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The map label for this gene is ycaC [H]

Identifier: 158423744

GI number: 158423744

Start: 2438635

End: 2439327

Strand: Direct

Name: ycaC [H]

Synonym: AZC_2120

Alternate gene names: 158423744

Gene position: 2438635-2439327 (Clockwise)

Preceding gene: 158423742

Following gene: 158423745

Centisome position: 45.41

GC content: 67.24

Gene sequence:

>693_bases
ATGCGGCACGGTTCAAGACCGGAAGGGATGTCGGAGGTCATGGTTTCCCGGAAAGGGAGACGCTTCATGACCCCATCCCC
CCTGATCGAACCCGCGCAGTGCGCGCTCATCCTCGTCGACCAGCAGGCCGGTCTGGCCTTCGCCTCCGGATCTGCGGATG
CGCAGATGCTGCGCAACAACGGCCTTGCCGCGGCAAAGACCGCCGTCGCCTTCGGCCTGCCGATCGTCGTCTCCACCTCG
GCAAGCAAGGTCTATAGCGGGCCGCTCATGCCCGCCTTTCGCGCCGTGCTGCCCGATGTGGCACCCATCGAGCGTCGAAA
CATGAACTTGTGGGAAGATGAGGCCGCCCATGCTGCGGTCGTCGCCACCGGCCGCAAGACGCTCATCTTCGCCGGGCTTC
TGGCGGAGGCGTGCATCAGCTTTCCCGTGCTCTCCGCTCTCGCCGACGGCTACCGCGTGTTCGTGGTGGCCGACGCCTGC
GGCGGACTGACGGCGACGAGCCACGATCTGGCGCTCCGGCGTCTTGAGGCGGCGGGCGCGACCCTCACCTCCTGGCTTCA
GATGCTGCTCGAACTCCAGCGCGACTGGACCCGCCACGACACCTATGAAGCCGCGCGCGCCATCGTCGTGGAGCATGGCG
GAGGCTACGGCACGGGCCTCGCCTATGCGCGGGACATGATCAAGCCGGCCTGA

Upstream 100 bases:

>100_bases
CTGTCTGCGGGGCCCGCAACTGGCCCTATGGCCCGTTGGGCTGATCGGCGAAGTCGCCCGCTCGCCGCTTCGGTCTGTTG
AACGAAACGACCCGCGCCGG

Downstream 100 bases:

>100_bases
TCCTCGCGTGCGGGTCCGGCGCCATCGCGCGGCGCCGGACGGCGCCCCCGGCCTGCCCCCCTATCCATCATCCCGATCCT
GTGGAGAGCCTCCTATGACT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRHGSRPEGMSEVMVSRKGRRFMTPSPLIEPAQCALILVDQQAGLAFASGSADAQMLRNNGLAAAKTAVAFGLPIVVSTS
ASKVYSGPLMPAFRAVLPDVAPIERRNMNLWEDEAAHAAVVATGRKTLIFAGLLAEACISFPVLSALADGYRVFVVADAC
GGLTATSHDLALRRLEAAGATLTSWLQMLLELQRDWTRHDTYEAARAIVVEHGGGYGTGLAYARDMIKPA

Sequences:

>Translated_230_residues
MRHGSRPEGMSEVMVSRKGRRFMTPSPLIEPAQCALILVDQQAGLAFASGSADAQMLRNNGLAAAKTAVAFGLPIVVSTS
ASKVYSGPLMPAFRAVLPDVAPIERRNMNLWEDEAAHAAVVATGRKTLIFAGLLAEACISFPVLSALADGYRVFVVADAC
GGLTATSHDLALRRLEAAGATLTSWLQMLLELQRDWTRHDTYEAARAIVVEHGGGYGTGLAYARDMIKPA
>Mature_230_residues
MRHGSRPEGMSEVMVSRKGRRFMTPSPLIEPAQCALILVDQQAGLAFASGSADAQMLRNNGLAAAKTAVAFGLPIVVSTS
ASKVYSGPLMPAFRAVLPDVAPIERRNMNLWEDEAAHAAVVATGRKTLIFAGLLAEACISFPVLSALADGYRVFVVADAC
GGLTATSHDLALRRLEAAGATLTSWLQMLLELQRDWTRHDTYEAARAIVVEHGGGYGTGLAYARDMIKPA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=177, Percent_Identity=40.6779661016949, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24468; Mature: 24468

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHGSRPEGMSEVMVSRKGRRFMTPSPLIEPAQCALILVDQQAGLAFASGSADAQMLRNN
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHCC
GLAAAKTAVAFGLPIVVSTSASKVYSGPLMPAFRAVLPDVAPIERRNMNLWEDEAAHAAV
CCHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHCCCCCCHHHCCCCCCHHHCCCEEE
VATGRKTLIFAGLLAEACISFPVLSALADGYRVFVVADACGGLTATSHDLALRRLEAAGA
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCC
TLTSWLQMLLELQRDWTRHDTYEAARAIVVEHGGGYGTGLAYARDMIKPA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRHGSRPEGMSEVMVSRKGRRFMTPSPLIEPAQCALILVDQQAGLAFASGSADAQMLRNN
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHCC
GLAAAKTAVAFGLPIVVSTSASKVYSGPLMPAFRAVLPDVAPIERRNMNLWEDEAAHAAV
CCHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHCCCCCCHHHCCCCCCHHHCCCEEE
VATGRKTLIFAGLLAEACISFPVLSALADGYRVFVVADACGGLTATSHDLALRRLEAAGA
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCC
TLTSWLQMLLELQRDWTRHDTYEAARAIVVEHGGGYGTGLAYARDMIKPA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]