Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is catB2 [H]
Identifier: 15887529
GI number: 15887529
Start: 179560
End: 180177
Strand: Reverse
Name: catB2 [H]
Synonym: Atu0175
Alternate gene names: 15887529
Gene position: 180177-179560 (Counterclockwise)
Preceding gene: 159184198
Following gene: 159184197
Centisome position: 6.34
GC content: 61.49
Gene sequence:
>618_bases ATGAGTGTCAAGGTCGGTCTCGAACCCGTCATCCATGAAAGTGCCCGCGTCACCAATTCTTCGATCGGCCGCTATACCGA AATTTCGGAGCGCTGCCGCCTCGAGGAGGTCGAGATGGGCGACTACTCCTACGTCATGCAGGATGGCGCAATCTGGTGTG CCACCATCGGCAAATTCGTCAACATCGCCGCTTCCGTCCGCATCAATGCCACCAATCATCCGATGCAGCGGGCCACATTG CACCATTTCACCTATCGCGCCCGCAGCTACTGGGACGACGCCGAAGATGAAACTGACTTCTTCGCCGCCCGCCGCGCCAA ACGGGTGGTGATCGGCCACGATGTCTGGATCGGCCATGGTGCGACCATCCTGCCCGGCATCACGGTGGGGAACGGTGCAG TCATCGGGGCCGGGGCGGTCGTTTCCAAAGATGTTGCGCCCTACACCATCGTCGGCGGCGTGCCCGCCCGGCTGATCCGC GAGCGTTTTCCCGCGGAGCTTGGCAAGCGCATGGATGATCTGAATTGGTGGGATTGGGACCATGCGAGGCTGCGCAGCGC GCTGGAGGATTTCCGCGCACTCGACGCCGAGGATTTCGTGGCGAAATATGGCGGATGA
Upstream 100 bases:
>100_bases GCACCGCGCTGCTCGGCATCTTCCACGACGAGGAGGTGCGCGAAGCCGTGGCTGACCGCATTCTCGACGTTTCGCAATTC TCTCCGCGGAAGGCAGCGGC
Downstream 100 bases:
>100_bases ACTCCGCTTATCCCGAAGCAATTGCATTCCCGGGGCCATGTCCCGGGATTTCTGTTTGTCGGCTCCCACCGCATGACAAG CCTGACGAAGGTTTGTCGGC
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSVKVGLEPVIHESARVTNSSIGRYTEISERCRLEEVEMGDYSYVMQDGAIWCATIGKFVNIAASVRINATNHPMQRATL HHFTYRARSYWDDAEDETDFFAARRAKRVVIGHDVWIGHGATILPGITVGNGAVIGAGAVVSKDVAPYTIVGGVPARLIR ERFPAELGKRMDDLNWWDWDHARLRSALEDFRALDAEDFVAKYGG
Sequences:
>Translated_205_residues MSVKVGLEPVIHESARVTNSSIGRYTEISERCRLEEVEMGDYSYVMQDGAIWCATIGKFVNIAASVRINATNHPMQRATL HHFTYRARSYWDDAEDETDFFAARRAKRVVIGHDVWIGHGATILPGITVGNGAVIGAGAVVSKDVAPYTIVGGVPARLIR ERFPAELGKRMDDLNWWDWDHARLRSALEDFRALDAEDFVAKYGG >Mature_204_residues SVKVGLEPVIHESARVTNSSIGRYTEISERCRLEEVEMGDYSYVMQDGAIWCATIGKFVNIAASVRINATNHPMQRATLH HFTYRARSYWDDAEDETDFFAARRAKRVVIGHDVWIGHGATILPGITVGNGAVIGAGAVVSKDVAPYTIVGGVPARLIRE RFPAELGKRMDDLNWWDWDHARLRSALEDFRALDAEDFVAKYGG
Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786537, Length=110, Percent_Identity=35.4545454545455, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788345, Length=127, Percent_Identity=31.496062992126, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1786664, Length=59, Percent_Identity=50.8474576271186, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.28 [H]
Molecular weight: Translated: 22853; Mature: 22722
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKVGLEPVIHESARVTNSSIGRYTEISERCRLEEVEMGDYSYVMQDGAIWCATIGKFV CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHCCCCCEEEEHCCCCCHHHHHHHHH NIAASVRINATNHPMQRATLHHFTYRARSYWDDAEDETDFFAARRAKRVVIGHDVWIGHG HHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEECEEEECCC ATILPGITVGNGAVIGAGAVVSKDVAPYTIVGGVPARLIRERFPAELGKRMDDLNWWDWD CEECCCEEECCCCEEECCHHHHCCCCCEEEECCCHHHHHHHHCCHHHHHHHCCCCCCCCH HARLRSALEDFRALDAEDFVAKYGG HHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure SVKVGLEPVIHESARVTNSSIGRYTEISERCRLEEVEMGDYSYVMQDGAIWCATIGKFV CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHCCCCCEEEEHCCCCCHHHHHHHHH NIAASVRINATNHPMQRATLHHFTYRARSYWDDAEDETDFFAARRAKRVVIGHDVWIGHG HHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEECEEEECCC ATILPGITVGNGAVIGAGAVVSKDVAPYTIVGGVPARLIRERFPAELGKRMDDLNWWDWD CEECCCEEECCCCEEECCHHHHCCCCCEEEECCCHHHHHHHHCCHHHHHHHCCCCCCCCH HARLRSALEDFRALDAEDFVAKYGG HHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1314803 [H]