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Identifier: 15835497

GI number: 15835497

Start: 1026842

End: 1027633

Strand: Reverse

Name: Not Available

Synonym: TC0883

Alternate gene names: 15835497

Gene position: 1027633-1026842 (Counterclockwise)

Preceding gene: 15835498

Following gene: 15835496

Centisome position: 95.78

GC content: 42.55

Gene sequence:

>792_bases
ATGGAGATAACCGATGCGCATGTACATCTTTCATCCGAAGAATTTATAGAAGATTTCGGAGAAGTGTGTTTAAGAGGTAA
GACAGCGGGAGTAACCAGGGTTGTTAACGTAACCACCACAAAAGCAGAATTATTACGTTCTTTTGCTTACGCGGAGCAAT
ATCCTTCTTGGCTTTTTTATCATGTGGCAGGGACTCCTCCTCAGGATGCACAGGAAGATATTGAGGAAGATTTTCAAGAA
TTTTGTCGAGCAGCGGAGGGAGGAAAACTTGCCGCTATTGGGGAAGTCGGCCTAGATTATTTATTCGCTGTGCAAGAGTC
TGAACAGGAGCGGCAGAAGGAGGTGCTTCATCGTTATTTACAATTAGCTTTACAGCATGAACTTCCCCTTGTTGTGCATT
GTCGAGGGGCTTTTGAAGATTTCTTTCATATCTTAGATCATGCATATCGTGCAGATAAACGAGCTAGACCCGGTATGTTG
CACTGTTTCACTGGAACGTATGAAGAAGCAAAAGAGTTATTGGCTCGCGATTGGTACATTTCCATTAGTGGAATTGTCAC
TTTTAAAAATGCGCAGGGGTTGCGAGATCTTGTGAAGGAGATTCCTTTAGAGAGATTATTAGTGGAAACGGATGCTCCTT
ATCTTGCCCCTACGCCTCTTCGTGGGAAGAGAAATGAGCCTGCTAATATTATTTATACCTTAATGCAAATTGCAGAAATA
AAAGGGATCCCTCTTAACGAATTACAGGAAGCGGTTAGTGCTAATGTCCAAAGATGGTTGCGAGGTTCTTAA

Upstream 100 bases:

>100_bases
GATTTTTACTAAGTAGTAGCTCTCTTATAAAAATTTTTCCCTCTAAAAGGGGCTTTTCCTTCATGATTCTTGATTGAGAA
AGATTGATTACGAGGAGAAT

Downstream 100 bases:

>100_bases
GATAAAAGAAGGGTCTTTCGGTTGAGGGATATAGTGACTATTTGCTAACGTCGGGTTAAGTACGTGGCTCAGGAAAGATG
CTGTTTTGGGAATCTTTCAT

Product: mttC protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MEITDAHVHLSSEEFIEDFGEVCLRGKTAGVTRVVNVTTTKAELLRSFAYAEQYPSWLFYHVAGTPPQDAQEDIEEDFQE
FCRAAEGGKLAAIGEVGLDYLFAVQESEQERQKEVLHRYLQLALQHELPLVVHCRGAFEDFFHILDHAYRADKRARPGML
HCFTGTYEEAKELLARDWYISISGIVTFKNAQGLRDLVKEIPLERLLVETDAPYLAPTPLRGKRNEPANIIYTLMQIAEI
KGIPLNELQEAVSANVQRWLRGS

Sequences:

>Translated_263_residues
MEITDAHVHLSSEEFIEDFGEVCLRGKTAGVTRVVNVTTTKAELLRSFAYAEQYPSWLFYHVAGTPPQDAQEDIEEDFQE
FCRAAEGGKLAAIGEVGLDYLFAVQESEQERQKEVLHRYLQLALQHELPLVVHCRGAFEDFFHILDHAYRADKRARPGML
HCFTGTYEEAKELLARDWYISISGIVTFKNAQGLRDLVKEIPLERLLVETDAPYLAPTPLRGKRNEPANIIYTLMQIAEI
KGIPLNELQEAVSANVQRWLRGS
>Mature_263_residues
MEITDAHVHLSSEEFIEDFGEVCLRGKTAGVTRVVNVTTTKAELLRSFAYAEQYPSWLFYHVAGTPPQDAQEDIEEDFQE
FCRAAEGGKLAAIGEVGLDYLFAVQESEQERQKEVLHRYLQLALQHELPLVVHCRGAFEDFFHILDHAYRADKRARPGML
HCFTGTYEEAKELLARDWYISISGIVTFKNAQGLRDLVKEIPLERLLVETDAPYLAPTPLRGKRNEPANIIYTLMQIAEI
KGIPLNELQEAVSANVQRWLRGS

Specific function: Unknown

COG id: COG0084

COG function: function code L; Mg-dependent DNase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatD DNase family [H]

Homologues:

Organism=Homo sapiens, GI110349734, Length=262, Percent_Identity=32.824427480916, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI110349730, Length=262, Percent_Identity=32.4427480916031, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI226061853, Length=268, Percent_Identity=32.4626865671642, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI225903424, Length=175, Percent_Identity=34.8571428571429, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI226061614, Length=260, Percent_Identity=29.6153846153846, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI226061595, Length=230, Percent_Identity=31.7391304347826, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI225903439, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI14042943, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1787342, Length=264, Percent_Identity=35.6060606060606, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI48994985, Length=259, Percent_Identity=35.5212355212355, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI87082439, Length=255, Percent_Identity=27.843137254902, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17559024, Length=222, Percent_Identity=34.2342342342342, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71980746, Length=270, Percent_Identity=27.037037037037, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17543026, Length=185, Percent_Identity=34.5945945945946, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17565396, Length=211, Percent_Identity=32.7014218009479, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24648690, Length=224, Percent_Identity=32.5892857142857, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24586117, Length=223, Percent_Identity=31.390134529148, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI221330018, Length=223, Percent_Identity=31.390134529148, Blast_Score=81, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR018228
- InterPro:   IPR012278
- InterPro:   IPR015991 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: 3.1.21.-

Molecular weight: Translated: 29906; Mature: 29906

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS01090 TATD_2 ; PS01091 TATD_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITDAHVHLSSEEFIEDFGEVCLRGKTAGVTRVVNVTTTKAELLRSFAYAEQYPSWLFY
CCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEE
HVAGTPPQDAQEDIEEDFQEFCRAAEGGKLAAIGEVGLDYLFAVQESEQERQKEVLHRYL
EECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLALQHELPLVVHCRGAFEDFFHILDHAYRADKRARPGMLHCFTGTYEEAKELLARDWYI
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCEE
SISGIVTFKNAQGLRDLVKEIPLERLLVETDAPYLAPTPLRGKRNEPANIIYTLMQIAEI
EEEEEEEECCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KGIPLNELQEAVSANVQRWLRGS
CCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEITDAHVHLSSEEFIEDFGEVCLRGKTAGVTRVVNVTTTKAELLRSFAYAEQYPSWLFY
CCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEE
HVAGTPPQDAQEDIEEDFQEFCRAAEGGKLAAIGEVGLDYLFAVQESEQERQKEVLHRYL
EECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLALQHELPLVVHCRGAFEDFFHILDHAYRADKRARPGMLHCFTGTYEEAKELLARDWYI
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCEE
SISGIVTFKNAQGLRDLVKEIPLERLLVETDAPYLAPTPLRGKRNEPANIIYTLMQIAEI
EEEEEEEECCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KGIPLNELQEAVSANVQRWLRGS
CCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]