| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834894
GI number: 15834894
Start: 328565
End: 329158
Strand: Reverse
Name: Not Available
Synonym: TC0274
Alternate gene names: NA
Gene position: 329158-328565 (Counterclockwise)
Preceding gene: 161579047
Following gene: 15834893
Centisome position: 30.68
GC content: 42.42
Gene sequence:
>594_bases GTGATTGAAAACATGCCCTCCACCGTTGCGCCTGTAAAAGGACCTGATCATTTTTTAAATCTTGTCTTTCCTGAAAGGGT TTTCGCTTCCTATATGAGCCCTTTAGCTCAGAAACATCCTAAGGCGGCACTGTATATAGCTTCTCTCGCAGGGTTTATTT TCGGATTACTTAAACTCATTACGTTTCCAGTACTTTGTGCAGCGGGTCTGTTCGTTTTTCCTATCAAAGGCATAATTTCT AGCTTATGCCATAGACGCTTGGATGCTTGTTCTGGATACATGCTAGCAACTTTCCTTTCCCTTTTTTCCTTAGCGCTTAT CATTGTCGGTATTGTCAGTTGCGTCGCTTGGGCTCCTGAGTTTATTTTCCCCATAATATCGATCGGTATGGCTTTAGCCA CCACAGAGACTTGTTTCCAAATTTACACGCACCTTTTCCCTGCTTTAGAACATAAACCTTCCTCTCCTCTCAAAATTGAA AATACGACAACAAAGCTCTCTCGTTCTTCATCCGCTCCCGATCTCAGTTGCCCGTCCCTATCTACACAACCTACTTCTCC CAATCAGTCTCTTTCTGCATACAAAAAATATTAA
Upstream 100 bases:
>100_bases AACTATAAATAAAATAGATACAATTTTTCGATTTTTTGTCAGAATATCTCCCGGATAGAAATTTTTATGCCTGCAATGCG GGCTTCATCTTACATAAAAT
Downstream 100 bases:
>100_bases ATTAAGATCTTAACCTTTTATTAAAAACAGTCTCACTAAAACTCTTATATTATCTTATAATAGTTCTGGTACTTAGCGTT TTTTGTTTTTTGGTAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MIENMPSTVAPVKGPDHFLNLVFPERVFASYMSPLAQKHPKAALYIASLAGFIFGLLKLITFPVLCAAGLFVFPIKGIIS SLCHRRLDACSGYMLATFLSLFSLALIIVGIVSCVAWAPEFIFPIISIGMALATTETCFQIYTHLFPALEHKPSSPLKIE NTTTKLSRSSSAPDLSCPSLSTQPTSPNQSLSAYKKY
Sequences:
>Translated_197_residues MIENMPSTVAPVKGPDHFLNLVFPERVFASYMSPLAQKHPKAALYIASLAGFIFGLLKLITFPVLCAAGLFVFPIKGIIS SLCHRRLDACSGYMLATFLSLFSLALIIVGIVSCVAWAPEFIFPIISIGMALATTETCFQIYTHLFPALEHKPSSPLKIE NTTTKLSRSSSAPDLSCPSLSTQPTSPNQSLSAYKKY >Mature_197_residues MIENMPSTVAPVKGPDHFLNLVFPERVFASYMSPLAQKHPKAALYIASLAGFIFGLLKLITFPVLCAAGLFVFPIKGIIS SLCHRRLDACSGYMLATFLSLFSLALIIVGIVSCVAWAPEFIFPIISIGMALATTETCFQIYTHLFPALEHKPSSPLKIE NTTTKLSRSSSAPDLSCPSLSTQPTSPNQSLSAYKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0442/CT_006/TC_0274 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21406; Mature: 21406
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENMPSTVAPVKGPDHFLNLVFPERVFASYMSPLAQKHPKAALYIASLAGFIFGLLKLI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TFPVLCAAGLFVFPIKGIISSLCHRRLDACSGYMLATFLSLFSLALIIVGIVSCVAWAPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIFPIISIGMALATTETCFQIYTHLFPALEHKPSSPLKIENTTTKLSRSSSAPDLSCPSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCCCCCCCCCC STQPTSPNQSLSAYKKY CCCCCCCCHHHHHHHCC >Mature Secondary Structure MIENMPSTVAPVKGPDHFLNLVFPERVFASYMSPLAQKHPKAALYIASLAGFIFGLLKLI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TFPVLCAAGLFVFPIKGIISSLCHRRLDACSGYMLATFLSLFSLALIIVGIVSCVAWAPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIFPIISIGMALATTETCFQIYTHLFPALEHKPSSPLKIENTTTKLSRSSSAPDLSCPSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCCCCCCCCCC STQPTSPNQSLSAYKKY CCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]