Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is tatB [H]
Identifier: 158423361
GI number: 158423361
Start: 1987909
End: 1988526
Strand: Direct
Name: tatB [H]
Synonym: AZC_1737
Alternate gene names: 158423361
Gene position: 1987909-1988526 (Clockwise)
Preceding gene: 158423360
Following gene: 158423362
Centisome position: 37.02
GC content: 70.39
Gene sequence:
>618_bases ATGTTCGATATCGGCTGGTCGGAGTTCATGTTGATCGGCGTCGTGGCGCTGATCGTCATCGGCCCCAAGGAACTGCCGTC CGTGCTGCGGACGGTGGGCAAGACGGTCACGAAGCTGCGCCGCATGGCGGGCGAGTTCCAGGGGCAGTTCAACGAGGCGT TGCGCGAGGCCGAACTGTCCGACATCCGCAACGATATCGGCAACATCGTCGGCGGCGTGAAGGACAGCGTCACCAAGTCC TTCCCCGGCACCGAGGCGTTCGACCCCCTGCGCAACATCCGCGAGGACATCCGCGCCTCGGTGGAGAGCGCCACCAAGCC GCCGGAGGCGGCGGTGGCTCCCGAGGCGCCGGCGGTGCCGGCCTATGATCCCCATCGCGAGATGCGCGAAGCCATTGCGG GCGCCGTTGCCAAGGCGACCGGCAGCACCGCTGCGGCTGCCGCAACGGTTACCCCGCTCGCGGCCGCACCGACGGTTGCG GTGGAGCGCGCGCCGGCCGAGCCTCTCGTGCCCCTGCCGGGGCCGGCGGCGGAACCGGTGCTCGACACCGGCACCGATCT GTCGCAGAACCACGGCGCGCCTGCGCAGGCCGAGCACAAGTCTGCCACCGGCGCGTGA
Upstream 100 bases:
>100_bases TCCGCGCGGCACTGAAGCGTTACCCCATCCGGCACCTGCGTTCCGCCAGGTGCCGTTGGCATGAAAGGGCCGCGGTTCCC GCCGCAGGCAGAGAGCCGTC
Downstream 100 bases:
>100_bases CGCAGCGGAACAATCGAGGCATACGGACCTGACATGAGCGAGGAGGAAATCGACGCCTCGAAGGCCCCGCTGATCGAGCA TCTGATCGAACTGCGCGCGC
Product: twin-arginine translocation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MFDIGWSEFMLIGVVALIVIGPKELPSVLRTVGKTVTKLRRMAGEFQGQFNEALREAELSDIRNDIGNIVGGVKDSVTKS FPGTEAFDPLRNIREDIRASVESATKPPEAAVAPEAPAVPAYDPHREMREAIAGAVAKATGSTAAAAATVTPLAAAPTVA VERAPAEPLVPLPGPAAEPVLDTGTDLSQNHGAPAQAEHKSATGA
Sequences:
>Translated_205_residues MFDIGWSEFMLIGVVALIVIGPKELPSVLRTVGKTVTKLRRMAGEFQGQFNEALREAELSDIRNDIGNIVGGVKDSVTKS FPGTEAFDPLRNIREDIRASVESATKPPEAAVAPEAPAVPAYDPHREMREAIAGAVAKATGSTAAAAATVTPLAAAPTVA VERAPAEPLVPLPGPAAEPVLDTGTDLSQNHGAPAQAEHKSATGA >Mature_205_residues MFDIGWSEFMLIGVVALIVIGPKELPSVLRTVGKTVTKLRRMAGEFQGQFNEALREAELSDIRNDIGNIVGGVKDSVTKS FPGTEAFDPLRNIREDIRASVESATKPPEAAVAPEAPAVPAYDPHREMREAIAGAVAKATGSTAAAAATVTPLAAAPTVA VERAPAEPLVPLPGPAAEPVLDTGTDLSQNHGAPAQAEHKSATGA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
Organism=Escherichia coli, GI48994984, Length=178, Percent_Identity=29.7752808988764, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21234; Mature: 21234
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDIGWSEFMLIGVVALIVIGPKELPSVLRTVGKTVTKLRRMAGEFQGQFNEALREAELS CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIRNDIGNIVGGVKDSVTKSFPGTEAFDPLRNIREDIRASVESATKPPEAAVAPEAPAVP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AYDPHREMREAIAGAVAKATGSTAAAAATVTPLAAAPTVAVERAPAEPLVPLPGPAAEPV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC LDTGTDLSQNHGAPAQAEHKSATGA CCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MFDIGWSEFMLIGVVALIVIGPKELPSVLRTVGKTVTKLRRMAGEFQGQFNEALREAELS CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIRNDIGNIVGGVKDSVTKSFPGTEAFDPLRNIREDIRASVESATKPPEAAVAPEAPAVP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AYDPHREMREAIAGAVAKATGSTAAAAATVTPLAAAPTVAVERAPAEPLVPLPGPAAEPV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC LDTGTDLSQNHGAPAQAEHKSATGA CCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA