| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is zraS [C]
Identifier: 158423045
GI number: 158423045
Start: 1616332
End: 1618869
Strand: Reverse
Name: zraS [C]
Synonym: AZC_1421
Alternate gene names: 158423045
Gene position: 1618869-1616332 (Counterclockwise)
Preceding gene: 158423047
Following gene: 158423033
Centisome position: 30.15
GC content: 66.27
Gene sequence:
>2538_bases TTGACCGGCTCTGCGTTGTTCATCCTTGAGCCTGGCAGCAATGCCGAACAGTCGTTCATCTTGGGGGGCCGCGTGGGAAG ATCGACGCCAGATCTGGACGATATTTTCCCCGGTGACAGCGCCATGGCCAAGCTCATGCGCCAGCATGACTGGTCCGCGA CGCCGCTCGGCTGCCCGAGCACGTGGCCGGACGGGCTGACCATCCCTCTGCGCATGCTGCTCACCTCGCGCTTCGAGATG TGGCTCGGCTGGGGCGAGGATCTGCGTTTCTTCTACAACGATGCCTACATCCCGACGCTCGGCATCAAGCACCCCAGCAT GCTGGGGCGGCCGTTCCGCGAGGTGTGGGCCGAGGTCTATGACGACGTGGCCGATCAGGTGGCCAAGGTCCGCGCCGGTG AGGCCACCTGGAACGACAGCCTGATGCTCATCCTGGAGCGCAGCGGCTATCCAGAGGAGACCTACCACAGCTTCTCCTAC AGCCCGCTCTATGGAGCAGAACGGGCGGTAGAGGGCCTGCTATGCATCGTGACCGAGGTCACGCGGCCAGTCATCAGCGA CCGCCGGCTCAGCACGTTGCGGCAGCTCGGTACGGCATTGGTAGGTGTGACCTCGCGGGACGAAGTGAGCCTTGCGGTCT GTGCCGTGCTCGGCGCCAACCGGCGGGACTTTCCCTTCGCCCTTCTGTTCCTCGGCGACGGGAGCACACGGCAGGCCGTC GCCTGCTCTGCGGATGCGGCCCATCTGCTGAACGGGCCATGGCCGGATGATCCGCCAGCGAACGGCATCAGCTTCGCCCT GCCGCCAGACGTGGATTATCCCGCCGGCGACTGGCCCGCGCGGCCGCGCGAGGCCCTGTCCGTGCCCATTCCCGGCGCCG CCGGCCGGCCCGCCGCCGGCTTTCTCATCCTCGGCCTCAATCCCTTTCGCCAGCGCGGCGAAAATGTCGCCGATCTCGCC AATCTCCTCGCCGGCCAGATCAGCGGCGCCCTCGCCAATGTGGCGACGCTGGCCACCGAGCGCCGCCGGGCCGATCGCAT CTGGACCAACTCCCGCGATCTTCTGGTGACGGTGGACGCAGCGGGCGTCTTCCAGTCCGTCAGCCCGTCCTGGACCCGCA TCCTCAAGCACCCCATCGAAGCCGTGGTCGGCCGGAGCTTTTCCGATTTCATCCACCCCGACGATCTGGAGCCGGCGCAT CAGGCGCTCCGCAAGGCCATGTCGGGCTCCTATCTGACGGGCCTCGAGAACCGCTTCCAGACGGCGGACGGCGAGGTGCG CCACATCTCGTGGAACACTGCCATGGAGGATGGCCTCGTCTATGGCTATGGGCGTGACGTCACCGAGGAGAAGGCCAAGG CCGCCGCACTCGCCAATGCGGAGGAAGCGTTGCGCCATGCCCAGAAGATGGAGGCAGTAGGACAGCTCACCGGCGGCATC GCGCATGATTTCAACAATCTGCTGACTGGCATCATCGGCTCGCTGGATCTGGTGCGCCGGAGGATCAAGCCCGACTGGCC GTCGGATGTGGACCGCTTCCTGACCGTCGCCACGAGTTCGGCGGAGCGTGCGGCCTCGCTCACACAGCGCCTGCTCGCCT TCGCCCGCCGGCAGTCGCTCGATCCGCAGCCGGTACAGGCGCACCAGCTGGTGGTGGGCATGCTGGACCTCATCAAGAAG TCCATCGGCGAACTGATCGTGCTGCGCATCGAGACCGAGGAGGATCTCTGGAACGCCCGCTGCGATCCCAACCAGTTGGA GAGTTCGGTCCTCAATCTCGCGATCAACTCGCGGGATGCCATGCCGGACGGCGGAACGCTCACCATCCGGACGGAAAATG TCCGGGTCGAGCCCGCCGATCTCGGGCGCGTGGCGCTCCCGGCGCCGGGGGACTATGTGCTGCTCCAGGTCGAGGACACG GGGCACGGCATGCCGGCCCATGTCATCTCGAAGGCCTTCGAGCCCTTCTTCACCACCAAGCCGCTCGGCAAGGGCACGGG CCTCGGCCTCTCCATGATCTACGGCTTTGCCCAGCAGTCCGGCGGTACCGTCCTTATCGAGAGCGTGGAGCAGCAAGGCA CGGTGGTCTCGCTGTATATCCCCCGCTCGCGGGAAGATGCCCGGCCCATCGTGCCCGCCGGGGGCGATGCCGATCGCGCG GAAGCGATCAAGCACGCGGCGACCATCCTGATCGTCGAGGACGAGCCTGCGGTCCGGCTGCTGGTCACGGAATCACTTGG CGCGCTCGGCTATGAGACGCTGGTGGCCTCTACCGGGCCCGATGGCCTCAGGATCCTCCAGTCCGACCAGCCCATCGACC TGCTGCTGACGGACGTGGGATTGCCCGGCCTCAACGGACGCCAGCTTGCGGACGCCGCCCGCGTCACCCGCCCCAATCTG AAAGTCCTGTTCGTGACCGGATATGTGCACGATTCCGGCCTGTACGAGGATGGTCTGGAACCGGGCATGGCGGTCGTCAC CAAGCCGTTCGACATCGATAAGCTTGCCAAACGGGTCGCGGAGCTCATCGGGCAATGA
Upstream 100 bases:
>100_bases CGGCCCCGCGCATCTGTGTTCTGCGGTCCACATCCTGCGCCTCCGAAAGGCATCGACCGGACGCTTCGGCACTTCTAAGA TCGCGCGATAACAGAACCTC
Downstream 100 bases:
>100_bases GGCTCCGCATCCGCGTTTGAGCGACGGCCTCAGCCCTGACGGCGGATGAAGCCGGTGATGGTGACGCGAGCCCAGATGCC CGCCTTCTTGAACGGGTCGG
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 845; Mature: 844
Protein sequence:
>845_residues MTGSALFILEPGSNAEQSFILGGRVGRSTPDLDDIFPGDSAMAKLMRQHDWSATPLGCPSTWPDGLTIPLRMLLTSRFEM WLGWGEDLRFFYNDAYIPTLGIKHPSMLGRPFREVWAEVYDDVADQVAKVRAGEATWNDSLMLILERSGYPEETYHSFSY SPLYGAERAVEGLLCIVTEVTRPVISDRRLSTLRQLGTALVGVTSRDEVSLAVCAVLGANRRDFPFALLFLGDGSTRQAV ACSADAAHLLNGPWPDDPPANGISFALPPDVDYPAGDWPARPREALSVPIPGAAGRPAAGFLILGLNPFRQRGENVADLA NLLAGQISGALANVATLATERRRADRIWTNSRDLLVTVDAAGVFQSVSPSWTRILKHPIEAVVGRSFSDFIHPDDLEPAH QALRKAMSGSYLTGLENRFQTADGEVRHISWNTAMEDGLVYGYGRDVTEEKAKAAALANAEEALRHAQKMEAVGQLTGGI AHDFNNLLTGIIGSLDLVRRRIKPDWPSDVDRFLTVATSSAERAASLTQRLLAFARRQSLDPQPVQAHQLVVGMLDLIKK SIGELIVLRIETEEDLWNARCDPNQLESSVLNLAINSRDAMPDGGTLTIRTENVRVEPADLGRVALPAPGDYVLLQVEDT GHGMPAHVISKAFEPFFTTKPLGKGTGLGLSMIYGFAQQSGGTVLIESVEQQGTVVSLYIPRSREDARPIVPAGGDADRA EAIKHAATILIVEDEPAVRLLVTESLGALGYETLVASTGPDGLRILQSDQPIDLLLTDVGLPGLNGRQLADAARVTRPNL KVLFVTGYVHDSGLYEDGLEPGMAVVTKPFDIDKLAKRVAELIGQ
Sequences:
>Translated_845_residues MTGSALFILEPGSNAEQSFILGGRVGRSTPDLDDIFPGDSAMAKLMRQHDWSATPLGCPSTWPDGLTIPLRMLLTSRFEM WLGWGEDLRFFYNDAYIPTLGIKHPSMLGRPFREVWAEVYDDVADQVAKVRAGEATWNDSLMLILERSGYPEETYHSFSY SPLYGAERAVEGLLCIVTEVTRPVISDRRLSTLRQLGTALVGVTSRDEVSLAVCAVLGANRRDFPFALLFLGDGSTRQAV ACSADAAHLLNGPWPDDPPANGISFALPPDVDYPAGDWPARPREALSVPIPGAAGRPAAGFLILGLNPFRQRGENVADLA NLLAGQISGALANVATLATERRRADRIWTNSRDLLVTVDAAGVFQSVSPSWTRILKHPIEAVVGRSFSDFIHPDDLEPAH QALRKAMSGSYLTGLENRFQTADGEVRHISWNTAMEDGLVYGYGRDVTEEKAKAAALANAEEALRHAQKMEAVGQLTGGI AHDFNNLLTGIIGSLDLVRRRIKPDWPSDVDRFLTVATSSAERAASLTQRLLAFARRQSLDPQPVQAHQLVVGMLDLIKK SIGELIVLRIETEEDLWNARCDPNQLESSVLNLAINSRDAMPDGGTLTIRTENVRVEPADLGRVALPAPGDYVLLQVEDT GHGMPAHVISKAFEPFFTTKPLGKGTGLGLSMIYGFAQQSGGTVLIESVEQQGTVVSLYIPRSREDARPIVPAGGDADRA EAIKHAATILIVEDEPAVRLLVTESLGALGYETLVASTGPDGLRILQSDQPIDLLLTDVGLPGLNGRQLADAARVTRPNL KVLFVTGYVHDSGLYEDGLEPGMAVVTKPFDIDKLAKRVAELIGQ >Mature_844_residues TGSALFILEPGSNAEQSFILGGRVGRSTPDLDDIFPGDSAMAKLMRQHDWSATPLGCPSTWPDGLTIPLRMLLTSRFEMW LGWGEDLRFFYNDAYIPTLGIKHPSMLGRPFREVWAEVYDDVADQVAKVRAGEATWNDSLMLILERSGYPEETYHSFSYS PLYGAERAVEGLLCIVTEVTRPVISDRRLSTLRQLGTALVGVTSRDEVSLAVCAVLGANRRDFPFALLFLGDGSTRQAVA CSADAAHLLNGPWPDDPPANGISFALPPDVDYPAGDWPARPREALSVPIPGAAGRPAAGFLILGLNPFRQRGENVADLAN LLAGQISGALANVATLATERRRADRIWTNSRDLLVTVDAAGVFQSVSPSWTRILKHPIEAVVGRSFSDFIHPDDLEPAHQ ALRKAMSGSYLTGLENRFQTADGEVRHISWNTAMEDGLVYGYGRDVTEEKAKAAALANAEEALRHAQKMEAVGQLTGGIA HDFNNLLTGIIGSLDLVRRRIKPDWPSDVDRFLTVATSSAERAASLTQRLLAFARRQSLDPQPVQAHQLVVGMLDLIKKS IGELIVLRIETEEDLWNARCDPNQLESSVLNLAINSRDAMPDGGTLTIRTENVRVEPADLGRVALPAPGDYVLLQVEDTG HGMPAHVISKAFEPFFTTKPLGKGTGLGLSMIYGFAQQSGGTVLIESVEQQGTVVSLYIPRSREDARPIVPAGGDADRAE AIKHAATILIVEDEPAVRLLVTESLGALGYETLVASTGPDGLRILQSDQPIDLLLTDVGLPGLNGRQLADAARVTRPNLK VLFVTGYVHDSGLYEDGLEPGMAVVTKPFDIDKLAKRVAELIGQ
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=242, Percent_Identity=26.4462809917355, Blast_Score=93, Evalue=8e-20, Organism=Escherichia coli, GI1788549, Length=393, Percent_Identity=26.2086513994911, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI87081816, Length=381, Percent_Identity=22.5721784776903, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI145693157, Length=297, Percent_Identity=25.2525252525253, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790300, Length=243, Percent_Identity=28.8065843621399, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI48994928, Length=501, Percent_Identity=24.1516966067864, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790861, Length=253, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91542; Mature: 91411
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSALFILEPGSNAEQSFILGGRVGRSTPDLDDIFPGDSAMAKLMRQHDWSATPLGCPS CCCCEEEEECCCCCCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCC TWPDGLTIPLRMLLTSRFEMWLGWGEDLRFFYNDAYIPTLGIKHPSMLGRPFREVWAEVY CCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCEECCCCHHHHCCHHHHHHHHHH DDVADQVAKVRAGEATWNDSLMLILERSGYPEETYHSFSYSPLYGAERAVEGLLCIVTEV HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH TRPVISDRRLSTLRQLGTALVGVTSRDEVSLAVCAVLGANRRDFPFALLFLGDGSTRQAV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEE ACSADAAHLLNGPWPDDPPANGISFALPPDVDYPAGDWPARPREALSVPIPGAAGRPAAG EECCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCC FLILGLNPFRQRGENVADLANLLAGQISGALANVATLATERRRADRIWTNSRDLLVTVDA EEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC AGVFQSVSPSWTRILKHPIEAVVGRSFSDFIHPDDLEPAHQALRKAMSGSYLTGLENRFQ CHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHC TADGEVRHISWNTAMEDGLVYGYGRDVTEEKAKAAALANAEEALRHAQKMEAVGQLTGGI CCCCCEEEEEECCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHH AHDFNNLLTGIIGSLDLVRRRIKPDWPSDVDRFLTVATSSAERAASLTQRLLAFARRQSL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC DPQPVQAHQLVVGMLDLIKKSIGELIVLRIETEEDLWNARCDPNQLESSVLNLAINSRDA CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHEECCCCC MPDGGTLTIRTENVRVEPADLGRVALPAPGDYVLLQVEDTGHGMPAHVISKAFEPFFTTK CCCCCEEEEEECCEEECHHCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCC PLGKGTGLGLSMIYGFAQQSGGTVLIESVEQQGTVVSLYIPRSREDARPIVPAGGDADRA CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH EAIKHAATILIVEDEPAVRLLVTESLGALGYETLVASTGPDGLRILQSDQPIDLLLTDVG HHHHHHEEEEEECCCCCEEEEEEHHCCCCCHHHHEECCCCCCEEEECCCCCCEEEEEECC LPGLNGRQLADAARVTRPNLKVLFVTGYVHDSGLYEDGLEPGMAVVTKPFDIDKLAKRVA CCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHH ELIGQ HHHCC >Mature Secondary Structure TGSALFILEPGSNAEQSFILGGRVGRSTPDLDDIFPGDSAMAKLMRQHDWSATPLGCPS CCCEEEEECCCCCCCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCC TWPDGLTIPLRMLLTSRFEMWLGWGEDLRFFYNDAYIPTLGIKHPSMLGRPFREVWAEVY CCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCEECCCCHHHHCCHHHHHHHHHH DDVADQVAKVRAGEATWNDSLMLILERSGYPEETYHSFSYSPLYGAERAVEGLLCIVTEV HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH TRPVISDRRLSTLRQLGTALVGVTSRDEVSLAVCAVLGANRRDFPFALLFLGDGSTRQAV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEE ACSADAAHLLNGPWPDDPPANGISFALPPDVDYPAGDWPARPREALSVPIPGAAGRPAAG EECCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCC FLILGLNPFRQRGENVADLANLLAGQISGALANVATLATERRRADRIWTNSRDLLVTVDA EEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC AGVFQSVSPSWTRILKHPIEAVVGRSFSDFIHPDDLEPAHQALRKAMSGSYLTGLENRFQ CHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHC TADGEVRHISWNTAMEDGLVYGYGRDVTEEKAKAAALANAEEALRHAQKMEAVGQLTGGI CCCCCEEEEEECCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHH AHDFNNLLTGIIGSLDLVRRRIKPDWPSDVDRFLTVATSSAERAASLTQRLLAFARRQSL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC DPQPVQAHQLVVGMLDLIKKSIGELIVLRIETEEDLWNARCDPNQLESSVLNLAINSRDA CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHEECCCCC MPDGGTLTIRTENVRVEPADLGRVALPAPGDYVLLQVEDTGHGMPAHVISKAFEPFFTTK CCCCCEEEEEECCEEECHHCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCC PLGKGTGLGLSMIYGFAQQSGGTVLIESVEQQGTVVSLYIPRSREDARPIVPAGGDADRA CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH EAIKHAATILIVEDEPAVRLLVTESLGALGYETLVASTGPDGLRILQSDQPIDLLLTDVG HHHHHHEEEEEECCCCCEEEEEEHHCCCCCHHHHEECCCCCCEEEECCCCCCEEEEEECC LPGLNGRQLADAARVTRPNLKVLFVTGYVHDSGLYEDGLEPGMAVVTKPFDIDKLAKRVA CCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHH ELIGQ HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA