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The map label for this gene is ybcS [C]

Identifier: 158423761

GI number: 158423761

Start: 2455359

End: 2456120

Strand: Direct

Name: ybcS [C]

Synonym: AZC_2137

Alternate gene names: 158423761

Gene position: 2455359-2456120 (Clockwise)

Preceding gene: 158423759

Following gene: 158423762

Centisome position: 45.73

GC content: 71.26

Gene sequence:

>762_bases
GTGTCAGCCCAGACCATTTCGCGCGACGGGGTGGACCTCGTCAAAGCCTTTGAAAGCTGCCTGAAACCGGCCCCCGGCCG
CAAGGGCTTCTTCACCACCTATCTCTGCCCGGCGGGCGTCCTCACCATCGGCTGGGGCCACACCAACGATCACGGGCGGG
CGTTCAGGGCGGGCGCCGTCTGGAGCCAGGCCGAGTGCGACACCGCGCTCGCCCAGGACCTCGCCACCCTCGAGGCCAGC
GTCTCCACCATCCTGAAGGACGTGCCGCTCGCCCAGCACGAGTATGATGCGCTGGTCTCGATGTCCTACAACATCGGCCC
GCTCACCCGCTCGTCCATCCCCGCCAAATTGAAGGCCGGCCGGAAGGCCGAGGTCCGCGCCGTCATGGCCCGCTGGAACA
AGGGCGGCGGCCGGGTGCTGCCGGGCCTCACCCGTCGCCGGGAGGCGGAGGCCGATCTCTTCGAGGGCAAGATCGACGAG
GCCCTGCGCACGGCCGGCGTCATGCGCGCCGCCGCGCTCCCCATGCCGCAGAAGGTCGATGTGCCGAAGCCCCCGGTCTC
GGTGGTGGCCGCCGGCACGAAGCGCGAGACCGCCGGGATGGCGGCCGGCGGCACGCTCGCCGCGGGCTCCGGCTCGGGCG
AGGCCCATCCTTTCTCTTCCGCTCTCACCGCCGCGGGCCTCGCCCTCGGCCTCGCCCTGGTCGTCGCGGCCGGCTTCCTG
CTGGTCCGCAAGTACAAGCTCATCGCAGAGGATTGGCGCTGA

Upstream 100 bases:

>100_bases
CGACACCCGTCGCCCGTCCAACCTCGTCCCATCCTCCCCATGATCGCGACAGCGCGCTTCGGGGCCTTGCCGGAGCGCGG
TCCTTCATGGGGAGTGGCGC

Downstream 100 bases:

>100_bases
TGGATTGGTCGTCTCTCGCTTCCGAGGTTATCAAGCTCGGCGCCCCGGTGCTGGGCACCGCGCTCGGCGGCCCGCTGGGC
GGTTCGGTCGGCAAGGTGCT

Product: phage-related lysozyme

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Phage-Related Lysozyme; Phage Related Lysozyme; Phage Lysozyme; Glycoside Hydrolase Family; Glycoside Hydrolase; Glycoside Hydrolase Family Protein; Gifsy-2 Prophage Lysozyme; Endolysin; Phage Lysozome; Mur1 Protein

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSAQTISRDGVDLVKAFESCLKPAPGRKGFFTTYLCPAGVLTIGWGHTNDHGRAFRAGAVWSQAECDTALAQDLATLEAS
VSTILKDVPLAQHEYDALVSMSYNIGPLTRSSIPAKLKAGRKAEVRAVMARWNKGGGRVLPGLTRRREAEADLFEGKIDE
ALRTAGVMRAAALPMPQKVDVPKPPVSVVAAGTKRETAGMAAGGTLAAGSGSGEAHPFSSALTAAGLALGLALVVAAGFL
LVRKYKLIAEDWR

Sequences:

>Translated_253_residues
MSAQTISRDGVDLVKAFESCLKPAPGRKGFFTTYLCPAGVLTIGWGHTNDHGRAFRAGAVWSQAECDTALAQDLATLEAS
VSTILKDVPLAQHEYDALVSMSYNIGPLTRSSIPAKLKAGRKAEVRAVMARWNKGGGRVLPGLTRRREAEADLFEGKIDE
ALRTAGVMRAAALPMPQKVDVPKPPVSVVAAGTKRETAGMAAGGTLAAGSGSGEAHPFSSALTAAGLALGLALVVAAGFL
LVRKYKLIAEDWR
>Mature_252_residues
SAQTISRDGVDLVKAFESCLKPAPGRKGFFTTYLCPAGVLTIGWGHTNDHGRAFRAGAVWSQAECDTALAQDLATLEASV
STILKDVPLAQHEYDALVSMSYNIGPLTRSSIPAKLKAGRKAEVRAVMARWNKGGGRVLPGLTRRREAEADLFEGKIDEA
LRTAGVMRAAALPMPQKVDVPKPPVSVVAAGTKRETAGMAAGGTLAAGSGSGEAHPFSSALTAAGLALGLALVVAAGFLL
VRKYKLIAEDWR

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 26511; Mature: 26380

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQTISRDGVDLVKAFESCLKPAPGRKGFFTTYLCPAGVLTIGWGHTNDHGRAFRAGAV
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCEEECCCC
WSQAECDTALAQDLATLEASVSTILKDVPLAQHEYDALVSMSYNIGPLTRSSIPAKLKAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCCHHHHCC
RKAEVRAVMARWNKGGGRVLPGLTRRREAEADLFEGKIDEALRTAGVMRAAALPMPQKVD
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VPKPPVSVVAAGTKRETAGMAAGGTLAAGSGSGEAHPFSSALTAAGLALGLALVVAAGFL
CCCCCHHEEECCCCHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVRKYKLIAEDWR
HHHHHHHHHHCCC
>Mature Secondary Structure 
SAQTISRDGVDLVKAFESCLKPAPGRKGFFTTYLCPAGVLTIGWGHTNDHGRAFRAGAV
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCEEECCCC
WSQAECDTALAQDLATLEASVSTILKDVPLAQHEYDALVSMSYNIGPLTRSSIPAKLKAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCCHHHHCC
RKAEVRAVMARWNKGGGRVLPGLTRRREAEADLFEGKIDEALRTAGVMRAAALPMPQKVD
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VPKPPVSVVAAGTKRETAGMAAGGTLAAGSGSGEAHPFSSALTAAGLALGLALVVAAGFL
CCCCCHHEEECCCCHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVRKYKLIAEDWR
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA