCGC CGTTTTGTGCTGGCGGTTCTCGTCGCTTTCCTGCCGGCGGCGGTGATCGGCGCTCTCGCGCATGACTTCATCAAGACGGT GCTGTTCGAAACGCCGATGCTCATTTGTGTCGTGTTGATCATTGGTGGATTCATTTTGCTTGCGGTCGACCGGATGCCGC TGAAACCAAAATATACCGACATTATGGATTACCCGCCGTCGCTCGCCTTCAAGATCGGCCTTTTCCAGTGCCTTGCGATG ATTCCCGGCACCTCGCGGTCCGGCGCCACCATTGTCGGCGCGCTGCTGATGGGCACGGACAAGCGCTCCGCCGCCGAGTT TTCGTTTTTTCTGGCCATGCCGACCATGCTTGGCGCGTTTGTGCTCGACCTCTACAAGAACCGCGATGCGCTGAGCTTCG ATGATAGCGCCTTGATTGCCGTGGGGTTTGTGGCCGCCTTCGTGTCCGGCCTCTTCGTCGTGCGCTCGCTGCTGGATTTC GTGTCGCGACGTGGGTTTGCGCCCTTTGCCTGGTGGCGCATCGTCATCGGTGCGCTCGGTCTCGTCGCACTTCTGGTTAT CGGCTGA
Upstream 100 bases:
>100_bases TTTCGCTTCATCAAGACGCTATAAGAGCTTGGCTACTTTAAAACAAGTTTAACGCAATTGCTTTCCATTCACGCTTTCCC CCTTAAAAGAAGGATACCTC
Downstream 100 bases:
>100_bases CCCGCAGTTTCATATCGACCGAAAAACAAAAAAGCGCCCCGGAGAACCGGCGGCGCTTTTTTTAAACCTGTAAAGGCCGA TCAGTTGGCGCTGATCGAAG
Product: undecaprenyl pyrophosphate phosphatase
Products: NA
Alternate protein names: Bacitracin resistance protein 1; Undecaprenyl pyrophosphate phosphatase 1
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MGDQSIISALLLGIIEGLTEFIPVSSTAHVLLAGHFLGFKSPGNTFAVLIQLGAILAILLVYFQKLVSIAVAMPTSAKAR RFVLAVLVAFLPAAVIGALAHDFIKTVLFETPMLICVVLIIGGFILLAVDRMPLKPKYTDIMDYPPSLAFKIGLFQCLAM IPGTSRSGATIVGALLMGTDKRSAAEFSFFLAMPTMLGAFVLDLYKNRDALSFDDSALIAVGFVAAFVSGLFVVRSLLDF VSRRGFAPFAWWRIVIGALGLVALLVIG
Sequences:
>Translated_268_residues MGDQSIISALLLGIIEGLTEFIPVSSTAHVLLAGHFLGFKSPGNTFAVLIQLGAILAILLVYFQKLVSIAVAMPTSAKAR RFVLAVLVAFLPAAVIGALAHDFIKTVLFETPMLICVVLIIGGFILLAVDRMPLKPKYTDIMDYPPSLAFKIGLFQCLAM IPGTSRSGATIVGALLMGTDKRSAAEFSFFLAMPTMLGAFVLDLYKNRDALSFDDSALIAVGFVAAFVSGLFVVRSLLDF VSRRGFAPFAWWRIVIGALGLVALLVIG >Mature_267_residues GDQSIISALLLGIIEGLTEFIPVSSTAHVLLAGHFLGFKSPGNTFAVLIQLGAILAILLVYFQKLVSIAVAMPTSAKARR FVLAVLVAFLPAAVIGALAHDFIKTVLFETPMLICVVLIIGGFILLAVDRMPLKPKYTDIMDYPPSLAFKIGLFQCLAMI PGTSRSGATIVGALLMGTDKRSAAEFSFFLAMPTMLGAFVLDLYKNRDALSFDDSALIAVGFVAAFVSGLFVVRSLLDFV SRRGFAPFAWWRIVIGALGLVALLVIG
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family
Homologues:
Organism=Escherichia coli, GI1789437, Length=264, Percent_Identity=42.0454545454545, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UPPP1_AGRT5 (P58740)
Other databases:
- EMBL: AE007869 - PIR: AF2612 - PIR: D97394 - RefSeq: NP_353324.1 - STRING: P58740 - GeneID: 1132332 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0294 - eggNOG: COG1968 - HOGENOM: HBG391969 - OMA: IGHFIGF - PhylomeDB: P58740 - ProtClustDB: PRK00281 - BioCyc: ATUM176299-1:ATU0294-MONOMER - GO: GO:0016311 - HAMAP: MF_01006 - InterPro: IPR003824 - TIGRFAMs: TIGR00753
Pfam domain/function: PF02673 BacA
EC number: =3.6.1.27
Molecular weight: Translated: 28616; Mature: 28485
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb1466f4)-; HASH(0xcdc6144)-; HASH(0xcdcc858)-; HASH(0xcdcca38)-; HASH(0xcdcc9c0)-; HASH(0xcdc81b4)-; HASH(0xcdc11f0)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDQSIISALLLGIIEGLTEFIPVSSTAHVLLAGHFLGFKSPGNTFAVLIQLGAILAILL CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VYFQKLVSIAVAMPTSAKARRFVLAVLVAFLPAAVIGALAHDFIKTVLFETPMLICVVLI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGFILLAVDRMPLKPKYTDIMDYPPSLAFKIGLFQCLAMIPGTSRSGATIVGALLMGTD HHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC KRSAAEFSFFLAMPTMLGAFVLDLYKNRDALSFDDSALIAVGFVAAFVSGLFVVRSLLDF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSRRGFAPFAWWRIVIGALGLVALLVIG HHHCCCCHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure GDQSIISALLLGIIEGLTEFIPVSSTAHVLLAGHFLGFKSPGNTFAVLIQLGAILAILL CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VYFQKLVSIAVAMPTSAKARRFVLAVLVAFLPAAVIGALAHDFIKTVLFETPMLICVVLI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGFILLAVDRMPLKPKYTDIMDYPPSLAFKIGLFQCLAMIPGTSRSGATIVGALLMGTD HHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC KRSAAEFSFFLAMPTMLGAFVLDLYKNRDALSFDDSALIAVGFVAAFVSGLFVVRSLLDF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSRRGFAPFAWWRIVIGALGLVALLVIG HHHCCCCHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194