Definition | Azorhizobium caulinodans ORS 571, complete genome. |
---|---|
Accession | NC_009937 |
Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158423508
Identifier: 158423508
GI number: 158423508
Start: 2157968
End: 2159116
Strand: Direct
Name: 158423508
Synonym: AZC_1884
Alternate gene names: NA
Gene position: 2157968-2159116 (Clockwise)
Preceding gene: 158423507
Following gene: 158423509
Centisome position: 40.19
GC content: 65.45
Gene sequence:
>1149_bases ATGAAACTTCAGGCCCTGGCGCTCGGCGCCGCCATCCTTGTCCTACCCCTTACGGGCAGCCTCGCGCAGGAGATCAAGCT CGGCGCTACGCTCTCCACCACCGGGCCAGCGGCCTCGCTCGGCATTCCCATGAAAAACACCCTTCAGATCCTGCCCAAGG AGATCGAGGGTGTTCCCGTCTCGTGGACCATTCTCGACGATGGCACGGACACGACACAGGCGCGGCGCAATGCCGAGAAG CTGGCCTCGGAGAATGTGGACCTCATCATCGGCGGCAACACCACGCCCACCTCGCTCGCGACGGTGGAGATTGCCGGCCG CACCCAGACCCCCGTTCTCGCCATTGCGCCGTCGCCTGGCATCATAGAGCCGGTGGAGGGGGCGAAGACCTGGGTCTTCA AGGTGCCGCTGGGCGAGCGGGAACTGGCCGAGCGCACCCTTGCCAGCATGTCGCAACGTGGCGTGAAGACCATCGGCTTC ATCGGCTTCAACGATGCGCTGGGTGAAGGCTGGCTCAAGGAGTTCGAGCGGTTTGCGCCGAAGTTCGGCATCACCATCTC GGCGGTGGAGAAGTTCGCGCGAACGGACACCTCCGTGGTGGCGCAGGCGCTGAAGGTTCTGGCGGCGCGCCCCGACGCGG TCTTTGTGGGGGCCACCGGCACGCCCGCCGTGCTGCCTACCGCCCAGTTGCGGGAGCGCGGCTACAAGGGGCTCATCTAT CAGGCATCCGGCGTGGTAAATAACGACTTCCTGCGCGTTGGCGGCAAGAATGTGGATGGGGTTCTGATCGCCGCCGGCCC GCTGCTCGTGGCCAGCGCCCTGCCGGACGCCAACCCCAGCAAGGCCACCAGCCTCGATTTCGTGAAGCTGTATGAGGCCA CCTATGGTCCCGGCTCGGCCTCGCTGTTCGCCGGAAATGCCTATGACGCCTGGCTGCTGATCCGCAATGCAATGTCCTCG GCCCTTAAGGTGGCAAAGCCGGGAACGCCGGAATTCCGCGCTGCGCTGCGCTCGGCGCTGGAAAAGACGGACGGTCTTGC GGTCACGAACGGCGTCATCACCTTCGGGCCGAACAATCACGGCATTTTCCCGCCGGGAACGCCGGTGATGCTGACGGTGC GCAACGGCACCTGGGCGCTCGCCAACTGA
Upstream 100 bases:
>100_bases ACCGGGTCGAGGTGGAGATTGCCCGTATCGGCACGCTCAGCAACGACGTCATCGACGAATAGGCCGCACAAGACGGCATG ACCGGATCGGGAGGAAACCC
Downstream 100 bases:
>100_bases CGGACGCCAACGTCCCGCTGATCGCGCCGGCAGGCGCCATCGGAACCTGCCTTGCTCTGCAAAAAGGTCCGTCATGACGT TCGACATCGCGCTGTTCCTG
Product: branched-chain amino acid ABC transporter periplasmic amino acid binding protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid ABC Transporter; Branched-Chain Amino Acid Transporter; Amino Acid ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKLQALALGAAILVLPLTGSLAQEIKLGATLSTTGPAASLGIPMKNTLQILPKEIEGVPVSWTILDDGTDTTQARRNAEK LASENVDLIIGGNTTPTSLATVEIAGRTQTPVLAIAPSPGIIEPVEGAKTWVFKVPLGERELAERTLASMSQRGVKTIGF IGFNDALGEGWLKEFERFAPKFGITISAVEKFARTDTSVVAQALKVLAARPDAVFVGATGTPAVLPTAQLRERGYKGLIY QASGVVNNDFLRVGGKNVDGVLIAAGPLLVASALPDANPSKATSLDFVKLYEATYGPGSASLFAGNAYDAWLLIRNAMSS ALKVAKPGTPEFRAALRSALEKTDGLAVTNGVITFGPNNHGIFPPGTPVMLTVRNGTWALAN
Sequences:
>Translated_382_residues MKLQALALGAAILVLPLTGSLAQEIKLGATLSTTGPAASLGIPMKNTLQILPKEIEGVPVSWTILDDGTDTTQARRNAEK LASENVDLIIGGNTTPTSLATVEIAGRTQTPVLAIAPSPGIIEPVEGAKTWVFKVPLGERELAERTLASMSQRGVKTIGF IGFNDALGEGWLKEFERFAPKFGITISAVEKFARTDTSVVAQALKVLAARPDAVFVGATGTPAVLPTAQLRERGYKGLIY QASGVVNNDFLRVGGKNVDGVLIAAGPLLVASALPDANPSKATSLDFVKLYEATYGPGSASLFAGNAYDAWLLIRNAMSS ALKVAKPGTPEFRAALRSALEKTDGLAVTNGVITFGPNNHGIFPPGTPVMLTVRNGTWALAN >Mature_382_residues MKLQALALGAAILVLPLTGSLAQEIKLGATLSTTGPAASLGIPMKNTLQILPKEIEGVPVSWTILDDGTDTTQARRNAEK LASENVDLIIGGNTTPTSLATVEIAGRTQTPVLAIAPSPGIIEPVEGAKTWVFKVPLGERELAERTLASMSQRGVKTIGF IGFNDALGEGWLKEFERFAPKFGITISAVEKFARTDTSVVAQALKVLAARPDAVFVGATGTPAVLPTAQLRERGYKGLIY QASGVVNNDFLRVGGKNVDGVLIAAGPLLVASALPDANPSKATSLDFVKLYEATYGPGSASLFAGNAYDAWLLIRNAMSS ALKVAKPGTPEFRAALRSALEKTDGLAVTNGVITFGPNNHGIFPPGTPVMLTVRNGTWALAN
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39897; Mature: 39897
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQALALGAAILVLPLTGSLAQEIKLGATLSTTGPAASLGIPMKNTLQILPKEIEGVPV CCCHHHHHCEEEEEEECCCHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCE SWTILDDGTDTTQARRNAEKLASENVDLIIGGNTTPTSLATVEIAGRTQTPVLAIAPSPG EEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCC IIEPVEGAKTWVFKVPLGERELAERTLASMSQRGVKTIGFIGFNDALGEGWLKEFERFAP CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCC KFGITISAVEKFARTDTSVVAQALKVLAARPDAVFVGATGTPAVLPTAQLRERGYKGLIY CCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEE QASGVVNNDFLRVGGKNVDGVLIAAGPLLVASALPDANPSKATSLDFVKLYEATYGPGSA EECCCCCCCEEEECCCCCCEEEEEECHHHHHHCCCCCCCCCCCCHHHEEEEHHCCCCCCC SLFAGNAYDAWLLIRNAMSSALKVAKPGTPEFRAALRSALEKTDGLAVTNGVITFGPNNH EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCC GIFPPGTPVMLTVRNGTWALAN CCCCCCCCEEEEEECCEEEECC >Mature Secondary Structure MKLQALALGAAILVLPLTGSLAQEIKLGATLSTTGPAASLGIPMKNTLQILPKEIEGVPV CCCHHHHHCEEEEEEECCCHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCE SWTILDDGTDTTQARRNAEKLASENVDLIIGGNTTPTSLATVEIAGRTQTPVLAIAPSPG EEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCC IIEPVEGAKTWVFKVPLGERELAERTLASMSQRGVKTIGFIGFNDALGEGWLKEFERFAP CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCC KFGITISAVEKFARTDTSVVAQALKVLAARPDAVFVGATGTPAVLPTAQLRERGYKGLIY CCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEE QASGVVNNDFLRVGGKNVDGVLIAAGPLLVASALPDANPSKATSLDFVKLYEATYGPGSA EECCCCCCCEEEECCCCCCEEEEEECHHHHHHCCCCCCCCCCCCHHHEEEEHHCCCCCCC SLFAGNAYDAWLLIRNAMSSALKVAKPGTPEFRAALRSALEKTDGLAVTNGVITFGPNNH EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCC GIFPPGTPVMLTVRNGTWALAN CCCCCCCCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA