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The map label for this gene is 15887627

Identifier: 15887627

GI number: 15887627

Start: 272904

End: 273791

Strand: Reverse

Name: 15887627

Synonym: Atu0278

Alternate gene names: NA

Gene position: 273791-272904 (Counterclockwise)

Preceding gene: 15887630

Following gene: 15887626

Centisome position: 9.64

GC content: 55.41

Gene sequence:

>888_bases
ATGCGCGATACCTACCAATTAGTAGGTAGATTGTCAATGGTGCCGTGTCATAAGGCTATCGATCTTTCCGGCATGCGGCG
CGGACACCGCAATTCGTTCTCTTTTTGTTCTTTTAATTTCTCATTGGCGATGATAATGTCGCGAGCTTGGAATAGACCGT
GGAGCATCGTCATGGGTTTGGAGTTGACGGATAAAGAAGGGTTGAGGCAGCTTTTCCTTGAAGGGTTCGAGCTGGAGAAA
CAACGCCGGATCAATCCGCGATTTAGCAGCAAGGTTCTGATCGTGGTGAAACCGCCGGCGGCCTTGGCGGAGAGAATTTT
CACCGATGCGTCGAGCCATGCCGCAGGGCGGACGAAGCGTGAGGCCTATCCTGCGGAGCTTCTGCATATCACCCTGCTCT
GTGTCGGGTGTTTCGACACCGTGCCTCGCGGCCTGGCAAACCGGCTGAAGGAAGCACTGGGGGAGATAAGGGCGCGGCCC
GTTCCGATCACATTCGATGGGAGTTCGCTTTTCGGCAATCGCAACTGTCTGGTGCTAAACAGCCGCCGCGAGATGCTGGA
GCTCAGGGCTTTGGCGAAGGTGGTGCAGCGCGCCCTCTGGCGGGCAAATCTTCCCTATATCGCCGCATCATCGTTTATGC
CGCACCTGACTATGATCTATGGCTGCGGGAAAATCGAAACCATGCCGGTTGAAAAACCCTATAGCTGGCTGGCAGGCAGT
TTCGAAGTCATCTTCAGCCATAATGGGGAAACGCGGCACGAGTCCCTGGGACGCTTCGCGCTTTCCGCGAAGGCGGACCG
CTACGAGCAGCCGGAGAGTCAATTATATCTGCCGCAAAAAGTATTCGGTCCATCGAAGCGGCCAACCCATAAGATAGCGG
CGCGATAA

Upstream 100 bases:

>100_bases
CTGGGAGATATCCGCGTAGCTGAAACTGTTATAGCCACCTCTTATGATCAGGGTGCGTGCGCACTGGAGAATATCATCGG
CTTTGCTTTGAGGGTTTTTC

Downstream 100 bases:

>100_bases
GGTGGGGCCAAAAAAGCGTGGCTCCCATGCCCGAAATTATCCGCCTCCGCTGCTGGGCAACTATACGAACAAAGGCGCAG
TTCAAATCATCCGAGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRDTYQLVGRLSMVPCHKAIDLSGMRRGHRNSFSFCSFNFSLAMIMSRAWNRPWSIVMGLELTDKEGLRQLFLEGFELEK
QRRINPRFSSKVLIVVKPPAALAERIFTDASSHAAGRTKREAYPAELLHITLLCVGCFDTVPRGLANRLKEALGEIRARP
VPITFDGSSLFGNRNCLVLNSRREMLELRALAKVVQRALWRANLPYIAASSFMPHLTMIYGCGKIETMPVEKPYSWLAGS
FEVIFSHNGETRHESLGRFALSAKADRYEQPESQLYLPQKVFGPSKRPTHKIAAR

Sequences:

>Translated_295_residues
MRDTYQLVGRLSMVPCHKAIDLSGMRRGHRNSFSFCSFNFSLAMIMSRAWNRPWSIVMGLELTDKEGLRQLFLEGFELEK
QRRINPRFSSKVLIVVKPPAALAERIFTDASSHAAGRTKREAYPAELLHITLLCVGCFDTVPRGLANRLKEALGEIRARP
VPITFDGSSLFGNRNCLVLNSRREMLELRALAKVVQRALWRANLPYIAASSFMPHLTMIYGCGKIETMPVEKPYSWLAGS
FEVIFSHNGETRHESLGRFALSAKADRYEQPESQLYLPQKVFGPSKRPTHKIAAR
>Mature_295_residues
MRDTYQLVGRLSMVPCHKAIDLSGMRRGHRNSFSFCSFNFSLAMIMSRAWNRPWSIVMGLELTDKEGLRQLFLEGFELEK
QRRINPRFSSKVLIVVKPPAALAERIFTDASSHAAGRTKREAYPAELLHITLLCVGCFDTVPRGLANRLKEALGEIRARP
VPITFDGSSLFGNRNCLVLNSRREMLELRALAKVVQRALWRANLPYIAASSFMPHLTMIYGCGKIETMPVEKPYSWLAGS
FEVIFSHNGETRHESLGRFALSAKADRYEQPESQLYLPQKVFGPSKRPTHKIAAR

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33442; Mature: 33442

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDTYQLVGRLSMVPCHKAIDLSGMRRGHRNSFSFCSFNFSLAMIMSRAWNRPWSIVMGL
CCCHHHHHHHHHCCCCHHHHCHHHHCCCCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEE
ELTDKEGLRQLFLEGFELEKQRRINPRFSSKVLIVVKPPAALAERIFTDASSHAAGRTKR
EECCHHHHHHHHHHCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHH
EAYPAELLHITLLCVGCFDTVPRGLANRLKEALGEIRARPVPITFDGSSLFGNRNCLVLN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCEEEEC
SRREMLELRALAKVVQRALWRANLPYIAASSFMPHLTMIYGCGKIETMPVEKPYSWLAGS
CHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCHHHHHHCCCCCEEECCCCCCHHHHCCC
FEVIFSHNGETRHESLGRFALSAKADRYEQPESQLYLPQKVFGPSKRPTHKIAAR
EEEEEECCCCHHHHHHHHHHHHCCCHHCCCCHHHEECCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDTYQLVGRLSMVPCHKAIDLSGMRRGHRNSFSFCSFNFSLAMIMSRAWNRPWSIVMGL
CCCHHHHHHHHHCCCCHHHHCHHHHCCCCCCCCEEEEECHHHHHHHHHHCCCCEEEEEEE
ELTDKEGLRQLFLEGFELEKQRRINPRFSSKVLIVVKPPAALAERIFTDASSHAAGRTKR
EECCHHHHHHHHHHCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHH
EAYPAELLHITLLCVGCFDTVPRGLANRLKEALGEIRARPVPITFDGSSLFGNRNCLVLN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCEEEEC
SRREMLELRALAKVVQRALWRANLPYIAASSFMPHLTMIYGCGKIETMPVEKPYSWLAGS
CHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCHHHHHHCCCCCEEECCCCCCHHHHCCC
FEVIFSHNGETRHESLGRFALSAKADRYEQPESQLYLPQKVFGPSKRPTHKIAAR
EEEEEECCCCHHHHHHHHHHHHCCCHHCCCCHHHEECCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA