Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158423147

Identifier: 158423147

GI number: 158423147

Start: 1733196

End: 1734971

Strand: Reverse

Name: 158423147

Synonym: AZC_1523

Alternate gene names: NA

Gene position: 1734971-1733196 (Counterclockwise)

Preceding gene: 158423150

Following gene: 158423143

Centisome position: 32.31

GC content: 70.66

Gene sequence:

>1776_bases
ATGGACACCGTCGCTTCCCTTCTCGCCGCCTATCGGGGCGGCCAACGGACCCCGAGCGACACGGTGCGCGCGACCTATCG
ACGGATTGCCGAGCACGCCGACCCTGCCCTCTTCATCACCCTGCGGCCGGAAGCGGACGTGCTGGCGGAAGCCGCCGCGC
TGGAGGCGCACCACGATGCCGCCCTGCCGCTCTACGGCATTCCGGTGGCGGTGAAGGACAATATCGACGTCGCCGGCCTG
CCCACCACCGCCGCCTGCCCGGCATTCGCCTATGACGTACAGGCCGATGCCGCCGCCGTGGCGCGGCTCAAGGCGGCGGG
CGCGCTCATCATCGGCAAGACCAATCTCGATCAGTTCGCCACGGGCCTCGTGGGCGTGCGCTCGCCCTATGGCATCCCGC
GCAACGTCTTCAAGCCGGAGCTGGTGCCCGGCGGCTCCTCCTCCGGCTCGGCCAGCGCGGTGGCCGCGGGCATCGTGCCC
ATCGCGCTCGGCACCGACACCGCCGGATCTGGCCGCGTGCCGGCCATGCTCCAGAACATCGTCGGATTGAAGCCGAGCCT
TGGACTCGTGCCCAGCCTCGGCCTCGTGCCCGCCTGCCGCACGTTGGACTGCATCTCCATCTTCGCGCTGACGGTGGACG
ATGCCATGGCCGCGCTGGAGGTGATCGGCGGCTTCGAGCCCACGGACGCCTTCTCCCGCCCGCATACGGTCGGCGCCCTC
GGCCCCATGCCGGCCGCCCCCACACTGGGCGTTCTGCCCGCGGCGCAACGCGAATTCTTCGGCGACGCGGATGCCGCCGC
GGCTTATGCAGGCGCCCTCGACCGCCTGAAGGCGCTGGGAGCCACGCTGAAGGAGATCGATTTCTCGCCCTTCGCGGAAA
CCGCACGCCTGCTCTATGAGGGCCCGTGGGTGGCCGAGCGCTGGCTCGCTGCCGAGACACTCATGACCACCAATCCGGAC
GCGGTGCATCCCGTGACCCGCGCCATCACCGAGGGCGGGGCGAAGCCCACGGCGGCGGATGCCTTCCGCGCCCTTTATCG
CCTGCAGGAACTGCGCGCCGTCGTGCGCCCCGTGCTGGCCGGTCTCGACGCGCTCGTCGTACCGACCGCTCCCACCGCTT
ACACCGTGGACGAGGTGCTGGCCGATCCCATCCGCCTCAACTCGCGACTCGGCACCTACACCAATTTCGTCAACCTGCTG
GACCTGTGCGGCACGGCGGTCCCCGCCGCCATCGCGGCCTCCGGCGTGCCCTACGGCATCACCTTCCTCGCCCCGGCGGG
ACAGGACGCGGAGGTCGCCTCGCTCGCCCGGGCCTTTGCGGCCGATACCGGCCTGCCCATGGCCGCCAGCGCGGAGAGGC
CCGCATATCCCCCGCTCGCCCCGCCCGCCGATCCCGATCGCTACGAGATCTGCGTGTTCGGCGCGCACATGTCCGGCATG
CCGCTCAACGCGGAACTGAAATCCTTCGGAGCCCGCTTCGTCACCGAAGTGGAAACAGCGCCTGTCTATCGCATGTCGCT
CGTGGAAGGCCCCCGCCCCGGCGTGGTGCGGGTGAACGAGGGGGGCGCGAGCCTCAAGGGCGAGATGTGGTCCCTGCCCT
ATGAGGGGGTCGGCCGGCTCGTGGGCGCCATCGTCTCCCCCCTCGGCCTCGGCACCGTGGAACTCGCGGACGGACGCACC
GTGACCGGCTTCCTCTGCGAAGCCGCCGCCACGCACGGCTGCCCGGACATCACCGCCTTCGGCAGCTTCCGGTCGTATGT
TGCCTCAGTGGAGTGA

Upstream 100 bases:

>100_bases
CAAGCCATTGAAAATAAATATAAAAATATGCATCTCCGTGCAATCTGTCACGCTGGCGCGGTTCGTGCTTGGGCGGGGCT
AGGTCATTGCAGGAGCCCTC

Downstream 100 bases:

>100_bases
GACGGAGAGGGGCAGCATGCCCCCCCCTTTTCACCGCAATGAAGAGAAGGCGTGACCCGCCGCCAGATCGGCGAGGGTGA
GCCTGATCCCTTCCGCAAAG

Product: allophanate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDAALPLYGIPVAVKDNIDVAGL
PTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFATGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVP
IALGTDTAGSGRVPAMLQNIVGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL
GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYEGPWVAERWLAAETLMTTNPD
AVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLAGLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLL
DLCGTAVPAAIAASGVPYGITFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM
PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRLVGAIVSPLGLGTVELADGRT
VTGFLCEAAATHGCPDITAFGSFRSYVASVE

Sequences:

>Translated_591_residues
MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDAALPLYGIPVAVKDNIDVAGL
PTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFATGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVP
IALGTDTAGSGRVPAMLQNIVGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL
GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYEGPWVAERWLAAETLMTTNPD
AVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLAGLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLL
DLCGTAVPAAIAASGVPYGITFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM
PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRLVGAIVSPLGLGTVELADGRT
VTGFLCEAAATHGCPDITAFGSFRSYVASVE
>Mature_591_residues
MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDAALPLYGIPVAVKDNIDVAGL
PTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFATGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVP
IALGTDTAGSGRVPAMLQNIVGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL
GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYEGPWVAERWLAAETLMTTNPD
AVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLAGLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLL
DLCGTAVPAAIAASGVPYGITFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM
PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRLVGAIVSPLGLGTVELADGRT
VTGFLCEAAATHGCPDITAFGSFRSYVASVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI222831590, Length=499, Percent_Identity=25.4509018036072, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI195972892, Length=182, Percent_Identity=31.8681318681319, Blast_Score=84, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17543272, Length=452, Percent_Identity=26.9911504424779, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17537465, Length=200, Percent_Identity=30, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17556264, Length=245, Percent_Identity=27.3469387755102, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71990152, Length=234, Percent_Identity=27.3504273504274, Blast_Score=69, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6319685, Length=569, Percent_Identity=41.8277680140597, Blast_Score=397, Evalue=1e-111,
Organism=Saccharomyces cerevisiae, GI6323950, Length=170, Percent_Identity=37.0588235294118, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648113, Length=308, Percent_Identity=34.4155844155844, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24652985, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19922090, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24652981, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24652983, Length=488, Percent_Identity=24.7950819672131, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45550774, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24648435, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24648437, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24648441, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648439, Length=128, Percent_Identity=34.375, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: =3.5.1.4 [H]

Molecular weight: Translated: 60964; Mature: 60964

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDA
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCC
ALPLYGIPVAVKDNIDVAGLPTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFA
CCCEECCCEEEECCCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHCCEEEEECCCHHHHH
TGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVPIALGTDTAGSGRVPAMLQNI
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHH
VGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC
GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYE
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GPWVAERWLAAETLMTTNPDAVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLLDLCGTAVPAAIAASGVPYGI
CCCEEEECCCCCCEEHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRL
CCCHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
VGAIVSPLGLGTVELADGRTVTGFLCEAAATHGCPDITAFGSFRSYVASVE
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTVASLLAAYRGGQRTPSDTVRATYRRIAEHADPALFITLRPEADVLAEAAALEAHHDA
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCC
ALPLYGIPVAVKDNIDVAGLPTTAACPAFAYDVQADAAAVARLKAAGALIIGKTNLDQFA
CCCEECCCEEEECCCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHCCEEEEECCCHHHHH
TGLVGVRSPYGIPRNVFKPELVPGGSSSGSASAVAAGIVPIALGTDTAGSGRVPAMLQNI
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHH
VGLKPSLGLVPSLGLVPACRTLDCISIFALTVDDAMAALEVIGGFEPTDAFSRPHTVGAL
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC
GPMPAAPTLGVLPAAQREFFGDADAAAAYAGALDRLKALGATLKEIDFSPFAETARLLYE
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GPWVAERWLAAETLMTTNPDAVHPVTRAITEGGAKPTAADAFRALYRLQELRAVVRPVLA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLDALVVPTAPTAYTVDEVLADPIRLNSRLGTYTNFVNLLDLCGTAVPAAIAASGVPYGI
CCCEEEECCCCCCEEHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TFLAPAGQDAEVASLARAFAADTGLPMAASAERPAYPPLAPPADPDRYEICVFGAHMSGM
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
PLNAELKSFGARFVTEVETAPVYRMSLVEGPRPGVVRVNEGGASLKGEMWSLPYEGVGRL
CCCHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
VGAIVSPLGLGTVELADGRTVTGFLCEAAATHGCPDITAFGSFRSYVASVE
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9809753 [H]