Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423338
Identifier: 158423338
GI number: 158423338
Start: 1962460
End: 1964196
Strand: Direct
Name: 158423338
Synonym: AZC_1714
Alternate gene names: NA
Gene position: 1962460-1964196 (Clockwise)
Preceding gene: 158423333
Following gene: 158423340
Centisome position: 36.55
GC content: 68.74
Gene sequence:
>1737_bases ATGCGCCGCCCCGCCACGGCCATGCCGGCGCCTTGGTGGCTTCACACTGCCCGTGTGAAGCTTTATGCGGTTTTTTCGTC CCGCCTGCGTCTTGGCGCCCCAGGAGTCCCCATGTCCGTGTCCTATCGCTTGCCGCTGCTGCTGGCCCTCGTCGTGTCGG CGGCCGTGGTCGGGCTGTGGGTCTGGGCCGGCCGGCCCGTGGCCATGCCGCCCTCGCCGCTGGCGGCGGGCGAGAAGCTG CAATGCGTCTCCTATGCGCCCTTCCGCGAGGGGCAGTCGCCGCTCGATCCGGACCTCGTCATCCCCGAGAGCCAGATCGA CGACGATCTGGCGCAGCTCGCCAAGATCACCGATTGCGTGCGCACCTATTCGGTGGAAAAGGGCCTCGACAAGGTGGCGC CCATGGCCCGCAAGCACGGCCTGACCATGCTGCAGGGTGTGTGGCTGGGCAACGACCGGGCGAAGAACAAGGTGGAGGTG GACCAGGCGGTCGCGCTCGCCAAGGCCTATCCCGATGTCATCAAGGCGCTGGTGGTGGGGAACGAAGTGATGCTCCGCGG CGAACTCTCCGCCACCGACATCTCCGCCATCCTGAAGGATGTGAAGGCGCGCGTGGCGCCGGTTCAGGTGACCTATGCGG ACGTCTGGGAATTCTGGTCCCGCGCCCGCGCCCTCGCCAATGACGTTGACTTCATCACCATCCACATCCTGCCCTATTGG GAGGACCTGCCGGTCGCCGCCGACAAGGCCGGCCGCCATGTGGACGAGATCCGCCAGCACATGGCGCAGGAATTTCCCGG CAAGGACATCCTGATCGGCGAGACCGGCTGGCCGAGCGCCGGGCGCATGCGCGAGGGCGCGCTGCCGTCCCCCGCCGATC AGGCACTGGTCATGCATGACCTGATGCGCCTTGCGAAGGAGAAGGGCTATCGGGTCAATGTCATCGAGGCCTTCGACCAG CCCTGGAAGCGGGCGAACGAGGGCACGGTGGGTGGCCATTGGGGCCTCATCGATTCCGGCACCCGCGCGCCGAAATTCAT CTGGGGGCAGGGCGTTTCCAACCATCCCAACTGGCAGGCCCATGCGGTGGCCGGCGTCGTCGCCGTCTTCGCAAGCTTTG CCGCCGGCCTCTGGGGCGCGCGCCGAAGGGGCGCGGCCGTGCCGACCAAGGATTGGCTCGGCATTGCGGTGATCGCGTTC GCCGGTGGCGCGACGCTCGGTGCCGCCGTCTCCGCTCTGCCGCTGGAAAGCCTCGGGGTGGCCGGCTGGATGCGCAACGT CGGTTTCGTGCTGCTGGCGCTCCTGTCCGTGCTGGTGATTCCGGCCGTGATCGGGGCGGGCGTGCGTCTGCCGGCGCTGG CGGTGGCCCTTCATCCCGCCCGCCGTCGCACTGCTCCCGGCCTTCAGGTGGCGGCGGGCGTCATTTTCGCGCTGGCGGTG CTGGCCATCGGCGAGGTGGGCTTCGAGCTGGTGTTCAACTCCCGCTACAAGGACTTTCCCTATTTCCCGCTGACACCGGT GGCGCTCGCCGTGGCGGTGCTGGCGCTGCTGCGCCGACCGGCCGGGGAGGCGCGGAGCCTTGCGGAAGGTTTCGCCTTCT GGTGGCTGCTGTTCGCGGGCCTCTATATCCCGGTCAACGAGACGCTCCAGAACTGGCAGGCGCTGTGGTTCGGCGCCATC AGCCTCGTCGGTGCCCTCGCCCTGTGGCGGGTCCGGAGCGCCGCTCGCGTGGGGTGA
Upstream 100 bases:
>100_bases GGGCGACGACGCGCATCGGCGAAGCGACGCGCAAATTAGAAGAAGGCTATGAGTTTGTCAGCAAGAGGACGCGCGCAAGC TTAAATCTCGTCCCCACAAG
Downstream 100 bases:
>100_bases ACCCTGGGGCGGCTTTCACGCCGCCGGCCGGGTGCCGGCGGAGGGCGCCTGAACGCGATAGCGAGCGGCTCAGGCCCGTC CGGGTCGGGCGAGGGAGAGC
Product: beta (1-6) glucans synthase precursor
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycoside Hydrolase Family Protein; Beta Glucan Synthase; Glycosyl Hydrolase; Beta-(1-3)-Glucosyl Transferase; Glycosyltransferase; Family 2 Glycosyl Transferase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Glycosyl Transferase Group 2 Family Protein; Beta-(1-3)-Glucosyl Transferase NdvB-Like; Exo-Beta-1 3-Glucanase-Like; Glycosyl Transferase Family 2 Protein; Glycoside Hydrolase Family; Beta Glucans Synthase NdvC-Like; Glucans Synthase; Exo-Beta-1 3-Glucanase-Like Protein; Exo-Beta-1 3-Glucanase; Glycosyl Hydrolases Family; Glucosyl Transferase; Cellulose Synthase Catalytic Subunit
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MRRPATAMPAPWWLHTARVKLYAVFSSRLRLGAPGVPMSVSYRLPLLLALVVSAAVVGLWVWAGRPVAMPPSPLAAGEKL QCVSYAPFREGQSPLDPDLVIPESQIDDDLAQLAKITDCVRTYSVEKGLDKVAPMARKHGLTMLQGVWLGNDRAKNKVEV DQAVALAKAYPDVIKALVVGNEVMLRGELSATDISAILKDVKARVAPVQVTYADVWEFWSRARALANDVDFITIHILPYW EDLPVAADKAGRHVDEIRQHMAQEFPGKDILIGETGWPSAGRMREGALPSPADQALVMHDLMRLAKEKGYRVNVIEAFDQ PWKRANEGTVGGHWGLIDSGTRAPKFIWGQGVSNHPNWQAHAVAGVVAVFASFAAGLWGARRRGAAVPTKDWLGIAVIAF AGGATLGAAVSALPLESLGVAGWMRNVGFVLLALLSVLVIPAVIGAGVRLPALAVALHPARRRTAPGLQVAAGVIFALAV LAIGEVGFELVFNSRYKDFPYFPLTPVALAVAVLALLRRPAGEARSLAEGFAFWWLLFAGLYIPVNETLQNWQALWFGAI SLVGALALWRVRSAARVG
Sequences:
>Translated_578_residues MRRPATAMPAPWWLHTARVKLYAVFSSRLRLGAPGVPMSVSYRLPLLLALVVSAAVVGLWVWAGRPVAMPPSPLAAGEKL QCVSYAPFREGQSPLDPDLVIPESQIDDDLAQLAKITDCVRTYSVEKGLDKVAPMARKHGLTMLQGVWLGNDRAKNKVEV DQAVALAKAYPDVIKALVVGNEVMLRGELSATDISAILKDVKARVAPVQVTYADVWEFWSRARALANDVDFITIHILPYW EDLPVAADKAGRHVDEIRQHMAQEFPGKDILIGETGWPSAGRMREGALPSPADQALVMHDLMRLAKEKGYRVNVIEAFDQ PWKRANEGTVGGHWGLIDSGTRAPKFIWGQGVSNHPNWQAHAVAGVVAVFASFAAGLWGARRRGAAVPTKDWLGIAVIAF AGGATLGAAVSALPLESLGVAGWMRNVGFVLLALLSVLVIPAVIGAGVRLPALAVALHPARRRTAPGLQVAAGVIFALAV LAIGEVGFELVFNSRYKDFPYFPLTPVALAVAVLALLRRPAGEARSLAEGFAFWWLLFAGLYIPVNETLQNWQALWFGAI SLVGALALWRVRSAARVG >Mature_578_residues MRRPATAMPAPWWLHTARVKLYAVFSSRLRLGAPGVPMSVSYRLPLLLALVVSAAVVGLWVWAGRPVAMPPSPLAAGEKL QCVSYAPFREGQSPLDPDLVIPESQIDDDLAQLAKITDCVRTYSVEKGLDKVAPMARKHGLTMLQGVWLGNDRAKNKVEV DQAVALAKAYPDVIKALVVGNEVMLRGELSATDISAILKDVKARVAPVQVTYADVWEFWSRARALANDVDFITIHILPYW EDLPVAADKAGRHVDEIRQHMAQEFPGKDILIGETGWPSAGRMREGALPSPADQALVMHDLMRLAKEKGYRVNVIEAFDQ PWKRANEGTVGGHWGLIDSGTRAPKFIWGQGVSNHPNWQAHAVAGVVAVFASFAAGLWGARRRGAAVPTKDWLGIAVIAF AGGATLGAAVSALPLESLGVAGWMRNVGFVLLALLSVLVIPAVIGAGVRLPALAVALHPARRRTAPGLQVAAGVIFALAV LAIGEVGFELVFNSRYKDFPYFPLTPVALAVAVLALLRRPAGEARSLAEGFAFWWLLFAGLYIPVNETLQNWQALWFGAI SLVGALALWRVRSAARVG
Specific function: Unknown
COG id: COG5309
COG function: function code G; Exo-beta-1,3-glucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321721, Length=258, Percent_Identity=27.1317829457364, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6321410, Length=269, Percent_Identity=22.6765799256506, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323964, Length=261, Percent_Identity=22.2222222222222, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62352; Mature: 62352
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00587 GLYCOSYL_HYDROL_F17
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPATAMPAPWWLHTARVKLYAVFSSRLRLGAPGVPMSVSYRLPLLLALVVSAAVVGLW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHH VWAGRPVAMPPSPLAAGEKLQCVSYAPFREGQSPLDPDLVIPESQIDDDLAQLAKITDCV HHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH RTYSVEKGLDKVAPMARKHGLTMLQGVWLGNDRAKNKVEVDQAVALAKAYPDVIKALVVG HHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC NEVMLRGELSATDISAILKDVKARVAPVQVTYADVWEFWSRARALANDVDFITIHILPYW CCEEEECCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECC EDLPVAADKAGRHVDEIRQHMAQEFPGKDILIGETGWPSAGRMREGALPSPADQALVMHD CCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH LMRLAKEKGYRVNVIEAFDQPWKRANEGTVGGHWGLIDSGTRAPKFIWGQGVSNHPNWQA HHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHH HAVAGVVAVFASFAAGLWGARRRGAAVPTKDWLGIAVIAFAGGATLGAAVSALPLESLGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH AGWMRNVGFVLLALLSVLVIPAVIGAGVRLPALAVALHPARRRTAPGLQVAAGVIFALAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHH LAIGEVGFELVFNSRYKDFPYFPLTPVALAVAVLALLRRPAGEARSLAEGFAFWWLLFAG HHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LYIPVNETLQNWQALWFGAISLVGALALWRVRSAARVG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRPATAMPAPWWLHTARVKLYAVFSSRLRLGAPGVPMSVSYRLPLLLALVVSAAVVGLW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHH VWAGRPVAMPPSPLAAGEKLQCVSYAPFREGQSPLDPDLVIPESQIDDDLAQLAKITDCV HHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH RTYSVEKGLDKVAPMARKHGLTMLQGVWLGNDRAKNKVEVDQAVALAKAYPDVIKALVVG HHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC NEVMLRGELSATDISAILKDVKARVAPVQVTYADVWEFWSRARALANDVDFITIHILPYW CCEEEECCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECC EDLPVAADKAGRHVDEIRQHMAQEFPGKDILIGETGWPSAGRMREGALPSPADQALVMHD CCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH LMRLAKEKGYRVNVIEAFDQPWKRANEGTVGGHWGLIDSGTRAPKFIWGQGVSNHPNWQA HHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHH HAVAGVVAVFASFAAGLWGARRRGAAVPTKDWLGIAVIAFAGGATLGAAVSALPLESLGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH AGWMRNVGFVLLALLSVLVIPAVIGAGVRLPALAVALHPARRRTAPGLQVAAGVIFALAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHH LAIGEVGFELVFNSRYKDFPYFPLTPVALAVAVLALLRRPAGEARSLAEGFAFWWLLFAG HHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LYIPVNETLQNWQALWFGAISLVGALALWRVRSAARVG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA