Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is mdeA [H]
Identifier: 158423804
GI number: 158423804
Start: 2496783
End: 2498066
Strand: Direct
Name: mdeA [H]
Synonym: AZC_2180
Alternate gene names: 158423804
Gene position: 2496783-2498066 (Clockwise)
Preceding gene: 158423803
Following gene: 158423806
Centisome position: 46.5
GC content: 65.89
Gene sequence:
>1284_bases ATGAGCGAACGCACGCCCGGTTTTTCCACCCTCGCCATTCACGCGGGGGCTCAGCCCGACCCCACCACCGGCGCGCGGGC AACGCCCATCTACCAGACCACCTCCTTCGTCTTCGACGACGTGGACCATGCGGCGGCGCTGTTCGGGCTCCAGACCTTCG GCAACATCTACACGCGCATCGGCAACCCGACCGTCGCTGTGCTGGAGGAGCGGGTGGCGGCGCTGGAAGGCGGCACGGCG GCGCTTGCGGTCGCATCCGGCCATGCGGCGCAGCATCTGGTGTTCCACACGCTGCTGACGTCTGGCGACGAATTCGTCGC CTCGCGCAAGCTCTATGGCGGCTCCATCAACCAGTTCAACCATGCCTTCAAGAGCTACGGCTGGAACGTCGCCTGGGCCG ATCCCGATAATGTCTCCAGCTTCGAGCGGGCCATCACGCCGAAGACCAAGGCGATCTTCATCGAGAGCCTCGCCAACCCC GGCGGCATCGTCACCGACATCAAGGCCATCTCGGCGGTCGCGAAGAAGGCAGGCATCCCGCTGATCGTCGATAACACGCT GGCGACGCCCTACCTCTGGCGGCCAATCGAGCATGGCGCGGACATCGTCATCCATTCCGCCACCAAGTTCCTGGGCGGTC ACGGCAATTCCATCGGCGGCGTGATCGTGGACGCGGGCACGTTCGACTGGACGGCCAGCGGGCGCTATCCTTTCCTCACC CAGCCCCGGCCCGAGTATCAGGGCATCGTGCTGCACGAGACCTTCGGTAATTTCGCCTTCGCCATCGCCGCCCGCGTCCT GGGCCTGCGCGATCTCGGGCCGGCGCTCTCGCCCTTCAATGCCTTCCTGATCCTCACCGGCATCGAGACGCTGGGACTGC GCGTGCAGCGCCACAGCGACAATGCGCTGGCGGTGGCCAATTTCCTGAGCACCCATCCGGCAGTGGAAGGGGTGAGCTAT GCGGGGCTGCCGGGTGACCGCTACCATGACCTCGCCAAGGCCTATCTGCCGAAGGGCGCGGGTGCGGTCTTCACCTTCCG GCTGAAGGGCGGCTATCAGGCGGGCGTGAACCTCGTCTCCAATGTCGAGCTGTTCTCGCATCTCGCCAATATCGGCGACA CCCGCTCGCTCATCATCCACCCCGCTTCCACCACCCACCGCCAGCTCTCGGACGAGCAGAAGACGCTGGCCGGTGCCGGC CCCGAGGTGGTGCGTCTGTCGGTCGGCATCGAGGACGTGGCGGACATCATTGCCGATCTCGATCAGGCGCTTGCGAAGGC CTGA
Upstream 100 bases:
>100_bases CTGCATGATCCATAATTGCACGATCAAACCATGTTCGTCGTGCACATAAGCGCATCCGCCGGGCGGCTTCCGGCGCGGTG CCATACGGAGAGGCAAGCCC
Downstream 100 bases:
>100_bases GGCGGCTCGCGCCCGCGCTGGCCGGATGGCCGGCGCGGGTATCCATCAGTTGCGCGCGCCGTGGACCTCGCGGGCGAGCG CGAGCCAGGCGCGGGCGGCG
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSERTPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYTRIGNPTVAVLEERVAALEGGTA ALAVASGHAAQHLVFHTLLTSGDEFVASRKLYGGSINQFNHAFKSYGWNVAWADPDNVSSFERAITPKTKAIFIESLANP GGIVTDIKAISAVAKKAGIPLIVDNTLATPYLWRPIEHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWTASGRYPFLT QPRPEYQGIVLHETFGNFAFAIAARVLGLRDLGPALSPFNAFLILTGIETLGLRVQRHSDNALAVANFLSTHPAVEGVSY AGLPGDRYHDLAKAYLPKGAGAVFTFRLKGGYQAGVNLVSNVELFSHLANIGDTRSLIIHPASTTHRQLSDEQKTLAGAG PEVVRLSVGIEDVADIIADLDQALAKA
Sequences:
>Translated_427_residues MSERTPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYTRIGNPTVAVLEERVAALEGGTA ALAVASGHAAQHLVFHTLLTSGDEFVASRKLYGGSINQFNHAFKSYGWNVAWADPDNVSSFERAITPKTKAIFIESLANP GGIVTDIKAISAVAKKAGIPLIVDNTLATPYLWRPIEHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWTASGRYPFLT QPRPEYQGIVLHETFGNFAFAIAARVLGLRDLGPALSPFNAFLILTGIETLGLRVQRHSDNALAVANFLSTHPAVEGVSY AGLPGDRYHDLAKAYLPKGAGAVFTFRLKGGYQAGVNLVSNVELFSHLANIGDTRSLIIHPASTTHRQLSDEQKTLAGAG PEVVRLSVGIEDVADIIADLDQALAKA >Mature_426_residues SERTPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYTRIGNPTVAVLEERVAALEGGTAA LAVASGHAAQHLVFHTLLTSGDEFVASRKLYGGSINQFNHAFKSYGWNVAWADPDNVSSFERAITPKTKAIFIESLANPG GIVTDIKAISAVAKKAGIPLIVDNTLATPYLWRPIEHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWTASGRYPFLTQ PRPEYQGIVLHETFGNFAFAIAARVLGLRDLGPALSPFNAFLILTGIETLGLRVQRHSDNALAVANFLSTHPAVEGVSYA GLPGDRYHDLAKAYLPKGAGAVFTFRLKGGYQAGVNLVSNVELFSHLANIGDTRSLIIHPASTTHRQLSDEQKTLAGAGP EVVRLSVGIEDVADIIADLDQALAKA
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=423, Percent_Identity=34.7517730496454, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI299473759, Length=423, Percent_Identity=31.4420803782506, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI25453487, Length=422, Percent_Identity=30.8056872037915, Blast_Score=153, Evalue=3e-37, Organism=Escherichia coli, GI1790375, Length=424, Percent_Identity=30.6603773584906, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1789383, Length=436, Percent_Identity=26.1467889908257, Blast_Score=139, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71980708, Length=418, Percent_Identity=34.2105263157895, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17538055, Length=427, Percent_Identity=33.9578454332553, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17560056, Length=426, Percent_Identity=34.7417840375587, Blast_Score=195, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6323333, Length=432, Percent_Identity=46.2962962962963, Blast_Score=340, Evalue=2e-94, Organism=Saccharomyces cerevisiae, GI6319307, Length=432, Percent_Identity=31.25, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6321254, Length=446, Percent_Identity=26.457399103139, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321170, Length=365, Percent_Identity=27.3972602739726, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321904, Length=432, Percent_Identity=25, Blast_Score=95, Evalue=3e-20, Organism=Drosophila melanogaster, GI19922554, Length=428, Percent_Identity=32.4766355140187, Blast_Score=194, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 45246; Mature: 45114
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERTPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYTRI CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHC GNPTVAVLEERVAALEGGTAALAVASGHAAQHLVFHTLLTSGDEFVASRKLYGGSINQFN CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH HAFKSYGWNVAWADPDNVSSFERAITPKTKAIFIESLANPGGIVTDIKAISAVAKKAGIP HHHHHCCCEEEECCCCCHHHHHHHCCCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHCCCC LIVDNTLATPYLWRPIEHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWTASGRYPFLT EEEECCCCCCCEECCCCCCCCEEEEEHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCC QPRPEYQGIVLHETFGNFAFAIAARVLGLRDLGPALSPFNAFLILTGIETLGLRVQRHSD CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCEEEEECCC NALAVANFLSTHPAVEGVSYAGLPGDRYHDLAKAYLPKGAGAVFTFRLKGGYQAGVNLVS CHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHCCHHHH NVELFSHLANIGDTRSLIIHPASTTHRQLSDEQKTLAGAGPEVVRLSVGIEDVADIIADL HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH DQALAKA HHHHHCC >Mature Secondary Structure SERTPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYTRI CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHC GNPTVAVLEERVAALEGGTAALAVASGHAAQHLVFHTLLTSGDEFVASRKLYGGSINQFN CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH HAFKSYGWNVAWADPDNVSSFERAITPKTKAIFIESLANPGGIVTDIKAISAVAKKAGIP HHHHHCCCEEEECCCCCHHHHHHHCCCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHCCCC LIVDNTLATPYLWRPIEHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWTASGRYPFLT EEEECCCCCCCEECCCCCCCCEEEEEHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCC QPRPEYQGIVLHETFGNFAFAIAARVLGLRDLGPALSPFNAFLILTGIETLGLRVQRHSD CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCEEEEECCC NALAVANFLSTHPAVEGVSYAGLPGDRYHDLAKAYLPKGAGAVFTFRLKGGYQAGVNLVS CHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHCCHHHH NVELFSHLANIGDTRSLIIHPASTTHRQLSDEQKTLAGAGPEVVRLSVGIEDVADIIADL HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH DQALAKA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]