Click here to switch to the map view.

The map label for this gene is yjhC [C]

Identifier: 158423972

GI number: 158423972

Start: 2673504

End: 2674688

Strand: Reverse

Name: yjhC [C]

Synonym: AZC_2348

Alternate gene names: 158423972

Gene position: 2674688-2673504 (Counterclockwise)

Preceding gene: 158423973

Following gene: 158423971

Centisome position: 49.81

GC content: 65.4

Gene sequence:

>1185_bases
ATGACCCAGAAGCGCCTCGGCCTCATCATGAACGGCATCACCGGGCGAATGGGGCTGAACCAGCACCTCATCCGCTCCGT
GGTGGCCATCCGCGCGCAGGGGGGCGTGCCCCTTTCCGACGGCACGAAAGTGCAGCTCGATCCCATCCTCATCGGCCGCA
ATGCGGACAAGGTGGAAGGGCTCGCGAAGCAGTATGGCATCGAGCGCTGGGGCACGGACCTCGACGCCGCCCTGGCCGAT
CCCGGCAACGAAATCTTCTTCGACGCCGCCACCACCCAGATGCGTCCCATCCTGCTGGAAAAGGCCATCCGCGCCGGCAA
GCATGTCTATTGCGAGAAGCCCATCGCCACCAATCTGCCGGAAGCCGTCCGCATCTGCCGCCTCGCGGAGGAGAAGGGCG
TGAAGAACGGCGTGGTGCAGGACAAGCTCTTCCTGCCCGGCCTTCAGAAGCTCAAGCTGCTGCGGGATTCCGGCTTCTTC
GGCCGCATGATCTCGGTGCGCGGGGAGTTCGGTTACTGGGTGTTTGAGGGAGACTGGGGCCAGCCGGCGCAGCGCCCCTC
CTGGAATTACCGTTCGCAGGAGGGCGGCGGCATGATCCTCGATATGGTCTGCCACTGGCGCTACGTGCTGGACAATCTCT
TCGGCGAAGTGAAGTCGGTGTCCTGTCTCGGCGCGACCCACATCCCCTCCCGCGTGGACGAGCGCGGCCAGCCCTATGAG
GCGACGGCGGATGATGCCGCTTATGCCACCTTCGAGCTTCAGGACGGCGTGATCGCCCACATCAACATGTCCTGGTGCAC
CCGCGTCTATCGCGACGACCTGGTGACGTTCCAGGTGGACGGCACGCTGGGTTCGGCGGTGGCGGGGCTTTCGGACTGTG
TCTTCCAGTCCCGCGTCGGCACCCCGCGCCCGGTGTGGAACCCGGACCAGAAGCAGACCATGGACTTCTACAACCACTGG
CAGCCGGTGCCCGACACGGCGGTGTTCGACAACGGCTTCAAGGTGCAGTGGGAGATGTTCATCCGCCACGTGGTGGAGGA
TGCGCCCTATCGCTTCACGCTCCGCGAAGGCGCCAAGGGCGTGCAACTCGTGGAATGCGCGCTCCAGAGCTGGAAGGAGC
GCCGCTGGATCGACGTGCCGACGCTGGAAGCGTCCGAACGGGCCGTCCTGCAAGCCGCCGAGTGA

Upstream 100 bases:

>100_bases
TGCTCTCCGCCCCCGGCTTTGCCGGGCGGGCCGAACCCGACTGGGCGAGCCTTGCGCCCGTCACGCTTCCCGAAACCAGA
CTTCATCAGGAGATACCGGC

Downstream 100 bases:

>100_bases
GGGGCTGCACCTTCAGGCACGGCCGTCGTGTCCGGAGCTGGTCCGGGCATGACATCCCACCATCCGCGCACCTAGCCGAA
CCACGGTCATGGCCGGGACA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTQKRLGLIMNGITGRMGLNQHLIRSVVAIRAQGGVPLSDGTKVQLDPILIGRNADKVEGLAKQYGIERWGTDLDAALAD
PGNEIFFDAATTQMRPILLEKAIRAGKHVYCEKPIATNLPEAVRICRLAEEKGVKNGVVQDKLFLPGLQKLKLLRDSGFF
GRMISVRGEFGYWVFEGDWGQPAQRPSWNYRSQEGGGMILDMVCHWRYVLDNLFGEVKSVSCLGATHIPSRVDERGQPYE
ATADDAAYATFELQDGVIAHINMSWCTRVYRDDLVTFQVDGTLGSAVAGLSDCVFQSRVGTPRPVWNPDQKQTMDFYNHW
QPVPDTAVFDNGFKVQWEMFIRHVVEDAPYRFTLREGAKGVQLVECALQSWKERRWIDVPTLEASERAVLQAAE

Sequences:

>Translated_394_residues
MTQKRLGLIMNGITGRMGLNQHLIRSVVAIRAQGGVPLSDGTKVQLDPILIGRNADKVEGLAKQYGIERWGTDLDAALAD
PGNEIFFDAATTQMRPILLEKAIRAGKHVYCEKPIATNLPEAVRICRLAEEKGVKNGVVQDKLFLPGLQKLKLLRDSGFF
GRMISVRGEFGYWVFEGDWGQPAQRPSWNYRSQEGGGMILDMVCHWRYVLDNLFGEVKSVSCLGATHIPSRVDERGQPYE
ATADDAAYATFELQDGVIAHINMSWCTRVYRDDLVTFQVDGTLGSAVAGLSDCVFQSRVGTPRPVWNPDQKQTMDFYNHW
QPVPDTAVFDNGFKVQWEMFIRHVVEDAPYRFTLREGAKGVQLVECALQSWKERRWIDVPTLEASERAVLQAAE
>Mature_393_residues
TQKRLGLIMNGITGRMGLNQHLIRSVVAIRAQGGVPLSDGTKVQLDPILIGRNADKVEGLAKQYGIERWGTDLDAALADP
GNEIFFDAATTQMRPILLEKAIRAGKHVYCEKPIATNLPEAVRICRLAEEKGVKNGVVQDKLFLPGLQKLKLLRDSGFFG
RMISVRGEFGYWVFEGDWGQPAQRPSWNYRSQEGGGMILDMVCHWRYVLDNLFGEVKSVSCLGATHIPSRVDERGQPYEA
TADDAAYATFELQDGVIAHINMSWCTRVYRDDLVTFQVDGTLGSAVAGLSDCVFQSRVGTPRPVWNPDQKQTMDFYNHWQ
PVPDTAVFDNGFKVQWEMFIRHVVEDAPYRFTLREGAKGVQLVECALQSWKERRWIDVPTLEASERAVLQAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323975, Length=221, Percent_Identity=27.6018099547511, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 44207; Mature: 44076

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKRLGLIMNGITGRMGLNQHLIRSVVAIRAQGGVPLSDGTKVQLDPILIGRNADKVEG
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCHHHHH
LAKQYGIERWGTDLDAALADPGNEIFFDAATTQMRPILLEKAIRAGKHVYCEKPIATNLP
HHHHHCHHHCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCHHCCCH
EAVRICRLAEEKGVKNGVVQDKLFLPGLQKLKLLRDSGFFGRMISVRGEFGYWVFEGDWG
HHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCC
QPAQRPSWNYRSQEGGGMILDMVCHWRYVLDNLFGEVKSVSCLGATHIPSRVDERGQPYE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC
ATADDAAYATFELQDGVIAHINMSWCTRVYRDDLVTFQVDGTLGSAVAGLSDCVFQSRVG
CCCCCCEEEEEEECCCEEEEEEHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCC
TPRPVWNPDQKQTMDFYNHWQPVPDTAVFDNGFKVQWEMFIRHVVEDAPYRFTLREGAKG
CCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCEEHHHHHHHHHHHCCCEEEEECCCCCC
VQLVECALQSWKERRWIDVPTLEASERAVLQAAE
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
TQKRLGLIMNGITGRMGLNQHLIRSVVAIRAQGGVPLSDGTKVQLDPILIGRNADKVEG
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCHHHHH
LAKQYGIERWGTDLDAALADPGNEIFFDAATTQMRPILLEKAIRAGKHVYCEKPIATNLP
HHHHHCHHHCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCHHCCCH
EAVRICRLAEEKGVKNGVVQDKLFLPGLQKLKLLRDSGFFGRMISVRGEFGYWVFEGDWG
HHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCC
QPAQRPSWNYRSQEGGGMILDMVCHWRYVLDNLFGEVKSVSCLGATHIPSRVDERGQPYE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC
ATADDAAYATFELQDGVIAHINMSWCTRVYRDDLVTFQVDGTLGSAVAGLSDCVFQSRVG
CCCCCCEEEEEEECCCEEEEEEHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCC
TPRPVWNPDQKQTMDFYNHWQPVPDTAVFDNGFKVQWEMFIRHVVEDAPYRFTLREGAKG
CCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCEEHHHHHHHHHHHCCCEEEEECCCCCC
VQLVECALQSWKERRWIDVPTLEASERAVLQAAE
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]