Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423351
Identifier: 158423351
GI number: 158423351
Start: 1976781
End: 1977752
Strand: Direct
Name: 158423351
Synonym: AZC_1727
Alternate gene names: NA
Gene position: 1976781-1977752 (Clockwise)
Preceding gene: 158423350
Following gene: 158423352
Centisome position: 36.81
GC content: 72.63
Gene sequence:
>972_bases ATGAGGCGGGGTGTGCGGGCGCTCGCCGGCTGCGTTGTGCTGCTCCTGCTGGCGTCGAACGGGGCATCACCCGCGGCGGC AGCACCGCAGCGGCCGCCAGCCTCGGTGAGCCAGCCGCACCCGCCGCCAGCGCCCGTGCGGGCCGCGAAGCGACAGGGGC GTCTGCCGCCCGATGGGGCGCCGCTCCCTGTCCCGTCGCCTCTGCGCATGGCGGTAGATGCCGTGAAGCGGCAGGGCCTG CTGGGCGCGCCGACGGTTCCGCTGCCTCTGCCGCGTCCCGTGGAGATCGGCGGAAAGCCGGCCGCGCCGCCGGTTGCCGA GGCACCCACGCCCACGCCCCAGCCCAAGCCGGACATTGCGCCCGAGGACAGTGCCCCGACGCCCGAGCCCATGGAGGGCG AGGCCTATGCCGCCTGCCTCAAGACGTTCGAGGCCAGGGGCGGAGAGCCCGTGCCGCGGGAGCAGGGGGAGGGCACGTCG GACGGCGATGGCGCCTGCACCATTCCCGGCGCCGTCACCTTTTCCCGTATCAAGCTGGTGGAGGGCGGCACGGTGGCGCT GGAAAGTGCCGTCACCGTGCGGTGCACGCTGGCGGTGGAACTCGCCGGATGGGTGCGGGAGGATCTGGCGCCGCTGGTGC AGCGTCAGGGCGGCGAACTCTCCGGCCTCACCGGCGTCGGCGGGCAGGCCTGCCGCCCGCGCAACGGCCAGAAGGGCGCG CAGATCAGCGAGCACGCCAGCGGCAATGCCTTCGATCTCCTCGGCCTCAAGCTGAAGGACGGCAAGGTGGTCGAGCTGTG GAAGGCAGAGGCAGGAACGAAGGATCTGCGCGCGGGCGTGCGCGAGAGCGCCTGTGCCCGGTTCCGCACGGTGCTGGGGC CGGGAGCGGATAGCGCCCACGCCAACCATGTGCATCTCGACATGCGCCAGCGCCGCAACGATTTCCGCATGTGCCAGTGG AATGTGGACTAG
Upstream 100 bases:
>100_bases CCTCCCACGGCTGTGTGCGCCTCACCAATTGGGATGCGGAGGAAGTGGCGGCCCTCATCAAGCCGGGCGTGAAGATGCGC TTCGTCGAGCCCTCCGGCTC
Downstream 100 bases:
>100_bases GCGGGCGCCCGCGCCCCCGTGTTTCAATGGGGCGCGAAGGTGCTTTACAGTCGCATCGTCAGGGGGCGCTTGGCATGACC GACAGTGAAGCCGAACGGGC
Product: extensin-like protein C-terminus
Products: NA
Alternate protein names: Extensin-Like; Extensin-Like Protein; Extensin-Like Protein C-Terminus
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MRRGVRALAGCVVLLLLASNGASPAAAAPQRPPASVSQPHPPPAPVRAAKRQGRLPPDGAPLPVPSPLRMAVDAVKRQGL LGAPTVPLPLPRPVEIGGKPAAPPVAEAPTPTPQPKPDIAPEDSAPTPEPMEGEAYAACLKTFEARGGEPVPREQGEGTS DGDGACTIPGAVTFSRIKLVEGGTVALESAVTVRCTLAVELAGWVREDLAPLVQRQGGELSGLTGVGGQACRPRNGQKGA QISEHASGNAFDLLGLKLKDGKVVELWKAEAGTKDLRAGVRESACARFRTVLGPGADSAHANHVHLDMRQRRNDFRMCQW NVD
Sequences:
>Translated_323_residues MRRGVRALAGCVVLLLLASNGASPAAAAPQRPPASVSQPHPPPAPVRAAKRQGRLPPDGAPLPVPSPLRMAVDAVKRQGL LGAPTVPLPLPRPVEIGGKPAAPPVAEAPTPTPQPKPDIAPEDSAPTPEPMEGEAYAACLKTFEARGGEPVPREQGEGTS DGDGACTIPGAVTFSRIKLVEGGTVALESAVTVRCTLAVELAGWVREDLAPLVQRQGGELSGLTGVGGQACRPRNGQKGA QISEHASGNAFDLLGLKLKDGKVVELWKAEAGTKDLRAGVRESACARFRTVLGPGADSAHANHVHLDMRQRRNDFRMCQW NVD >Mature_323_residues MRRGVRALAGCVVLLLLASNGASPAAAAPQRPPASVSQPHPPPAPVRAAKRQGRLPPDGAPLPVPSPLRMAVDAVKRQGL LGAPTVPLPLPRPVEIGGKPAAPPVAEAPTPTPQPKPDIAPEDSAPTPEPMEGEAYAACLKTFEARGGEPVPREQGEGTS DGDGACTIPGAVTFSRIKLVEGGTVALESAVTVRCTLAVELAGWVREDLAPLVQRQGGELSGLTGVGGQACRPRNGQKGA QISEHASGNAFDLLGLKLKDGKVVELWKAEAGTKDLRAGVRESACARFRTVLGPGADSAHANHVHLDMRQRRNDFRMCQW NVD
Specific function: Unknown
COG id: COG3921
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33598; Mature: 33598
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGVRALAGCVVLLLLASNGASPAAAAPQRPPASVSQPHPPPAPVRAAKRQGRLPPDGA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC PLPVPSPLRMAVDAVKRQGLLGAPTVPLPLPRPVEIGGKPAAPPVAEAPTPTPQPKPDIA CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEDSAPTPEPMEGEAYAACLKTFEARGGEPVPREQGEGTSDGDGACTIPGAVTFSRIKLV CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE EGGTVALESAVTVRCTLAVELAGWVREDLAPLVQRQGGELSGLTGVGGQACRPRNGQKGA CCCCEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QISEHASGNAFDLLGLKLKDGKVVELWKAEAGTKDLRAGVRESACARFRTVLGPGADSAH CHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ANHVHLDMRQRRNDFRMCQWNVD CCEEEEHHHHCCCCCEEEEECCC >Mature Secondary Structure MRRGVRALAGCVVLLLLASNGASPAAAAPQRPPASVSQPHPPPAPVRAAKRQGRLPPDGA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC PLPVPSPLRMAVDAVKRQGLLGAPTVPLPLPRPVEIGGKPAAPPVAEAPTPTPQPKPDIA CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEDSAPTPEPMEGEAYAACLKTFEARGGEPVPREQGEGTSDGDGACTIPGAVTFSRIKLV CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE EGGTVALESAVTVRCTLAVELAGWVREDLAPLVQRQGGELSGLTGVGGQACRPRNGQKGA CCCCEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QISEHASGNAFDLLGLKLKDGKVVELWKAEAGTKDLRAGVRESACARFRTVLGPGADSAH CHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ANHVHLDMRQRRNDFRMCQWNVD CCEEEEHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA