Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423839
Identifier: 158423839
GI number: 158423839
Start: 2530629
End: 2531552
Strand: Direct
Name: 158423839
Synonym: AZC_2215
Alternate gene names: NA
Gene position: 2530629-2531552 (Clockwise)
Preceding gene: 158423838
Following gene: 158423840
Centisome position: 47.13
GC content: 64.72
Gene sequence:
>924_bases ATGGAAACCCGGGCCAATTACACCGTCATCGGCATCTTCACCCTCGCGGTGATCGCTGCGGCCTTTGTGTTCGTCTACTG GTTCGCCGGCCCCAAGGACAGCGACAAGCGCAAGCTCTATGAGGTCCTGTATCAGGGCTCGGTGAGCGGCCTGCGCGAAG GCAATGCCGTGCTGTTCAACGGCATTCCGGTCGGTCAGGTGACCAAGCTCGGCCTCGTTCCTGGCGCGCCCAACGAAGTG CTGGTGCAGATCGGCGTGCGCAATGACGTGCCGATTCTCGCCGATGCCCGCGCCAGCCTGGAATCGCAGGGCATCACCGG CATCGTCGCCGTGAGCATCCAGGGCGGCAACGCCAAGGCCGGTCCGATCCCGCCCGGCCCCAACGGACTTCCGCGCATCG AGGCGCTGGGTGGCACCGGCATGGCCGGCCTGCTCCAGAATGCCCAGGGCACGGTGGCGAAGGTCAACAGCATCCTCGAC GCCATCGACCCCGACCAGGTCAGGCAGATCGTCGCCAATGTCGAGAATGTCAGCAAGCAACTCTCTGACAATTCTGGCGA TATCGCCAGCATGATCAGCGGCGTGAAGGATGCCGTGGCGCAGGTCAACGAGATCGCCAAGAAGGTGGACGTGGTGGTGG TGAACCTCCAGCACGCCTCGGGCGACAAGGACGGCCTGCTCAATCAGGCGACCGAGGCCGCGACCGCGGTGCGCAAGCTG GCCGACAATCTCGACCAGCGCACGGCGCTGCTGACCAACGAGATCAGCCGCTTTACCGGGCCGGGCCTGAGACAGTACGA AGCCCTGGCGGCCGACGGCCGCCGGACCTTGACGGAGATCGAGCGCGTCTTCCGGAACCTGGAGCGTAACCCGCGCCAGT TCATCTTCGGGGGCAATTCGATCCCGGAATACAACAAGCGGTGA
Upstream 100 bases:
>100_bases ATCGAGACAATGATGGCGGCGCAACATCCCTGGTTGCGCGCTTATTTCCACGGCGCCCGTGCCCGGGCGGTTCAGGCAGC GCGCTAAGGCAGGACGAGGC
Downstream 100 bases:
>100_bases TGCCTGATGATGCGCGACAGTGGGGCTGAGGGGACGCAGCGTTTCGGCGTCGGTCGCGGGCGGGCCGTGCTGGGGGTGTT TCTCACCCTCGCGCTCGCCG
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues METRANYTVIGIFTLAVIAAAFVFVYWFAGPKDSDKRKLYEVLYQGSVSGLREGNAVLFNGIPVGQVTKLGLVPGAPNEV LVQIGVRNDVPILADARASLESQGITGIVAVSIQGGNAKAGPIPPGPNGLPRIEALGGTGMAGLLQNAQGTVAKVNSILD AIDPDQVRQIVANVENVSKQLSDNSGDIASMISGVKDAVAQVNEIAKKVDVVVVNLQHASGDKDGLLNQATEAATAVRKL ADNLDQRTALLTNEISRFTGPGLRQYEALAADGRRTLTEIERVFRNLERNPRQFIFGGNSIPEYNKR
Sequences:
>Translated_307_residues METRANYTVIGIFTLAVIAAAFVFVYWFAGPKDSDKRKLYEVLYQGSVSGLREGNAVLFNGIPVGQVTKLGLVPGAPNEV LVQIGVRNDVPILADARASLESQGITGIVAVSIQGGNAKAGPIPPGPNGLPRIEALGGTGMAGLLQNAQGTVAKVNSILD AIDPDQVRQIVANVENVSKQLSDNSGDIASMISGVKDAVAQVNEIAKKVDVVVVNLQHASGDKDGLLNQATEAATAVRKL ADNLDQRTALLTNEISRFTGPGLRQYEALAADGRRTLTEIERVFRNLERNPRQFIFGGNSIPEYNKR >Mature_307_residues METRANYTVIGIFTLAVIAAAFVFVYWFAGPKDSDKRKLYEVLYQGSVSGLREGNAVLFNGIPVGQVTKLGLVPGAPNEV LVQIGVRNDVPILADARASLESQGITGIVAVSIQGGNAKAGPIPPGPNGLPRIEALGGTGMAGLLQNAQGTVAKVNSILD AIDPDQVRQIVANVENVSKQLSDNSGDIASMISGVKDAVAQVNEIAKKVDVVVVNLQHASGDKDGLLNQATEAATAVRKL ADNLDQRTALLTNEISRFTGPGLRQYEALAADGRRTLTEIERVFRNLERNPRQFIFGGNSIPEYNKR
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005586 - InterPro: IPR003399 [H]
Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 32612; Mature: 32612
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRANYTVIGIFTLAVIAAAFVFVYWFAGPKDSDKRKLYEVLYQGSVSGLREGNAVLFN CCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEC GIPVGQVTKLGLVPGAPNEVLVQIGVRNDVPILADARASLESQGITGIVAVSIQGGNAKA CCCCCHHHEECCCCCCCCCEEEEEECCCCCCEEECCHHHHHHCCCEEEEEEEEECCCCCC GPIPPGPNGLPRIEALGGTGMAGLLQNAQGTVAKVNSILDAIDPDQVRQIVANVENVSKQ CCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSDNSGDIASMISGVKDAVAQVNEIAKKVDVVVVNLQHASGDKDGLLNQATEAATAVRKL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH ADNLDQRTALLTNEISRFTGPGLRQYEALAADGRRTLTEIERVFRNLERNPRQFIFGGNS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCC IPEYNKR CCCCCCC >Mature Secondary Structure METRANYTVIGIFTLAVIAAAFVFVYWFAGPKDSDKRKLYEVLYQGSVSGLREGNAVLFN CCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEC GIPVGQVTKLGLVPGAPNEVLVQIGVRNDVPILADARASLESQGITGIVAVSIQGGNAKA CCCCCHHHEECCCCCCCCCEEEEEECCCCCCEEECCHHHHHHCCCEEEEEEEEECCCCCC GPIPPGPNGLPRIEALGGTGMAGLLQNAQGTVAKVNSILDAIDPDQVRQIVANVENVSKQ CCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSDNSGDIASMISGVKDAVAQVNEIAKKVDVVVVNLQHASGDKDGLLNQATEAATAVRKL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH ADNLDQRTALLTNEISRFTGPGLRQYEALAADGRRTLTEIERVFRNLERNPRQFIFGGNS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCC IPEYNKR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275; 1551834 [H]