Definition | Azorhizobium caulinodans ORS 571, complete genome. |
---|---|
Accession | NC_009937 |
Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is ate
Identifier: 158423164
GI number: 158423164
Start: 1752150
End: 1752899
Strand: Reverse
Name: ate
Synonym: AZC_1540
Alternate gene names: 158423164
Gene position: 1752899-1752150 (Counterclockwise)
Preceding gene: 158423165
Following gene: 158423163
Centisome position: 32.64
GC content: 65.6
Gene sequence:
>750_bases GTGACCGAACATTCGCGCGACACGCCGCAATTCTATCTGACCGCCCCCTCCCCTTGCCCCTATCTGCCGGGGAAGGAGGA GCGGAAGGTGTTCACCCATCTGGTGGGTGAACGCGCGGGTGCGCTCAATGACGTGCTCACCCAGGGCGGCTTCCGGCGCA GCCAGTCCATTGCCTACCGCCCCGCCTGCGAGGGCTGCCGGGCGTGCATCTCCGTGCGCATCTGCGTCGATGACTTCGTG CCCTCGCGCTCCTTCCGCCGCACGCTGAAGGAGAATGAGGATCTCATCGGCGCCTTGCGCCCGCCGAGCCCCACCTCCGA GCAGTATGGCCTCTTCCGCTCCTACGTGACGTCCCGCCACGGCTCCGGCGGCATGGCGGACATGAGCGTGCTCGACTACG CCATGATGGTGGAGGACACCCATGTGCAGACCCGGCTGGTGGAATATCGCCGCCGGGGGCCGGACAGCCGCATCAACGGG CGCGGCACCGGCGACCTGTTCGCCGTCGCCCTCACCGACATCCTCGGCGACGGGCTGTCCATGGTCTATTCCTTCTACAA TCCGAACATTCCCGAGCGTTCGCTCGGCACGTTCCTGATCCTCGACCACATCGCCAAGGCCAAGGAGATGGGCATGCCCT ATGTCTATCTCGGCTATTGGGTGAACGGTTCGCGCAAGATGGACTACAAGCGCCGCTTCCTGCCGCAGGAGCGTCTTTCG CCCCACGGCTGGGAGCGCGTGGACGAATAG
Upstream 100 bases:
>100_bases CGCTGCGGCGCTGGCGATAAATGCATCCTGTCCGGTTCGATAAGTCTTTGACCGACTCGATTCGTGGATGCGATGCTGTG GCATCCGAGGCTTGGGTGCC
Downstream 100 bases:
>100_bases TCGAAGGTCCTTCAAAACCTTAAAGACCAAGGCCGGGGAGCGGCTTGAGCCAGTTCATCAACATCTTCGTGGCGGTCTTC GCCGCCCTCTTTCCCATCGT
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTEHSRDTPQFYLTAPSPCPYLPGKEERKVFTHLVGERAGALNDVLTQGGFRRSQSIAYRPACEGCRACISVRICVDDFV PSRSFRRTLKENEDLIGALRPPSPTSEQYGLFRSYVTSRHGSGGMADMSVLDYAMMVEDTHVQTRLVEYRRRGPDSRING RGTGDLFAVALTDILGDGLSMVYSFYNPNIPERSLGTFLILDHIAKAKEMGMPYVYLGYWVNGSRKMDYKRRFLPQERLS PHGWERVDE
Sequences:
>Translated_249_residues MTEHSRDTPQFYLTAPSPCPYLPGKEERKVFTHLVGERAGALNDVLTQGGFRRSQSIAYRPACEGCRACISVRICVDDFV PSRSFRRTLKENEDLIGALRPPSPTSEQYGLFRSYVTSRHGSGGMADMSVLDYAMMVEDTHVQTRLVEYRRRGPDSRING RGTGDLFAVALTDILGDGLSMVYSFYNPNIPERSLGTFLILDHIAKAKEMGMPYVYLGYWVNGSRKMDYKRRFLPQERLS PHGWERVDE >Mature_248_residues TEHSRDTPQFYLTAPSPCPYLPGKEERKVFTHLVGERAGALNDVLTQGGFRRSQSIAYRPACEGCRACISVRICVDDFVP SRSFRRTLKENEDLIGALRPPSPTSEQYGLFRSYVTSRHGSGGMADMSVLDYAMMVEDTHVQTRLVEYRRRGPDSRINGR GTGDLFAVALTDILGDGLSMVYSFYNPNIPERSLGTFLILDHIAKAKEMGMPYVYLGYWVNGSRKMDYKRRFLPQERLSP HGWERVDE
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_AZOC5 (A8HXU1)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001524456.1 - GeneID: 5689748 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_1540 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: ACAU438753:AZC_1540-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 28260; Mature: 28129
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHSRDTPQFYLTAPSPCPYLPGKEERKVFTHLVGERAGALNDVLTQGGFRRSQSIAYR CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PACEGCRACISVRICVDDFVPSRSFRRTLKENEDLIGALRPPSPTSEQYGLFRSYVTSRH HHHHHHHHHHHHHEEHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCC GSGGMADMSVLDYAMMVEDTHVQTRLVEYRRRGPDSRINGRGTGDLFAVALTDILGDGLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHH MVYSFYNPNIPERSLGTFLILDHIAKAKEMGMPYVYLGYWVNGSRKMDYKRRFLPQERLS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCHHHCC PHGWERVDE CCCCHHCCC >Mature Secondary Structure TEHSRDTPQFYLTAPSPCPYLPGKEERKVFTHLVGERAGALNDVLTQGGFRRSQSIAYR CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PACEGCRACISVRICVDDFVPSRSFRRTLKENEDLIGALRPPSPTSEQYGLFRSYVTSRH HHHHHHHHHHHHHEEHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCC GSGGMADMSVLDYAMMVEDTHVQTRLVEYRRRGPDSRINGRGTGDLFAVALTDILGDGLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHH MVYSFYNPNIPERSLGTFLILDHIAKAKEMGMPYVYLGYWVNGSRKMDYKRRFLPQERLS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCHHHCC PHGWERVDE CCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA