Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423784
Identifier: 158423784
GI number: 158423784
Start: 2475018
End: 2476859
Strand: Direct
Name: 158423784
Synonym: AZC_2160
Alternate gene names: NA
Gene position: 2475018-2476859 (Clockwise)
Preceding gene: 158423783
Following gene: 158423785
Centisome position: 46.09
GC content: 71.23
Gene sequence:
>1842_bases ATGCCGTCCTCTCTGCCCAGCCCCGATAGCGATTATGCCGCCCCGCACGACATGCGCCTCAACAAGGCGGCATGGGATGC GGCCCTCGTCAGCGTCGGCCTGCGGCTCCGCGCGCTGGAGGCCGTGCGGGCGAGCTTCGAGGCGCTGATTGATCTGGGCA CCGGCCAGGCGCTGCAGGTGATCCAGGCTAATGTCGCCCCCGAGCTTCAGGCCATGCGCACCGCGCTCGCCGCGCTCCAG GCGGCCATGGCCGAGGCCGAGGATCAGGTCCACGCCATCATCACCGGCTCCATCCCGGCCTCGGCGATCGTCGCGCCCAC CTTGCCGCCGGGCACGGCGGACGGCCAGCTCGCCACCACCGCCCATGTGGCGCAGACGGTGGCAGCCTTCACCGGCGCCG GCAACCGCCTGCCCAATGCGGCAGGGGCTGCCGGCATGATGGGCGTCAGTGTTGCCGGTCCCTCCAGCATGCTCTCCGGC GCGGCGGGGGCCGCCGGCCAGCACACCGTGTGGCTGCCGGCGGGTGTGCAGGGCTGGTTCCTGATCCAGCAGGACGAGGC CGACGCCTACTGCTGGTTCGACTTCCACGATGGCAGCGGCAATGCCTTCCCCGTGCAGGGCGGCGAGGCCTATCAGTTCT CGGTTTATACCGGGAACCATCGGGCCAGGGTGGTCTATGCCGAGCTGCTCTGGTTCGATGCCGCCGGCACGCTGCTCGGC ACCTCCAACTGCCTCGGCGGGACGAGCGTGGCGGATGCACCCGTGCTCGCCTTCTCCGGCAGCAATGGCGGCACCTCTCC CGAGGCCGTCTCCGGTCCGCGCTTCTCCGATGCCCGCCGCCTGTGGCTCATCGCCCGCGCCCCGGCCGCCGCCGTGCGGG CCATGCCGCGCCTGGTGAAGGGGCCGACCAAGGCGGGCGGCGGCACCTCGGCGATGTTCGCCTACCGGCCGTACTTCGGC GAGGCGGCTCCCGGCCAGCTCCTGCCGTCCGCCTGGAGCTACGGACCGGCCACCACCGAGATCCGCGCCGCGGTGGAGGC GCTGGCCTCGACCGCCTCCGTGGCCGCCGCCATCCGGGCCGCGGTCGATGGCCTCGTGGATGCCGCGCCCGGTGCGCTCG ACACCCTCAAGGAGCTCTCCGCCGCCCTCGGCAATGATCCGAACTTCTCTGCCTCCGTCTCGGCAGCGCTGGGTGCGCGC CTCCGCATCGACACGGCGCAGGGTCTGTCGGAGGCCGCCAGGGCTATCGGGCGGGACAATCTGGGGGCGCAGGCCGCGCT CGGTTATGTGCCGGCGAACAGGACCGGCGACACCTTCACCGGCAACATCGCCATCGGCGCGGCCATCCATCAGACGGACG GCAACATCTACATGCCCTGGGCCGGCGGGCGCTGGCTGCACGAGATGGTGCCTTACTTCGTCGAGACCTGGATGTCCGAC AGCCAGGGCGCCTTGCGGGCCATCTACTCGCCCGGCAGCGCCACGATCCTGCGCGGTGCGGGTGGTGCGGACCGCCCGGC GCTCTCCGTGCAGCGCGGCGGCGATGGGGCCGCCCTGTTCCAGGTGGAAGGCAATGGCGACCTTTATGCGGGCTTCTATG GCGCCACCCTCTCGGCCGTCTTCAACCGGGCGAAGAACATCCGCCTGGCCTCCGTCCGCTGGTGGGACATCCGCGTCAAT GCCGGCCATACCGAGCACGTCGCCTCGGCCGGCGAGGTGATGGTGGGCCTGACCTCCTATTACGGCCCCGACGCCAACGG CCGGACCATCGCCGGCTTCTTCTATGCGTCCCTCCAGCAGCAGGACGCCTACGGCAACTGGTACGCCGTCAGCACCGTGT GA
Upstream 100 bases:
>100_bases GCCCGGCCGGTCACGGTCGGCGCCGCGCGCCTGCTGCCCCGTGGCGAGCTGACGCTCACCGGGGCGCTCCTCGTCCAGCT CATCACGGAGAACGGGGCCG
Downstream 100 bases:
>100_bases GGAACATCCCATGGACATCATCGAACACGGCCGCTGGGCCGCTTATGTACCGCAGACCATCCATCCGCTGGCCCCGCCCA ATGCCCTGTACTGGCGGCAG
Product: prophage MuMc02 head decoration protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MPSSLPSPDSDYAAPHDMRLNKAAWDAALVSVGLRLRALEAVRASFEALIDLGTGQALQVIQANVAPELQAMRTALAALQ AAMAEAEDQVHAIITGSIPASAIVAPTLPPGTADGQLATTAHVAQTVAAFTGAGNRLPNAAGAAGMMGVSVAGPSSMLSG AAGAAGQHTVWLPAGVQGWFLIQQDEADAYCWFDFHDGSGNAFPVQGGEAYQFSVYTGNHRARVVYAELLWFDAAGTLLG TSNCLGGTSVADAPVLAFSGSNGGTSPEAVSGPRFSDARRLWLIARAPAAAVRAMPRLVKGPTKAGGGTSAMFAYRPYFG EAAPGQLLPSAWSYGPATTEIRAAVEALASTASVAAAIRAAVDGLVDAAPGALDTLKELSAALGNDPNFSASVSAALGAR LRIDTAQGLSEAARAIGRDNLGAQAALGYVPANRTGDTFTGNIAIGAAIHQTDGNIYMPWAGGRWLHEMVPYFVETWMSD SQGALRAIYSPGSATILRGAGGADRPALSVQRGGDGAALFQVEGNGDLYAGFYGATLSAVFNRAKNIRLASVRWWDIRVN AGHTEHVASAGEVMVGLTSYYGPDANGRTIAGFFYASLQQQDAYGNWYAVSTV
Sequences:
>Translated_613_residues MPSSLPSPDSDYAAPHDMRLNKAAWDAALVSVGLRLRALEAVRASFEALIDLGTGQALQVIQANVAPELQAMRTALAALQ AAMAEAEDQVHAIITGSIPASAIVAPTLPPGTADGQLATTAHVAQTVAAFTGAGNRLPNAAGAAGMMGVSVAGPSSMLSG AAGAAGQHTVWLPAGVQGWFLIQQDEADAYCWFDFHDGSGNAFPVQGGEAYQFSVYTGNHRARVVYAELLWFDAAGTLLG TSNCLGGTSVADAPVLAFSGSNGGTSPEAVSGPRFSDARRLWLIARAPAAAVRAMPRLVKGPTKAGGGTSAMFAYRPYFG EAAPGQLLPSAWSYGPATTEIRAAVEALASTASVAAAIRAAVDGLVDAAPGALDTLKELSAALGNDPNFSASVSAALGAR LRIDTAQGLSEAARAIGRDNLGAQAALGYVPANRTGDTFTGNIAIGAAIHQTDGNIYMPWAGGRWLHEMVPYFVETWMSD SQGALRAIYSPGSATILRGAGGADRPALSVQRGGDGAALFQVEGNGDLYAGFYGATLSAVFNRAKNIRLASVRWWDIRVN AGHTEHVASAGEVMVGLTSYYGPDANGRTIAGFFYASLQQQDAYGNWYAVSTV >Mature_612_residues PSSLPSPDSDYAAPHDMRLNKAAWDAALVSVGLRLRALEAVRASFEALIDLGTGQALQVIQANVAPELQAMRTALAALQA AMAEAEDQVHAIITGSIPASAIVAPTLPPGTADGQLATTAHVAQTVAAFTGAGNRLPNAAGAAGMMGVSVAGPSSMLSGA AGAAGQHTVWLPAGVQGWFLIQQDEADAYCWFDFHDGSGNAFPVQGGEAYQFSVYTGNHRARVVYAELLWFDAAGTLLGT SNCLGGTSVADAPVLAFSGSNGGTSPEAVSGPRFSDARRLWLIARAPAAAVRAMPRLVKGPTKAGGGTSAMFAYRPYFGE AAPGQLLPSAWSYGPATTEIRAAVEALASTASVAAAIRAAVDGLVDAAPGALDTLKELSAALGNDPNFSASVSAALGARL RIDTAQGLSEAARAIGRDNLGAQAALGYVPANRTGDTFTGNIAIGAAIHQTDGNIYMPWAGGRWLHEMVPYFVETWMSDS QGALRAIYSPGSATILRGAGGADRPALSVQRGGDGAALFQVEGNGDLYAGFYGATLSAVFNRAKNIRLASVRWWDIRVNA GHTEHVASAGEVMVGLTSYYGPDANGRTIAGFFYASLQQQDAYGNWYAVSTV
Specific function: Unknown
COG id: COG5301
COG function: function code R; Phage-related tail fibre protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63080; Mature: 62949
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSLPSPDSDYAAPHDMRLNKAAWDAALVSVGLRLRALEAVRASFEALIDLGTGQALQV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH IQANVAPELQAMRTALAALQAAMAEAEDQVHAIITGSIPASAIVAPTLPPGTADGQLATT HHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCHHH AHVAQTVAAFTGAGNRLPNAAGAAGMMGVSVAGPSSMLSGAAGAAGQHTVWLPAGVQGWF HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCEEEEEECCCCEEE LIQQDEADAYCWFDFHDGSGNAFPVQGGEAYQFSVYTGNHRARVVYAELLWFDAAGTLLG EEEECCCCEEEEEEEECCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCEEE TSNCLGGTSVADAPVLAFSGSNGGTSPEAVSGPRFSDARRLWLIARAPAAAVRAMPRLVK CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHC GPTKAGGGTSAMFAYRPYFGEAAPGQLLPSAWSYGPATTEIRAAVEALASTASVAAAIRA CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVDGLVDAAPGALDTLKELSAALGNDPNFSASVSAALGARLRIDTAQGLSEAARAIGRDN HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHCCCC LGAQAALGYVPANRTGDTFTGNIAIGAAIHQTDGNIYMPWAGGRWLHEMVPYFVETWMSD CCCHHEEEECCCCCCCCEEECCEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCC SQGALRAIYSPGSATILRGAGGADRPALSVQRGGDGAALFQVEGNGDLYAGFYGATLSAV CCCCEEEEECCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEHHHHHHHHH FNRAKNIRLASVRWWDIRVNAGHTEHVASAGEVMVGLTSYYGPDANGRTIAGFFYASLQQ HHHHCCCEEEEEEEEEEEECCCCHHHHHCCCCEEEEEHHHCCCCCCCCEEEEEEEEHHHC QDAYGNWYAVSTV CCCCCCEEEEEEC >Mature Secondary Structure PSSLPSPDSDYAAPHDMRLNKAAWDAALVSVGLRLRALEAVRASFEALIDLGTGQALQV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH IQANVAPELQAMRTALAALQAAMAEAEDQVHAIITGSIPASAIVAPTLPPGTADGQLATT HHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCHHH AHVAQTVAAFTGAGNRLPNAAGAAGMMGVSVAGPSSMLSGAAGAAGQHTVWLPAGVQGWF HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCEEEEEECCCCEEE LIQQDEADAYCWFDFHDGSGNAFPVQGGEAYQFSVYTGNHRARVVYAELLWFDAAGTLLG EEEECCCCEEEEEEEECCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCEEE TSNCLGGTSVADAPVLAFSGSNGGTSPEAVSGPRFSDARRLWLIARAPAAAVRAMPRLVK CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHC GPTKAGGGTSAMFAYRPYFGEAAPGQLLPSAWSYGPATTEIRAAVEALASTASVAAAIRA CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVDGLVDAAPGALDTLKELSAALGNDPNFSASVSAALGARLRIDTAQGLSEAARAIGRDN HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHCCCC LGAQAALGYVPANRTGDTFTGNIAIGAAIHQTDGNIYMPWAGGRWLHEMVPYFVETWMSD CCCHHEEEECCCCCCCCEEECCEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCC SQGALRAIYSPGSATILRGAGGADRPALSVQRGGDGAALFQVEGNGDLYAGFYGATLSAV CCCCEEEEECCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEHHHHHHHHH FNRAKNIRLASVRWWDIRVNAGHTEHVASAGEVMVGLTSYYGPDANGRTIAGFFYASLQQ HHHHCCCEEEEEEEEEEEECCCCHHHHHCCCCEEEEEHHHCCCCCCCCEEEEEEEEHHHC QDAYGNWYAVSTV CCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA