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The map label for this gene is citE [H]

Identifier: 158423501

GI number: 158423501

Start: 2151340

End: 2152224

Strand: Direct

Name: citE [H]

Synonym: AZC_1877

Alternate gene names: 158423501

Gene position: 2151340-2152224 (Clockwise)

Preceding gene: 158423500

Following gene: 158423502

Centisome position: 40.06

GC content: 62.6

Gene sequence:

>885_bases
ATGATGCGCTCTCTCCTGTTCGTTCCCGCAGATAGCCGGCGAAAATTCGAGAAGGCGTCGATGAGCAAGGCGGATGCCCT
GATCCTGGATCTCGAGGATTCGGTCGCGCCCGCCATGAAAGCCGAAGCGCGAGAGCTTCTCGGGTCTCTACTTGCGGCGC
CGCGGCGGCAGAAGCTGTTTGTGCGCGTCAACGCCCTGGAGACGGGCCTCGTCCCCCTTGACCTCGCCGCAATCATGCCG
GGGGGGCCCGACGGCATTGTGCTTCCGAAATGCTCGGGCCCGGATGCGGTGCGCCAGCTGGGGCATTATCTTGATGTCGG
TGAGGCTTGGCAGGACGCCAGTGGCGCGCAGGTCGGCAGCACCCGCATCCTCGCCATCGTCACGGAAACGGCTGAGAGCG
TGCGCGCCCTTGCAGCATGTTCCTATGCCAATGTCAGTCCGCGGCTATGGGGGATGATGTGGGGTAGAGAGGATTTGACC
GCCTCTCTCGGTGCCTCGCCAAACAACGGGGGCGATTCCTATCGCGAACCCATCCGCCTTGCGCGAAATCTCTGCTTGAT
AGCTGCCGCTGCGGCGGGTGTGGAAGCTATCGATGCCGTCGCCCCAGACATCGACAATCTCCATGCGATCGCAGTCGAAG
CGCAGGAGGCCCGGAGAGACGGCTTTTCAGGTAAGGCGATCATTCACCCGACCCATGTCGAGCCAGTCCATGCCGCGTTC
ACTCCGGCACCAGAAGAAGTGGCGTGGGCCCTACGTGTCTGTGAAGCATTTGCCAGCCAGCCTGACGCCGGGGTCCTGAA
GCTAGACGGCAAGATGGTGGACAAGCCCCATCTGAGGGCAGCCGAACGCATCTTGGGGCAGACGAATTGGCCTGCTTCAG
CATGA

Upstream 100 bases:

>100_bases
CGGGCATCGTCGAGTTCGAGCATATCGCCTTGAACCAGGAGGGAGAAATCGTCGCCTCCTGTCGCCGCTCGGCACTGATG
CACCGCCGCGTCGAGGTCGC

Downstream 100 bases:

>100_bases
ACGCGATCTACGCTTCCGTGAACTTCGGCGCCTTCATGGAACTCTCCTCTTCCCCGAGCCGGGGATCATAAGCGGAAAAT
TCCAGCTCAAACGCGCCAGA

Product: citrate lyase beta chain

Products: NA

Alternate protein names: Citrase beta chain; Citrate (pro-3S)-lyase subunit beta; Citryl-CoA lyase subunit [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MMRSLLFVPADSRRKFEKASMSKADALILDLEDSVAPAMKAEARELLGSLLAAPRRQKLFVRVNALETGLVPLDLAAIMP
GGPDGIVLPKCSGPDAVRQLGHYLDVGEAWQDASGAQVGSTRILAIVTETAESVRALAACSYANVSPRLWGMMWGREDLT
ASLGASPNNGGDSYREPIRLARNLCLIAAAAAGVEAIDAVAPDIDNLHAIAVEAQEARRDGFSGKAIIHPTHVEPVHAAF
TPAPEEVAWALRVCEAFASQPDAGVLKLDGKMVDKPHLRAAERILGQTNWPASA

Sequences:

>Translated_294_residues
MMRSLLFVPADSRRKFEKASMSKADALILDLEDSVAPAMKAEARELLGSLLAAPRRQKLFVRVNALETGLVPLDLAAIMP
GGPDGIVLPKCSGPDAVRQLGHYLDVGEAWQDASGAQVGSTRILAIVTETAESVRALAACSYANVSPRLWGMMWGREDLT
ASLGASPNNGGDSYREPIRLARNLCLIAAAAAGVEAIDAVAPDIDNLHAIAVEAQEARRDGFSGKAIIHPTHVEPVHAAF
TPAPEEVAWALRVCEAFASQPDAGVLKLDGKMVDKPHLRAAERILGQTNWPASA
>Mature_294_residues
MMRSLLFVPADSRRKFEKASMSKADALILDLEDSVAPAMKAEARELLGSLLAAPRRQKLFVRVNALETGLVPLDLAAIMP
GGPDGIVLPKCSGPDAVRQLGHYLDVGEAWQDASGAQVGSTRILAIVTETAESVRALAACSYANVSPRLWGMMWGREDLT
ASLGASPNNGGDSYREPIRLARNLCLIAAAAAGVEAIDAVAPDIDNLHAIAVEAQEARRDGFSGKAIIHPTHVEPVHAAF
TPAPEEVAWALRVCEAFASQPDAGVLKLDGKMVDKPHLRAAERILGQTNWPASA

Specific function: Represents a citryl-ACP lyase [H]

COG id: COG2301

COG function: function code G; Citrate lyase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HpcH/HpaI aldolase family. Citrate lyase beta subunit subfamily [H]

Homologues:

Organism=Homo sapiens, GI45545437, Length=296, Percent_Identity=29.3918918918919, Blast_Score=109, Evalue=2e-24,
Organism=Escherichia coli, GI87081764, Length=292, Percent_Identity=34.2465753424658, Blast_Score=112, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17557458, Length=302, Percent_Identity=28.476821192053, Blast_Score=105, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005000
- InterPro:   IPR011206
- InterPro:   IPR006475
- InterPro:   IPR015813 [H]

Pfam domain/function: PF03328 HpcH_HpaI [H]

EC number: =4.1.3.6; =4.1.3.34 [H]

Molecular weight: Translated: 31209; Mature: 31209

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSLLFVPADSRRKFEKASMSKADALILDLEDSVAPAMKAEARELLGSLLAAPRRQKLF
CCCCEEECCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VRVNALETGLVPLDLAAIMPGGPDGIVLPKCSGPDAVRQLGHYLDVGEAWQDASGAQVGS
EEEECHHCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHCCCCCCCCCC
TRILAIVTETAESVRALAACSYANVSPRLWGMMWGREDLTASLGASPNNGGDSYREPIRL
CEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHH
ARNLCLIAAAAAGVEAIDAVAPDIDNLHAIAVEAQEARRDGFSGKAIIHPTHVEPVHAAF
HHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCCEEEECCCCCCCHHCC
TPAPEEVAWALRVCEAFASQPDAGVLKLDGKMVDKPHLRAAERILGQTNWPASA
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMRSLLFVPADSRRKFEKASMSKADALILDLEDSVAPAMKAEARELLGSLLAAPRRQKLF
CCCCEEECCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VRVNALETGLVPLDLAAIMPGGPDGIVLPKCSGPDAVRQLGHYLDVGEAWQDASGAQVGS
EEEECHHCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHCCCCCCCCCC
TRILAIVTETAESVRALAACSYANVSPRLWGMMWGREDLTASLGASPNNGGDSYREPIRL
CEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHH
ARNLCLIAAAAAGVEAIDAVAPDIDNLHAIAVEAQEARRDGFSGKAIIHPTHVEPVHAAF
HHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCCEEEECCCCCCCHHCC
TPAPEEVAWALRVCEAFASQPDAGVLKLDGKMVDKPHLRAAERILGQTNWPASA
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]