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The map label for this gene is yagT [H]

Identifier: 158423026

GI number: 158423026

Start: 1594087

End: 1594752

Strand: Reverse

Name: yagT [H]

Synonym: AZC_1402

Alternate gene names: 158423026

Gene position: 1594752-1594087 (Counterclockwise)

Preceding gene: 158423031

Following gene: 158423025

Centisome position: 29.7

GC content: 67.27

Gene sequence:

>666_bases
ATGACCATGCCCCAGCCCACGGCCCTGACGCGACGCGACCTGATCGCCGCCGGAGCCGCCACCCTCGCCGGGAGCGGCGT
TGCCCATCCCGCCGCTGCCGAGACGTCCCAGCCAGTATCTACCCCGCCCAACGCGCCCCGCACCCTCGATCCCGTTTCGG
CGAAGGTCCGCTTCACCGTGAACGGCGCCTCCCACGAATTGACGGTCGACACGCGCACCACCCTGCTCGATGCGCTGCGC
GAGCATCTGCATCTGACAGGCACCAAGAAGGGCTGCGATCACGGACAGTGCGGGGCCTGCACCGTGATGGTCGACGGCGT
GCGCATCAACTCCTGCCTGACGCTTGCGGTGATGCACGAGGGCGACAGCGTGACCACCATTGAGGGCCTCGGCAGCCCCG
GCAATCTGCATCCCATGCAGGCGGCCTTCATCAAGCATGACGGTTATCAGTGCGGCTACTGCACGCCGGGCCAGATCTGC
TCGGCCGTGGCGGTGCTGGGCGAGATCCGCGACGGCATCCCGAGCCATGTCACGGCCGATCTTTCCACCGCGCCCGAGCT
CTCCGTGGACGAGGTGCGCGAGCGCATGAGCGGCAACATCTGCCGTTGCGGCGCCTATTCCAACATCCTCGAAGCCATCA
CAGAAGTTGCCGGGAGAGGCGCATGA

Upstream 100 bases:

>100_bases
CATCCTGTCTGGAGGCATTCCATGATGGAGGTCCGCGCGCCTGTTGCGTCGGCGACCCTGAGCCCTTCCCCCGGCCCGCC
TCCAACCTTCGGATCCGGAC

Downstream 100 bases:

>100_bases
TCCCCTTCACGTTCGAGCGCGCCTCGTCCCCCGCCGAAGCGGCGGCCGCAGCCGCGCGCACGCCCGGCGCCAAGTTCATC
GCGGGCGGCACCAATCTCCT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTMPQPTALTRRDLIAAGAATLAGSGVAHPAAAETSQPVSTPPNAPRTLDPVSAKVRFTVNGASHELTVDTRTTLLDALR
EHLHLTGTKKGCDHGQCGACTVMVDGVRINSCLTLAVMHEGDSVTTIEGLGSPGNLHPMQAAFIKHDGYQCGYCTPGQIC
SAVAVLGEIRDGIPSHVTADLSTAPELSVDEVRERMSGNICRCGAYSNILEAITEVAGRGA

Sequences:

>Translated_221_residues
MTMPQPTALTRRDLIAAGAATLAGSGVAHPAAAETSQPVSTPPNAPRTLDPVSAKVRFTVNGASHELTVDTRTTLLDALR
EHLHLTGTKKGCDHGQCGACTVMVDGVRINSCLTLAVMHEGDSVTTIEGLGSPGNLHPMQAAFIKHDGYQCGYCTPGQIC
SAVAVLGEIRDGIPSHVTADLSTAPELSVDEVRERMSGNICRCGAYSNILEAITEVAGRGA
>Mature_220_residues
TMPQPTALTRRDLIAAGAATLAGSGVAHPAAAETSQPVSTPPNAPRTLDPVSAKVRFTVNGASHELTVDTRTTLLDALRE
HLHLTGTKKGCDHGQCGACTVMVDGVRINSCLTLAVMHEGDSVTTIEGLGSPGNLHPMQAAFIKHDGYQCGYCTPGQICS
AVAVLGEIRDGIPSHVTADLSTAPELSVDEVRERMSGNICRCGAYSNILEAITEVAGRGA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=175, Percent_Identity=37.1428571428571, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI71773480, Length=172, Percent_Identity=38.3720930232558, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1786480, Length=216, Percent_Identity=67.1296296296296, Blast_Score=281, Evalue=3e-77,
Organism=Escherichia coli, GI1789232, Length=160, Percent_Identity=37.5, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17540638, Length=171, Percent_Identity=38.0116959064327, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17539860, Length=167, Percent_Identity=34.1317365269461, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32566215, Length=167, Percent_Identity=34.1317365269461, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI17737937, Length=166, Percent_Identity=40.9638554216867, Blast_Score=103, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24647195, Length=176, Percent_Identity=34.6590909090909, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24647197, Length=176, Percent_Identity=34.6590909090909, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24647193, Length=175, Percent_Identity=34.8571428571429, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24647199, Length=169, Percent_Identity=34.3195266272189, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24647201, Length=168, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 22941; Mature: 22810

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPQPTALTRRDLIAAGAATLAGSGVAHPAAAETSQPVSTPPNAPRTLDPVSAKVRFTV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
NGASHELTVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVMVDGVRINSCLTLAVMHE
CCCCEEEEECHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCEEECCEEEEEEEEC
GDSVTTIEGLGSPGNLHPMQAAFIKHDGYQCGYCTPGQICSAVAVLGEIRDGIPSHVTAD
CCCEEEEECCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC
LSTAPELSVDEVRERMSGNICRCGAYSNILEAITEVAGRGA
CCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TMPQPTALTRRDLIAAGAATLAGSGVAHPAAAETSQPVSTPPNAPRTLDPVSAKVRFTV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
NGASHELTVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVMVDGVRINSCLTLAVMHE
CCCCEEEEECHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCEEECCEEEEEEEEC
GDSVTTIEGLGSPGNLHPMQAAFIKHDGYQCGYCTPGQICSAVAVLGEIRDGIPSHVTAD
CCCEEEEECCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC
LSTAPELSVDEVRERMSGNICRCGAYSNILEAITEVAGRGA
CCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]