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The map label for this gene is cyoD [H]

Identifier: 158423725

GI number: 158423725

Start: 2418390

End: 2418788

Strand: Direct

Name: cyoD [H]

Synonym: AZC_2101

Alternate gene names: 158423725

Gene position: 2418390-2418788 (Clockwise)

Preceding gene: 158423724

Following gene: 158423726

Centisome position: 45.04

GC content: 61.4

Gene sequence:

>399_bases
ATGAGCGCTAACGGCCACGCACACTCGGGCGCAGCCCACGGCCATGACGCGCACGGCGCCCATGGCGAAGATCACGGCCA
CGGTTCGTTCAAGAGCTACATGACCGGCTTCATCCTGTCGGTCATCCTCACCGCCATCCCGTTCTGGCTGGTGATGACGA
ATGCGCTCGGCAACAACCAGCTGACGGCCATCGTCATCATGGCCTTCGCCGTGGTGCAGATCGTCGTGCACATGATCTAC
TTCCTGCACATGACCGGTAAGGTCGAGGGCGGCTGGAGCATGCTGGCGCTCATCTTCACCGTCATCGTGGTGGTGATCGC
GCTGAGCGGCTCTCTGTGGGTCATGTACCATCTGAACGCCAACATGATGCCGTCCCACGACATGCGGATCGCTCCGTGA

Upstream 100 bases:

>100_bases
CCAACCGTCGCCGCCTGATGTGCCTGTCCATGTTCTGGCACTTCCTGGACGTGATCTGGATCGGCGTCTTCACCTTCGTC
TATCTCATGGGGATGCTGCG

Downstream 100 bases:

>100_bases
GTGAGGACCGGCCGGAGGCTGCGGGCTCTGCCCGCGGCACCGACAATCAGACGGACGGGGCCAAAAGCCCCGTCCGTGCT
GTTTGGGCCATCGGTTTCCT

Product: cytochrome o ubiquinol oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSANGHAHSGAAHGHDAHGAHGEDHGHGSFKSYMTGFILSVILTAIPFWLVMTNALGNNQLTAIVIMAFAVVQIVVHMIY
FLHMTGKVEGGWSMLALIFTVIVVVIALSGSLWVMYHLNANMMPSHDMRIAP

Sequences:

>Translated_132_residues
MSANGHAHSGAAHGHDAHGAHGEDHGHGSFKSYMTGFILSVILTAIPFWLVMTNALGNNQLTAIVIMAFAVVQIVVHMIY
FLHMTGKVEGGWSMLALIFTVIVVVIALSGSLWVMYHLNANMMPSHDMRIAP
>Mature_131_residues
SANGHAHSGAAHGHDAHGAHGEDHGHGSFKSYMTGFILSVILTAIPFWLVMTNALGNNQLTAIVIMAFAVVQIVVHMIYF
LHMTGKVEGGWSMLALIFTVIVVVIALSGSLWVMYHLNANMMPSHDMRIAP

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=107, Percent_Identity=52.3364485981308, Blast_Score=111, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 14263; Mature: 14132

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANGHAHSGAAHGHDAHGAHGEDHGHGSFKSYMTGFILSVILTAIPFWLVMTNALGNNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LTAIVIMAFAVVQIVVHMIYFLHMTGKVEGGWSMLALIFTVIVVVIALSGSLWVMYHLNA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC
NMMPSHDMRIAP
CCCCCCCCEECC
>Mature Secondary Structure 
SANGHAHSGAAHGHDAHGAHGEDHGHGSFKSYMTGFILSVILTAIPFWLVMTNALGNNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LTAIVIMAFAVVQIVVHMIYFLHMTGKVEGGWSMLALIFTVIVVVIALSGSLWVMYHLNA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC
NMMPSHDMRIAP
CCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]