Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423786
Identifier: 158423786
GI number: 158423786
Start: 2479262
End: 2480500
Strand: Direct
Name: 158423786
Synonym: AZC_2162
Alternate gene names: NA
Gene position: 2479262-2480500 (Clockwise)
Preceding gene: 158423785
Following gene: 158423787
Centisome position: 46.17
GC content: 67.39
Gene sequence:
>1239_bases ATGTCTGCGACCACTCCCTTCGTCGGCGTCCGCGTCTTCTCCGACCTGTCGGACACGATCGCCTCGGTCGATACACGCGA CAGCACCGTCATCGGCCTGACCCTGCCGGCGCCGGAGGCGGACAACGCCCGTTTCCCCCTGGACGAGCCGGTGGCGCTCT CCATCGACGATGTGGAGCAGGTGGCGGCCCTCGGCCCAGGCCTGGCGCGCGACACGGTGGACCAGATCCTCTCCGAGGGC ATCGTCACCGACATCTCCTTTGTGCGCGTGGCGGAAGGGGCGGACGCCGAGGCGACCATGGGCCACATCGTCGGCTCGGC CGGGGCGAAGACCGGCGTCTGGGCGCAGCTGGAGGCCAAGGACCATATCGGCATCGAGCCAGGTCTTCTGATCGCGCCGG GCTATACCGGCACCCGGCCCGGCAATGCCGCCAATCCCATCACCACCGCCATGGATGCGGTGTGCGCCCGCATCATCGAC TGCATGGCCGTGGTGGATACGCCCGCCACCAGCCGCGAGGCGGCGGCGCTTTATGCCGAGGACTTCAAGACCTCGCTCAA CATCATCGCCATGTATCCGGGGGCGAAGGTTTATCTGAGCGGCGCGCAGGTGGTGCGCCCGCTCTCGCCCCATGTGGCCG CCGCCATCGTCCGCCGCGACAAGCAGGTGGGCCATCCCTTCAAGGCGGCCTGGAACCGCCCCCTCATCGGCATCCTCGGC GCCTCCCAGCGCGTGACCTATCGCGACGGCGACACCTCGTCGGATGCCAACTATCTGGTGCAGGCCGGCGTCGGCACGGT GATCGAGAACAAGACGCTGTGGGCGCCGTTCTCCACCGCCACCGATCCCACCATCCGCGCCTATCGCTCCATCAAGCGCA TCCGCACCCGGCGCAGCATCGAGAAGGCGTTCTCGACGACGCTACGGGGCTATCTCTCCGAGGATCTCGGCGGGCATCTC GTCACGCTGCTGGTGAAGACGCTGGAAGAGGCCTGCGAGGAGCGGAAGAGCCTGGGCGCCCTCATCGACTATCAGATCGT GTGGGACAGGAAGCTCAACCCCAACACCTTCCTGCGCGACGGTGGCATCCGCCTGAAGCTGCGCTTCGAGGAGACGCCGG ACCTCACCGACCTCCAGATCTATTCCCAGCCGCAGCCGGAAGCCTTCGACGTGCTGGCGTCCTCCATCGCCGACGCGCTC TCCGCCCTCGGCTCATCCAACGTCTATGTGGCGTCCTGA
Upstream 100 bases:
>100_bases ATGCTGCCCGGCGACACCTGTCGCCCGTGCCCTCCCACTCCTTCCTCCTTACACTCCAGCCCCTGAAGCCGCCCGTCAAC CGCGCTTCAAGAGGGCTTTC
Downstream 100 bases:
>100_bases CCGCGCCTGAAGGAGAGAGTGCATGGACCGCATCATCCGGGGCGCCAACTGGTGGATCGAGGAGACCAACCAGCGCCTGC GCACCCGCTCCGCCAAGCTG
Product: phage tail sheath protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein FI; Phage Tail Sheath Protein; Phage-Related Tail Protein; Phage TAIL SHEATH PROTEIN; Prophage; Bacteriophage P2 Tail Sheath Protein GPFI; Phage Tail Sheath Protein FI-Like Protein; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSATTPFVGVRVFSDLSDTIASVDTRDSTVIGLTLPAPEADNARFPLDEPVALSIDDVEQVAALGPGLARDTVDQILSEG IVTDISFVRVAEGADAEATMGHIVGSAGAKTGVWAQLEAKDHIGIEPGLLIAPGYTGTRPGNAANPITTAMDAVCARIID CMAVVDTPATSREAAALYAEDFKTSLNIIAMYPGAKVYLSGAQVVRPLSPHVAAAIVRRDKQVGHPFKAAWNRPLIGILG ASQRVTYRDGDTSSDANYLVQAGVGTVIENKTLWAPFSTATDPTIRAYRSIKRIRTRRSIEKAFSTTLRGYLSEDLGGHL VTLLVKTLEEACEERKSLGALIDYQIVWDRKLNPNTFLRDGGIRLKLRFEETPDLTDLQIYSQPQPEAFDVLASSIADAL SALGSSNVYVAS
Sequences:
>Translated_412_residues MSATTPFVGVRVFSDLSDTIASVDTRDSTVIGLTLPAPEADNARFPLDEPVALSIDDVEQVAALGPGLARDTVDQILSEG IVTDISFVRVAEGADAEATMGHIVGSAGAKTGVWAQLEAKDHIGIEPGLLIAPGYTGTRPGNAANPITTAMDAVCARIID CMAVVDTPATSREAAALYAEDFKTSLNIIAMYPGAKVYLSGAQVVRPLSPHVAAAIVRRDKQVGHPFKAAWNRPLIGILG ASQRVTYRDGDTSSDANYLVQAGVGTVIENKTLWAPFSTATDPTIRAYRSIKRIRTRRSIEKAFSTTLRGYLSEDLGGHL VTLLVKTLEEACEERKSLGALIDYQIVWDRKLNPNTFLRDGGIRLKLRFEETPDLTDLQIYSQPQPEAFDVLASSIADAL SALGSSNVYVAS >Mature_411_residues SATTPFVGVRVFSDLSDTIASVDTRDSTVIGLTLPAPEADNARFPLDEPVALSIDDVEQVAALGPGLARDTVDQILSEGI VTDISFVRVAEGADAEATMGHIVGSAGAKTGVWAQLEAKDHIGIEPGLLIAPGYTGTRPGNAANPITTAMDAVCARIIDC MAVVDTPATSREAAALYAEDFKTSLNIIAMYPGAKVYLSGAQVVRPLSPHVAAAIVRRDKQVGHPFKAAWNRPLIGILGA SQRVTYRDGDTSSDANYLVQAGVGTVIENKTLWAPFSTATDPTIRAYRSIKRIRTRRSIEKAFSTTLRGYLSEDLGGHLV TLLVKTLEEACEERKSLGALIDYQIVWDRKLNPNTFLRDGGIRLKLRFEETPDLTDLQIYSQPQPEAFDVLASSIADALS ALGSSNVYVAS
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44072; Mature: 43941
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTPFVGVRVFSDLSDTIASVDTRDSTVIGLTLPAPEADNARFPLDEPVALSIDDVEQ CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHH VAALGPGLARDTVDQILSEGIVTDISFVRVAEGADAEATMGHIVGSAGAKTGVWAQLEAK HHHHCCCHHHHHHHHHHHCCCHHHHHEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECC DHIGIEPGLLIAPGYTGTRPGNAANPITTAMDAVCARIIDCMAVVDTPATSREAAALYAE CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH DFKTSLNIIAMYPGAKVYLSGAQVVRPLSPHVAAAIVRRDKQVGHPFKAAWNRPLIGILG HHHCCCEEEEECCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEC ASQRVTYRDGDTSSDANYLVQAGVGTVIENKTLWAPFSTATDPTIRAYRSIKRIRTRRSI CCCEEEECCCCCCCCCCEEEECCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH EKAFSTTLRGYLSEDLGGHLVTLLVKTLEEACEERKSLGALIDYQIVWDRKLNPNTFLRD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEC GGIRLKLRFEETPDLTDLQIYSQPQPEAFDVLASSIADALSALGSSNVYVAS CCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure SATTPFVGVRVFSDLSDTIASVDTRDSTVIGLTLPAPEADNARFPLDEPVALSIDDVEQ CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHH VAALGPGLARDTVDQILSEGIVTDISFVRVAEGADAEATMGHIVGSAGAKTGVWAQLEAK HHHHCCCHHHHHHHHHHHCCCHHHHHEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECC DHIGIEPGLLIAPGYTGTRPGNAANPITTAMDAVCARIIDCMAVVDTPATSREAAALYAE CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH DFKTSLNIIAMYPGAKVYLSGAQVVRPLSPHVAAAIVRRDKQVGHPFKAAWNRPLIGILG HHHCCCEEEEECCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEC ASQRVTYRDGDTSSDANYLVQAGVGTVIENKTLWAPFSTATDPTIRAYRSIKRIRTRRSI CCCEEEECCCCCCCCCCEEEECCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH EKAFSTTLRGYLSEDLGGHLVTLLVKTLEEACEERKSLGALIDYQIVWDRKLNPNTFLRD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEC GGIRLKLRFEETPDLTDLQIYSQPQPEAFDVLASSIADALSALGSSNVYVAS CCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA