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The map label for this gene is phnV [H]

Identifier: 158423716

GI number: 158423716

Start: 2405745

End: 2406512

Strand: Direct

Name: phnV [H]

Synonym: AZC_2092

Alternate gene names: 158423716

Gene position: 2405745-2406512 (Clockwise)

Preceding gene: 158423715

Following gene: 158423717

Centisome position: 44.8

GC content: 65.62

Gene sequence:

>768_bases
GTGCTCGCCACCTGTCTCTATCTGCTGTTCCTGTTCGCGCCCATCGCCTTGCTGGTGATGGGATCGCTCGGGGAAAGCTG
GACCAACAGCCTGCTGCCGAGCGGCCTTACCGGCCGCTGGTATGCGGAGCTGGCCGCCGATCCGAGCTTCCAGCGCGCGT
TCCTCACCAGCCTCAAGGTGGTGGCTGCGACCTGCATCCTCGACATGCTGATCGCCGTGCCTCTGGCCTATGCGCTGCAT
TCCACGGCGCGGCGCGGCGTTCAGGCGGCGGCGCGGGTGGTGACGCTGTTGCCCATCGCCACGCCCGAACTGGTGCTTGG
CTTCGGCTTCATCCTCGTCTTCTCCTCCGATGCCTTGCCGTTCATCGGCAGCATCTGGCTGCTCATTGCCGCCCATGTGG
TGGTGACGCTGCCCTATCTCCTCAACATCCTTCTATCGGACATGACTCAGCTCAAGCTCGGCGACCTGGAGCGGGTGGCG
GCCACCCTCGGCGCTCCCTTCATGAGCCGCTTCTTCGATATCGTGCTGCCGCTGGTGCGTCACAGCCTGTTCGCCGGCCT
GATCACGGTCTCGGCCATCTCCATTGGCGAGTTCCAGATTTCCAATCTCATCGCCGGCTTCCTCACACGCACCTATCCGA
TCACGCTGTTGCAGGCCTTCTACGGCGCCACGGGCTTTGCCTGCGCCGCGACCGTCGTCCTGCTGGTGCTCGCGGTGACG
GCCTCCGCGGCCGGTGCGCTGACGGCTCGCGCCGCACGGACGGGTTGA

Upstream 100 bases:

>100_bases
CGTCCGTTCGGTGGTTGATCGAAATCTTCCATATATGTCATAAAAGTATCATCGGATCGGGCGCAGAAGATGCCCGACCA
TATGGGGGAAGACCGGCGCC

Downstream 100 bases:

>100_bases
ACCATGAGCGTGCGTTTCGAGAACGTCTCCTTCCGCTATCCCGGCACGACCACCGGCGTCTTCGACATCGATCTGGAGAT
CGCGACCGGCGAGCTGCTGG

Product: ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLATCLYLLFLFAPIALLVMGSLGESWTNSLLPSGLTGRWYAELAADPSFQRAFLTSLKVVAATCILDMLIAVPLAYALH
STARRGVQAAARVVTLLPIATPELVLGFGFILVFSSDALPFIGSIWLLIAAHVVVTLPYLLNILLSDMTQLKLGDLERVA
ATLGAPFMSRFFDIVLPLVRHSLFAGLITVSAISIGEFQISNLIAGFLTRTYPITLLQAFYGATGFACAATVVLLVLAVT
ASAAGALTARAARTG

Sequences:

>Translated_255_residues
MLATCLYLLFLFAPIALLVMGSLGESWTNSLLPSGLTGRWYAELAADPSFQRAFLTSLKVVAATCILDMLIAVPLAYALH
STARRGVQAAARVVTLLPIATPELVLGFGFILVFSSDALPFIGSIWLLIAAHVVVTLPYLLNILLSDMTQLKLGDLERVA
ATLGAPFMSRFFDIVLPLVRHSLFAGLITVSAISIGEFQISNLIAGFLTRTYPITLLQAFYGATGFACAATVVLLVLAVT
ASAAGALTARAARTG
>Mature_255_residues
MLATCLYLLFLFAPIALLVMGSLGESWTNSLLPSGLTGRWYAELAADPSFQRAFLTSLKVVAATCILDMLIAVPLAYALH
STARRGVQAAARVVTLLPIATPELVLGFGFILVFSSDALPFIGSIWLLIAAHVVVTLPYLLNILLSDMTQLKLGDLERVA
ATLGAPFMSRFFDIVLPLVRHSLFAGLITVSAISIGEFQISNLIAGFLTRTYPITLLQAFYGATGFACAATVVLLVLAVT
ASAAGALTARAARTG

Specific function: Probably part of the phnSTUV complex (TC 3.A.1.11.5) involved in 2-aminoethylphosphonate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017661
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27006; Mature: 27006

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATCLYLLFLFAPIALLVMGSLGESWTNSLLPSGLTGRWYAELAADPSFQRAFLTSLKV
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
VAATCILDMLIAVPLAYALHSTARRGVQAAARVVTLLPIATPELVLGFGFILVFSSDALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
FIGSIWLLIAAHVVVTLPYLLNILLSDMTQLKLGDLERVAATLGAPFMSRFFDIVLPLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HSLFAGLITVSAISIGEFQISNLIAGFLTRTYPITLLQAFYGATGFACAATVVLLVLAVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ASAAGALTARAARTG
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MLATCLYLLFLFAPIALLVMGSLGESWTNSLLPSGLTGRWYAELAADPSFQRAFLTSLKV
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
VAATCILDMLIAVPLAYALHSTARRGVQAAARVVTLLPIATPELVLGFGFILVFSSDALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
FIGSIWLLIAAHVVVTLPYLLNILLSDMTQLKLGDLERVAATLGAPFMSRFFDIVLPLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HSLFAGLITVSAISIGEFQISNLIAGFLTRTYPITLLQAFYGATGFACAATVVLLVLAVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ASAAGALTARAARTG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA