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The map label for this gene is glxA [H]

Identifier: 158423012

GI number: 158423012

Start: 1570336

End: 1571346

Strand: Reverse

Name: glxA [H]

Synonym: AZC_1388

Alternate gene names: 158423012

Gene position: 1571346-1570336 (Counterclockwise)

Preceding gene: 158423015

Following gene: 158423011

Centisome position: 29.26

GC content: 66.17

Gene sequence:

>1011_bases
ATGAGATCCGTTGCCTTCATCATGGAGGATGGCTTCCAGGTCATGGGCCTGGCAGCGATATCGGCGTTCGAGTTTGCAAA
CCTGCAACTGGGCGAACAGGCCTATTCCATCTCCATCATGTCGGAAAAGGGCGGCAGCATCCTCTCGACGCTGGGCATGA
AAGTCGAGACCGCCTCCCTCGGCAGCTTTCCCGATACGCTGATGGTGCTGGGTGAATTGAGGCCGAAGCCGATTTCACCC
GTCCTGCGGGACTACATTGCGGCGGCGGGACAGAATTCGCGACGGGTTGCCGGCGTTTGCACCGGAGCCTTCATCCTTGC
CGAAGCGGGCCTGCTCGACGGCCGATCCGCCACCACCCACTGGGCCCATTCACGTGCCCTGCAGAGCCGGTTTCCGACTG
TGCGTGTGGATGACGACCGCATTTTCATCCAGGACGGCCACATCTGGACCTCGGCCGGCATGAGCTCGGCCATCGATCTT
GCCCTCGCGCTGATCGAGGACGACTATGACGCCACCCTGGCGCGGAACATCGCCCGCCGGCTCGTGGTGTATCACCGCCG
ACCCGGCGGCCAGTCCCAATTCTCGGCCATGCTCGAACTGGAGCCGCGGTCGGACCGCGTGAAGCGTGCCCTCATCTATG
CCAAGGAGAACCTGCGCAACCCGCTGACCGTGGAAGAACTCGCCCAGGCCGCGAGCCTGAGCCCGCGGCAGTTCACCCGC
GTCTTCCGGGAGGAAACCGGGCAGTCTCCCGCCAAGGCCGTGGAGCGGCTGCGTCTCGAGGCCGCGAAGGTGATGCTGGA
GGAAGGCCGCCATCCCATGGATATCGTGGCCCGCGACACCGGTTTTGCCGACCGCGACCGGATGCGGCGCGCCTTCCTGC
GCTTCTTCGGCCATCCGCCGCAGACCATGCGCCGCGTGCAGCGTCTCGGCGAGGCGGACGACGCGACCGGCGACGACGGC
CTCGCGGCCGACATGCCGGGAGCCCCGCTCGTGCCCGAGCGCACGACCTGA

Upstream 100 bases:

>100_bases
TTTGCGGTTTCGGCGCAATTCATGTTCCGACAAGCCTGAACTGGACAATGGCCGGGTGAAAACCATATAAGAGGCAAAAA
GCATTGGCTGGACGAGTGAG

Downstream 100 bases:

>100_bases
AGCCAGCGCGATCCACGCGCGGGATGGCCTGAATTGCTGCCTTCTTGACATAGGAGACAGGAAGACGCGCGCCTAGCCTG
CCACCGTCGACTGCGGTCGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRSVAFIMEDGFQVMGLAAISAFEFANLQLGEQAYSISIMSEKGGSILSTLGMKVETASLGSFPDTLMVLGELRPKPISP
VLRDYIAAAGQNSRRVAGVCTGAFILAEAGLLDGRSATTHWAHSRALQSRFPTVRVDDDRIFIQDGHIWTSAGMSSAIDL
ALALIEDDYDATLARNIARRLVVYHRRPGGQSQFSAMLELEPRSDRVKRALIYAKENLRNPLTVEELAQAASLSPRQFTR
VFREETGQSPAKAVERLRLEAAKVMLEEGRHPMDIVARDTGFADRDRMRRAFLRFFGHPPQTMRRVQRLGEADDATGDDG
LAADMPGAPLVPERTT

Sequences:

>Translated_336_residues
MRSVAFIMEDGFQVMGLAAISAFEFANLQLGEQAYSISIMSEKGGSILSTLGMKVETASLGSFPDTLMVLGELRPKPISP
VLRDYIAAAGQNSRRVAGVCTGAFILAEAGLLDGRSATTHWAHSRALQSRFPTVRVDDDRIFIQDGHIWTSAGMSSAIDL
ALALIEDDYDATLARNIARRLVVYHRRPGGQSQFSAMLELEPRSDRVKRALIYAKENLRNPLTVEELAQAASLSPRQFTR
VFREETGQSPAKAVERLRLEAAKVMLEEGRHPMDIVARDTGFADRDRMRRAFLRFFGHPPQTMRRVQRLGEADDATGDDG
LAADMPGAPLVPERTT
>Mature_336_residues
MRSVAFIMEDGFQVMGLAAISAFEFANLQLGEQAYSISIMSEKGGSILSTLGMKVETASLGSFPDTLMVLGELRPKPISP
VLRDYIAAAGQNSRRVAGVCTGAFILAEAGLLDGRSATTHWAHSRALQSRFPTVRVDDDRIFIQDGHIWTSAGMSSAIDL
ALALIEDDYDATLARNIARRLVVYHRRPGGQSQFSAMLELEPRSDRVKRALIYAKENLRNPLTVEELAQAASLSPRQFTR
VFREETGQSPAKAVERLRLEAAKVMLEEGRHPMDIVARDTGFADRDRMRRAFLRFFGHPPQTMRRVQRLGEADDATGDDG
LAADMPGAPLVPERTT

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37005; Mature: 37005

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVAFIMEDGFQVMGLAAISAFEFANLQLGEQAYSISIMSEKGGSILSTLGMKVETASL
CCCEEEEHHCCCHHHHHHHHHHHHHHCCEECCCEEEEEEECCCCCHHHHHHCCEEEECCC
GSFPDTLMVLGELRPKPISPVLRDYIAAAGQNSRRVAGVCTGAFILAEAGLLDGRSATTH
CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHH
WAHSRALQSRFPTVRVDDDRIFIQDGHIWTSAGMSSAIDLALALIEDDYDATLARNIARR
HHHHHHHHHHCCEEEECCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LVVYHRRPGGQSQFSAMLELEPRSDRVKRALIYAKENLRNPLTVEELAQAASLSPRQFTR
HHHHCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
VFREETGQSPAKAVERLRLEAAKVMLEEGRHPMDIVARDTGFADRDRMRRAFLRFFGHPP
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCH
QTMRRVQRLGEADDATGDDGLAADMPGAPLVPERTT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSVAFIMEDGFQVMGLAAISAFEFANLQLGEQAYSISIMSEKGGSILSTLGMKVETASL
CCCEEEEHHCCCHHHHHHHHHHHHHHCCEECCCEEEEEEECCCCCHHHHHHCCEEEECCC
GSFPDTLMVLGELRPKPISPVLRDYIAAAGQNSRRVAGVCTGAFILAEAGLLDGRSATTH
CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHH
WAHSRALQSRFPTVRVDDDRIFIQDGHIWTSAGMSSAIDLALALIEDDYDATLARNIARR
HHHHHHHHHHCCEEEECCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LVVYHRRPGGQSQFSAMLELEPRSDRVKRALIYAKENLRNPLTVEELAQAASLSPRQFTR
HHHHCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
VFREETGQSPAKAVERLRLEAAKVMLEEGRHPMDIVARDTGFADRDRMRRAFLRFFGHPP
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCH
QTMRRVQRLGEADDATGDDGLAADMPGAPLVPERTT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]