Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887594
Identifier: 15887594
GI number: 15887594
Start: 243482
End: 243883
Strand: Direct
Name: 15887594
Synonym: Atu8117
Alternate gene names: NA
Gene position: 243482-243883 (Clockwise)
Preceding gene: 15887590
Following gene: 159184228
Centisome position: 8.57
GC content: 57.46
Gene sequence:
>402_bases ATGACCGCTGCCGAGACCATCCGCGCCTATTACGATGCCTTCAACCGCCAGGACATGGATGCCTTCCTGGCGCTGCTTCA CGATGAGGTGGTACATGACATCAATCAGGGCGAGCGCCAGACCGGCAAGGCCGCCTTCGCCTCCTTCATGGATCATATGA ACCGCTGCTACCGGGAAAACCTCACGGACATGGTGATCATGGCGAGCGAAGACGGCAAACGCGCATCCGCTGAATTCGTC GTGAACGGGGAATATCTCAAAACCGATGAGGGCTTGCCGGAAGCGAACGGTCAGAAATACGTGCTGCCGGCCGGCGCCTT CTTCGACCTGAAGGACGGGAAAGTTAGCCGAGTAACAAACTACTATAATCTGAACGACTGGATCGCCCAGGTCGGCGCCT GA
Upstream 100 bases:
>100_bases CGGAAAGAGACTTGATTTCGACGGTCATGGGCATTTTCACTCTCGGTTGTACTGGTTATATCGTCATGGAACACCCGCGC AAGCATGAACGGAGAAGACG
Downstream 100 bases:
>100_bases ACCGTCATTTGCCAGGCGGAACCGGCCGCAAAGAGGCAATCATAATTTCCATTATCGTGGATATTGACTCCATCATATGA GAATAATAATCATCATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTAAETIRAYYDAFNRQDMDAFLALLHDEVVHDINQGERQTGKAAFASFMDHMNRCYRENLTDMVIMASEDGKRASAEFV VNGEYLKTDEGLPEANGQKYVLPAGAFFDLKDGKVSRVTNYYNLNDWIAQVGA
Sequences:
>Translated_133_residues MTAAETIRAYYDAFNRQDMDAFLALLHDEVVHDINQGERQTGKAAFASFMDHMNRCYRENLTDMVIMASEDGKRASAEFV VNGEYLKTDEGLPEANGQKYVLPAGAFFDLKDGKVSRVTNYYNLNDWIAQVGA >Mature_132_residues TAAETIRAYYDAFNRQDMDAFLALLHDEVVHDINQGERQTGKAAFASFMDHMNRCYRENLTDMVIMASEDGKRASAEFVV NGEYLKTDEGLPEANGQKYVLPAGAFFDLKDGKVSRVTNYYNLNDWIAQVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14986; Mature: 14855
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAETIRAYYDAFNRQDMDAFLALLHDEVVHDINQGERQTGKAAFASFMDHMNRCYREN CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC LTDMVIMASEDGKRASAEFVVNGEYLKTDEGLPEANGQKYVLPAGAFFDLKDGKVSRVTN CCEEEEEECCCCCCCCCEEEECCCEEECCCCCCCCCCCEEEECCCCEEECCCCCEEHHHC YYNLNDWIAQVGA CCCHHHHHHHHCC >Mature Secondary Structure TAAETIRAYYDAFNRQDMDAFLALLHDEVVHDINQGERQTGKAAFASFMDHMNRCYREN CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC LTDMVIMASEDGKRASAEFVVNGEYLKTDEGLPEANGQKYVLPAGAFFDLKDGKVSRVTN CCEEEEEECCCCCCCCCEEEECCCEEECCCCCCCCCCCEEEECCCCEEECCCCCEEHHHC YYNLNDWIAQVGA CCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA