Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423147
Identifier: 158423147
GI number: 158423147
Start: 1733196
End: 1734971
Strand: Reverse
Name: 158423147
Synonym: AZC_1523
Alternate gene names: NA
Gene position: 1734971-1733196 (Counterclockwise)
Preceding gene: 158423150
Following gene: 158423143
Centisome position: 32.31
GC content: 70.66
Gene sequence:
>1776_bases ATGGACACCGTCGCTTCCCTTCTCGCCGCCTATCGGGGCGGCCAACGGACCCCGAGCGACACGGTGCGCGCGACCTATCG ACGGATTGCCGAGCACGCCGACCCTGCCCTCTTCATCACCCTGCGGCCGGAAGCGGACGTGCTGGCGGAAGCCGCCGCGC TGGAGGCGCACCACGATGCCGCCCTGCCGCTCTACGGCATTCCGGTGGCGGTGAAGGACAATATCGACGTCGCCGGCCTG CCCACCACCGCCGCCTGCCCGGCATTCGCCTATGACGTACAGGCCGATGCCGCCGCCGTGGCGCGGCTCAAGGCGGCGGG CGCGCTCATCATCGGCAAGACCAATCTCGATCAGTTCGCCACGGGCCTCGTGGGCGTGCGCTCGCCCTATGGCATCCCGC GCAACGTCTTCAAGCCGGAGCTGGTGCCCGGCGGCTCCTCCTCCGGCTCGGCCAGCGCGGTGGCCGCGGGCATCGTGCCC ATCGCGCTCGGCACCGACACCGCCGGATCTGGCCGCGTGCCGGCCATGCTCCAGAACATCGTCGGATTGAAGCCGAGCCT TGGACTCGTGCCCAGCCTCGGCCTCGTGCCCGCCTGCCGCACGTTGGACTGCATCTCCATCTTCGCGCTGACGGTGGACG ATGCCATGGCCGCGCTGGAGGTGATCGGCGGCTTCGAGCCCACGGACGCCTTCTCCCGCCCGCATACGGTCGGCGCCCTC GGCCCCATGCCGGCCGCCCCCACACTGGGCGTTCTGCCCGCGGCGCAACGCGAATTCTTCGGCGACGCGGATGCCGCCGC GGCTTATGCAGGCGCCCTCGACCGCCTGAAGGCGCTGGGAGCCACGCTGAAGGAGATCGATTTCTCGCCCTTCGCGGAAA CCGCACGCCTGCTCTATGAGGGCCCGTGGGTGGCCGAGCGCTGGCTCGCTGCCGAGACACTCATGACCACCAATCCGGAC GCGGTGCATCCCGTGACCCGCGCCATCACCGAGGGCGGGGCGAAGCCCACGGCGGCGGATGCCTTCCGCGCCCTTTATCG CCTGCAGGAACTGCGCGCCGTCGTGCGCCCCGTGCTGGCCGGTCTCGACGCGCTCGTCGTACCGACCGCTCCCACCGCTT ACACCGTGGACGAGGTGCTGGCCGATCCCATCCGCCTCAACTCGCGACTCGGCACCTACACCAATTTCGTCAACCTGCTG GACCTGTGCGGCACGGCGGTCCCCGCCGCCATCGCGGCCTCCGGCGTGCCCTACGGCATCACCTTCCTCGCCCCGGCGGG ACAGGACGCGGAGGTCGCCTCGCTCGCCCGGGCCTTTGCGGCCGATACCGGCCTGCCCATGGCCGCCAGCGCGGAGAGGC CCGCATATCCCCCGCTCGCCCCGCCCGCCGATCCCGATCGCTACGAGATCTGCGTGTTCGGCGCGCACATGTCCGGCATG CCGCTCAACGCGGAACTGAAATCCTTCGGAGCCCGCTTCGTCACCGAAGTGGAAACAGCGCCTGTCTATCGCATGTCGCT CGTGGAAGGCCCCCGCCCCGGCGTGGTGCGGGTGAACGAGGGGGGCGCGAGCCTCAAGGGCGAGATGTGGTCCCTGCCCT ATGAGGGGGTCGGCCGGCTCGTGGGCGCCATCGTCTCCCCCCTCGGCCTCGGCACCGTGGAACTCGCGGACGGACGCACC GTGACCGGCTTCCTCTGCGAAGCCGCCGCCACGCACGGCTGCCCGGACATCACCGCCTTCGGCAGCTTCCGGTCGTATGT TGCCTCAGTGGAGTGA
Upstream 100 bases:
>100_bases CAAGCCATTGAAAATAAATATAAAAATATGCATCTCCGTGCAATCTGTCACGCTGGCGCGGTTCGTGCTTGGGCGGGGCT AGGTCATTGCAGGAGCCCTC
Downstream 100 bases:
>100_bases GACGGAGAGGGGCAGCATGCCCCCCCCTTTTCACCGCAATGAAGAGAAGGCGTGACCCGCCGCCAGATCGGCGAGGGTGA GCCTGATCCCTTCCGCAAAG
Product: allophanate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDAALPLYGIPVAVKDNIDVAGL PTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFATGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVP IALGTDTAGSGRVPAMLQNIVGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYEGPWVAERWLAAETLMTTNPD AVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLAGLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLL DLCGTAVPAAIAASGVPYGITFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRLVGAIVSPLGLGTVELADGRT VTGFLCEAAATHGCPDITAFGSFRSYVASVE
Sequences:
>Translated_591_residues MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDAALPLYGIPVAVKDNIDVAGL PTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFATGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVP IALGTDTAGSGRVPAMLQNIVGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYEGPWVAERWLAAETLMTTNPD AVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLAGLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLL DLCGTAVPAAIAASGVPYGITFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRLVGAIVSPLGLGTVELADGRT VTGFLCEAAATHGCPDITAFGSFRSYVASVE >Mature_591_residues MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDAALPLYGIPVAVKDNIDVAGL PTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFATGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVP IALGTDTAGSGRVPAMLQNIVGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYEGPWVAERWLAAETLMTTNPD AVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLAGLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLL DLCGTAVPAAIAASGVPYGITFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRLVGAIVSPLGLGTVELADGRT VTGFLCEAAATHGCPDITAFGSFRSYVASVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI222831590, Length=499, Percent_Identity=25.4509018036072, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI195972892, Length=182, Percent_Identity=31.8681318681319, Blast_Score=84, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17543272, Length=452, Percent_Identity=26.9911504424779, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17537465, Length=200, Percent_Identity=30, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17556264, Length=245, Percent_Identity=27.3469387755102, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71990152, Length=234, Percent_Identity=27.3504273504274, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6319685, Length=569, Percent_Identity=41.8277680140597, Blast_Score=397, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6323950, Length=170, Percent_Identity=37.0588235294118, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648113, Length=308, Percent_Identity=34.4155844155844, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24652985, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922090, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652981, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652983, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550774, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI24648435, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI24648437, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI24648441, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24648439, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 60964; Mature: 60964
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDA CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCC ALPLYGIPVAVKDNIDVAGLPTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFA CCCEECCCEEEECCCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHCCEEEEECCCHHHHH TGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVPIALGTDTAGSGRVPAMLQNI HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHH VGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYE CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GPWVAERWLAAETLMTTNPDAVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLA CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLLDLCGTAVPAAIAASGVPYGI CCCEEEECCCCCCEEHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRL CCCHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH VGAIVSPLGLGTVELADGRTVTGFLCEAAATHGCPDITAFGSFRSYVASVE HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDA CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCC ALPLYGIPVAVKDNIDVAGLPTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFA CCCEECCCEEEECCCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHCCEEEEECCCHHHHH TGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVPIALGTDTAGSGRVPAMLQNI HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHH VGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYE CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GPWVAERWLAAETLMTTNPDAVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLA CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLLDLCGTAVPAAIAASGVPYGI CCCEEEECCCCCCEEHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRL CCCHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH VGAIVSPLGLGTVELADGRTVTGFLCEAAATHGCPDITAFGSFRSYVASVE HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9809753 [H]