Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is tauA [C]
Identifier: 15887512
GI number: 15887512
Start: 163006
End: 164007
Strand: Direct
Name: tauA [C]
Synonym: Atu0157
Alternate gene names: 15887512
Gene position: 163006-164007 (Clockwise)
Preceding gene: 15887510
Following gene: 15887513
Centisome position: 5.74
GC content: 55.89
Gene sequence:
>1002_bases ATGCCTCAAATAAAGCGAAAAAAATATCGCACAAAAATAAATCAAAAAGGGGTTCCGATCATGAAAAGAACATGGGTTAT CGCCGCAATCGCGACGCTTGTTTCGTCTGCTTCCGCCTATGCCGAAACGGCCGTGACCATCGGCATGTCCGGCTGGACCG GCTTTGCACCGCTGACGCTTGCCAAGCAGGCCGGCATTTTCGAAAAGAACGGCCTGAAGGTCGATATCAAGAAGATACCC CAGGCCAGCCGCCATCTCGCCCTTGCTTCCGGTGACATTCAGTGCGCGGCCACGACGGTGGAAACATGGATCGCTTGGAA CGCCAATGGCGTGAAATCCACCCAGATTTTCCAGATGGACAAATCGCACGGTGCCGATGGCATCGCGGTGCGCAGCGATG TCTCTAAGGTCGCGGACCTCAAGGGCAAGACCGTCGCCGCTTCCGCGCCGGGTACCTCCCCTTATTTCTTCCTTGCCTGG ATTCTCAAGGAAAACGGCCTGACGCTGAAGGATGTGAAGGTCGTCAACCTTGAGCCGGGACCGGCAGCACAGGCTTTCGT CGCCGGCCAGAATGATGCGGCCATGACCTATGAGCCTTATCTGTCCACCGTGCGTGCCGCACCGGACAAGGGCAAGATTC TCGCCACGACGCTGGATTATCCTGCGGTCATGGATACTTTCGGTTGCACACCGGACTTCCTGAAGGCCAATCCGCAGGCG GCCAAGGCGCTGGCGGACAGTTATTTCCAGGCATTGGAACTCATCAAGGCCGACCCGGAAAAATCCTATGCGACGATGGG CGCGGATGTGAAACAGGCGGGCGAGGCTTTCGCCGCTTCGGCAAAATTCCTCGAATGGCAGGACAAGGCCGCCAACCAGA AATTCTTCGAGGGTGAATTCAAGACGTTCTCCGAAAAGTCGGCGGATCTGCTGCTTGAAATTGGCGTGATAAAGTCGAAA CCCGATCTTTCGACACTCGCGGATACGTCTTTCATCAAGTGA
Upstream 100 bases:
>100_bases TTATCCTATGTCTAGAATGCCGGGCGGTCCGTTTGCAATCTTTCTGGAAGCGTTTCAGTACCTCTATTTTGTCTAGACAA ATGTAAAATCCCTGCCTAGC
Downstream 100 bases:
>100_bases GAGAAAAGGCGGCGACAGCCCTGCGGGGAATGCGCAGCCAGTGATAATTTGAGAGCGCCGATTGTGTGCCCTGAAAGGCA TGCGGTGCTCTGATGGCGCG
Product: ABC transporter, substrate binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5-Like Domain-Containing Protein; NLPA Lipoprotein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; NlpA Lipoprotein; Signal Peptide Protein; Amino Acid ABC Transporter; NMT1/THI5 Like Family; Taurine Transport System Protein
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPQIKRKKYRTKINQKGVPIMKRTWVIAAIATLVSSASAYAETAVTIGMSGWTGFAPLTLAKQAGIFEKNGLKVDIKKIP QASRHLALASGDIQCAATTVETWIAWNANGVKSTQIFQMDKSHGADGIAVRSDVSKVADLKGKTVAASAPGTSPYFFLAW ILKENGLTLKDVKVVNLEPGPAAQAFVAGQNDAAMTYEPYLSTVRAAPDKGKILATTLDYPAVMDTFGCTPDFLKANPQA AKALADSYFQALELIKADPEKSYATMGADVKQAGEAFAASAKFLEWQDKAANQKFFEGEFKTFSEKSADLLLEIGVIKSK PDLSTLADTSFIK
Sequences:
>Translated_333_residues MPQIKRKKYRTKINQKGVPIMKRTWVIAAIATLVSSASAYAETAVTIGMSGWTGFAPLTLAKQAGIFEKNGLKVDIKKIP QASRHLALASGDIQCAATTVETWIAWNANGVKSTQIFQMDKSHGADGIAVRSDVSKVADLKGKTVAASAPGTSPYFFLAW ILKENGLTLKDVKVVNLEPGPAAQAFVAGQNDAAMTYEPYLSTVRAAPDKGKILATTLDYPAVMDTFGCTPDFLKANPQA AKALADSYFQALELIKADPEKSYATMGADVKQAGEAFAASAKFLEWQDKAANQKFFEGEFKTFSEKSADLLLEIGVIKSK PDLSTLADTSFIK >Mature_332_residues PQIKRKKYRTKINQKGVPIMKRTWVIAAIATLVSSASAYAETAVTIGMSGWTGFAPLTLAKQAGIFEKNGLKVDIKKIPQ ASRHLALASGDIQCAATTVETWIAWNANGVKSTQIFQMDKSHGADGIAVRSDVSKVADLKGKTVAASAPGTSPYFFLAWI LKENGLTLKDVKVVNLEPGPAAQAFVAGQNDAAMTYEPYLSTVRAAPDKGKILATTLDYPAVMDTFGCTPDFLKANPQAA KALADSYFQALELIKADPEKSYATMGADVKQAGEAFAASAKFLEWQDKAANQKFFEGEFKTFSEKSADLLLEIGVIKSKP DLSTLADTSFIK
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081727, Length=248, Percent_Identity=28.6290322580645, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35773; Mature: 35642
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQIKRKKYRTKINQKGVPIMKRTWVIAAIATLVSSASAYAETAVTIGMSGWTGFAPLTL CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHH AKQAGIFEKNGLKVDIKKIPQASRHLALASGDIQCAATTVETWIAWNANGVKSTQIFQMD HHHCCCEECCCCEEEHHHCCCCHHEEEEECCCCEEEEEEEEEEEEECCCCCCCEEEEEEC KSHGADGIAVRSDVSKVADLKGKTVAASAPGTSPYFFLAWILKENGLTLKDVKVVNLEPG CCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCC PAAQAFVAGQNDAAMTYEPYLSTVRAAPDKGKILATTLDYPAVMDTFGCTPDFLKANPQA CCCEEEEECCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCHHHHCCCHHH AKALADSYFQALELIKADPEKSYATMGADVKQAGEAFAASAKFLEWQDKAANQKFFEGEF HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHH KTFSEKSADLLLEIGVIKSKPDLSTLADTSFIK HHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCC >Mature Secondary Structure PQIKRKKYRTKINQKGVPIMKRTWVIAAIATLVSSASAYAETAVTIGMSGWTGFAPLTL CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHH AKQAGIFEKNGLKVDIKKIPQASRHLALASGDIQCAATTVETWIAWNANGVKSTQIFQMD HHHCCCEECCCCEEEHHHCCCCHHEEEEECCCCEEEEEEEEEEEEECCCCCCCEEEEEEC KSHGADGIAVRSDVSKVADLKGKTVAASAPGTSPYFFLAWILKENGLTLKDVKVVNLEPG CCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEECCC PAAQAFVAGQNDAAMTYEPYLSTVRAAPDKGKILATTLDYPAVMDTFGCTPDFLKANPQA CCCEEEEECCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCHHHHCCCHHH AKALADSYFQALELIKADPEKSYATMGADVKQAGEAFAASAKFLEWQDKAANQKFFEGEF HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHH KTFSEKSADLLLEIGVIKSKPDLSTLADTSFIK HHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA