Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423186
Identifier: 158423186
GI number: 158423186
Start: 1777934
End: 1778446
Strand: Reverse
Name: 158423186
Synonym: AZC_1562
Alternate gene names: NA
Gene position: 1778446-1777934 (Counterclockwise)
Preceding gene: 158423187
Following gene: 158423183
Centisome position: 33.12
GC content: 65.69
Gene sequence:
>513_bases TTGCCATACACAGGTACGGTCGCCAAGCTATTCCCTCATTCACCCGAGGGGACGGGCATGGCGATAACTCTTGGCTCGCA GACCGTTGCAGCACCGAAGTTCCGGGTGCGCGCCGTTCATGTGGCCATCGTGTCGCTTGCCCTTGCTGCCGCGGCCCTCG TGGCGGAGCGCTCCGGCAGGACCGCACACACCTTCTCCGCGCCCCTCTTCGAGATCAAGGTTTCCGCCCGCGACGCCTGC AACGTGCTGCATGCGCGCATGGTTCGGGTCACCGGTGACGCCAACACCCCCGCCTTCACCGACTGCCCCGGCCGCACCAC CATGGTCTGGCATGATCCCATGACCCGGACTTTCGTGGTGCGGGATCAATATGCAAATCCCGAGAGCAGCGGCGCTCCGG CCGTGCTGCGCTATCTCGGCCGCGCGGAATATGTGGTGCGCGCGAATGGCGCCCTTGTCTGGACCAGCACCTCCGTCACC CGCATCATGGCCGAGGGCGACGAGGCCGAATGA
Upstream 100 bases:
>100_bases GCGTCTCCGCCGCCCAGCCGACCTTTCTTGCCCAGGCGTGGCCGCCAGGACACGCAGCACGCGTGCCTGAATTATATGCG CGCCTGCCGCGAATCATCGC
Downstream 100 bases:
>100_bases GCCTTGCACCCCAGGAACGGCCGCAGGCTCAAAAGCCTCAAGCGGGATCACTTTCAAGGCACGGGTGCCCTTCCTCCTAT TTCCAGATGCCGCTGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPYTGTVAKLFPHSPEGTGMAITLGSQTVAAPKFRVRAVHVAIVSLALAAAALVAERSGRTAHTFSAPLFEIKVSARDAC NVLHARMVRVTGDANTPAFTDCPGRTTMVWHDPMTRTFVVRDQYANPESSGAPAVLRYLGRAEYVVRANGALVWTSTSVT RIMAEGDEAE
Sequences:
>Translated_170_residues MPYTGTVAKLFPHSPEGTGMAITLGSQTVAAPKFRVRAVHVAIVSLALAAAALVAERSGRTAHTFSAPLFEIKVSARDAC NVLHARMVRVTGDANTPAFTDCPGRTTMVWHDPMTRTFVVRDQYANPESSGAPAVLRYLGRAEYVVRANGALVWTSTSVT RIMAEGDEAE >Mature_169_residues PYTGTVAKLFPHSPEGTGMAITLGSQTVAAPKFRVRAVHVAIVSLALAAAALVAERSGRTAHTFSAPLFEIKVSARDACN VLHARMVRVTGDANTPAFTDCPGRTTMVWHDPMTRTFVVRDQYANPESSGAPAVLRYLGRAEYVVRANGALVWTSTSVTR IMAEGDEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18188; Mature: 18057
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYTGTVAKLFPHSPEGTGMAITLGSQTVAAPKFRVRAVHVAIVSLALAAAALVAERSGR CCCCCCCCEECCCCCCCCEEEEEECCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCC TAHTFSAPLFEIKVSARDACNVLHARMVRVTGDANTPAFTDCPGRTTMVWHDPMTRTFVV EEEEECCCEEEEEECCHHHHHHHHHEEEEEECCCCCCCEECCCCCEEEEEECCCCEEEEE RDQYANPESSGAPAVLRYLGRAEYVVRANGALVWTSTSVTRIMAEGDEAE EECCCCCCCCCCHHHHHHHCCCEEEEEECCEEEEECCCEEEEEECCCCCC >Mature Secondary Structure PYTGTVAKLFPHSPEGTGMAITLGSQTVAAPKFRVRAVHVAIVSLALAAAALVAERSGR CCCCCCCEECCCCCCCCEEEEEECCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCC TAHTFSAPLFEIKVSARDACNVLHARMVRVTGDANTPAFTDCPGRTTMVWHDPMTRTFVV EEEEECCCEEEEEECCHHHHHHHHHEEEEEECCCCCCCEECCCCCEEEEEECCCCEEEEE RDQYANPESSGAPAVLRYLGRAEYVVRANGALVWTSTSVTRIMAEGDEAE EECCCCCCCCCCHHHHHHHCCCEEEEEECCEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA