| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834870
GI number: 15834870
Start: 291657
End: 293150
Strand: Reverse
Name: Not Available
Synonym: TC0250
Alternate gene names: NA
Gene position: 293150-291657 (Counterclockwise)
Preceding gene: 15834871
Following gene: 15834866
Centisome position: 27.32
GC content: 41.43
Gene sequence:
>1494_bases ATGACGATCCCAGCAACTCAAGAAACACCCCCTTCACCACAAATAATATTATCCGGAGAGCAGCCAGAAACTGCTTGTGA AGCAACCTCTGATCTTTCTATCGACGTGCAAGTTCCCGAATCACAGCAATTAGCTTTAGTAAGAAACCTTTCTGACCTTT GTGTATCTGTCATTACACAAACAGAAAAAACTCTTTCCCCCGAGACCAAATACTTTTCTCCACAAAAAGAGCCTCTACTT ACTCAATATACCTCTAAACAATCCGGTTCTTCTTCTCGAATAATCATCTCCACATCTACTCAGGAATCCTCAACAAGTCA ATCGGAGCGCAATCATTCTCAAAGCCAAAGCATGCTGCAACGCACAATTCCTTCCCCTAAAACTTCCTCAACCTCTTCTA TGCAAGGACGTTTATGCACAACTTCACAACAAACTGTTCCTCTAAGAGGCACACCACTTACAGTTTCGCTACCTTGCCCT CATCTTACACAAACTAACCAAGCTACTTCACGAAGCACAGTTCTAACCTTGAATGTTCCTGTTAAGATCTTCAGCAAAGA AAGTCCTCTTGCCTCAGTGAAAAATCGCTCTGCAATGCTTACCAAGGATTCCAGTCATCTTTCTTCATCTCGAGAGAAAC TTTCTCCCTTTCGAGCACCTCTCAGCCCTATGGCGCTTTTTGAGACAGCGGCACATAAAGAGACTGTTATCAGAGAAAGG CTATCACATGATCAAGAAAGTCATTCTAAAGACGTCGATCAGGAGCGCAATCACAATCAAGATCACTCTGACCAACAAGA AGAAAAGGAAGATTTATCAAATGAAACAGATGTTTCTCCTTGTACAAGGAAACAACAGAAACAAAACTTTCATCCAGAAT CTTTACCTCAAGAGGTTTGTGAGTTTGCTCTTTCCCAGTCTCAACTCAGTCAATTGCTACGCATGCGCATAAACCATTTA GATATTTTGCGCATCTGTGCAGAAATCATGAAACTTATGCTCAACAGCCGAGAACAAAATCTTCTTGAACGAAGATCCGC TCGAGAACACTTCATGCAGGAAGCTAAAACTATTGCTAATTCCTTCTCTAAACAAGCTCAAATTACAAAATGGCTAGGCA TTGCCACAGCTACCTTAGGTATTTTCGGAGCGATTTCTCCCATAATTGGAGAAGTCGGAGGAGAAGGGCTACTCAATATC ATCCGTAGAGCAACGGGAGGCTGGAAACAATCTTCATCAAAAGTTTTCTTTGAAGGAATGGGGAAAGTCTGTGCCTCTCT GTCCGAGTTAGCAAAAGTCTCTTCAACTATTTATGATCTTCGTGCCAATGCAACACGAACTATAGCAGAAAGTTATAAAG AAATTTTTCGCTTAGAACACGATGAAATGGTCCGATCAATAGAAGAGCTCAAAGATCACTGGAGAAATATGGACAGCTTC TTACTACAAATTCTACAAACACAACATGATGCTGCCCGCAGTCTTTATCAATAA
Upstream 100 bases:
>100_bases TTCTATGCAAACCTCTTTTGAACAACTCTCAGAAACCCTACAATTACAAAAAGAAATTGGCCAGACATTTGTAGAAGCCT TACGATAGCGATTCAGAATT
Downstream 100 bases:
>100_bases GATGAAGTTTCTTCATCTTATTGATTTCACTGCAATTCTTTAGGGAGTTGAAATATGGTATCTTCTTCTACAAAAAGATC CGTTTCTACAACTAAAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MTIPATQETPPSPQIILSGEQPETACEATSDLSIDVQVPESQQLALVRNLSDLCVSVITQTEKTLSPETKYFSPQKEPLL TQYTSKQSGSSSRIIISTSTQESSTSQSERNHSQSQSMLQRTIPSPKTSSTSSMQGRLCTTSQQTVPLRGTPLTVSLPCP HLTQTNQATSRSTVLTLNVPVKIFSKESPLASVKNRSAMLTKDSSHLSSSREKLSPFRAPLSPMALFETAAHKETVIRER LSHDQESHSKDVDQERNHNQDHSDQQEEKEDLSNETDVSPCTRKQQKQNFHPESLPQEVCEFALSQSQLSQLLRMRINHL DILRICAEIMKLMLNSREQNLLERRSAREHFMQEAKTIANSFSKQAQITKWLGIATATLGIFGAISPIIGEVGGEGLLNI IRRATGGWKQSSSKVFFEGMGKVCASLSELAKVSSTIYDLRANATRTIAESYKEIFRLEHDEMVRSIEELKDHWRNMDSF LLQILQTQHDAARSLYQ
Sequences:
>Translated_497_residues MTIPATQETPPSPQIILSGEQPETACEATSDLSIDVQVPESQQLALVRNLSDLCVSVITQTEKTLSPETKYFSPQKEPLL TQYTSKQSGSSSRIIISTSTQESSTSQSERNHSQSQSMLQRTIPSPKTSSTSSMQGRLCTTSQQTVPLRGTPLTVSLPCP HLTQTNQATSRSTVLTLNVPVKIFSKESPLASVKNRSAMLTKDSSHLSSSREKLSPFRAPLSPMALFETAAHKETVIRER LSHDQESHSKDVDQERNHNQDHSDQQEEKEDLSNETDVSPCTRKQQKQNFHPESLPQEVCEFALSQSQLSQLLRMRINHL DILRICAEIMKLMLNSREQNLLERRSAREHFMQEAKTIANSFSKQAQITKWLGIATATLGIFGAISPIIGEVGGEGLLNI IRRATGGWKQSSSKVFFEGMGKVCASLSELAKVSSTIYDLRANATRTIAESYKEIFRLEHDEMVRSIEELKDHWRNMDSF LLQILQTQHDAARSLYQ >Mature_496_residues TIPATQETPPSPQIILSGEQPETACEATSDLSIDVQVPESQQLALVRNLSDLCVSVITQTEKTLSPETKYFSPQKEPLLT QYTSKQSGSSSRIIISTSTQESSTSQSERNHSQSQSMLQRTIPSPKTSSTSSMQGRLCTTSQQTVPLRGTPLTVSLPCPH LTQTNQATSRSTVLTLNVPVKIFSKESPLASVKNRSAMLTKDSSHLSSSREKLSPFRAPLSPMALFETAAHKETVIRERL SHDQESHSKDVDQERNHNQDHSDQQEEKEDLSNETDVSPCTRKQQKQNFHPESLPQEVCEFALSQSQLSQLLRMRINHLD ILRICAEIMKLMLNSREQNLLERRSAREHFMQEAKTIANSFSKQAQITKWLGIATATLGIFGAISPIIGEVGGEGLLNII RRATGGWKQSSSKVFFEGMGKVCASLSELAKVSSTIYDLRANATRTIAESYKEIFRLEHDEMVRSIEELKDHWRNMDSFL LQILQTQHDAARSLYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55570; Mature: 55439
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPATQETPPSPQIILSGEQPETACEATSDLSIDVQVPESQQLALVRNLSDLCVSVITQ CCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH TEKTLSPETKYFSPQKEPLLTQYTSKQSGSSSRIIISTSTQESSTSQSERNHSQSQSMLQ HHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH RTIPSPKTSSTSSMQGRLCTTSQQTVPLRGTPLTVSLPCPHLTQTNQATSRSTVLTLNVP HHCCCCCCCCCCCCCCCEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECC VKIFSKESPLASVKNRSAMLTKDSSHLSSSREKLSPFRAPLSPMALFETAAHKETVIRER EEEECCCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LSHDQESHSKDVDQERNHNQDHSDQQEEKEDLSNETDVSPCTRKQQKQNFHPESLPQEVC HHCCHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHH EFALSQSQLSQLLRMRINHLDILRICAEIMKLMLNSREQNLLERRSAREHFMQEAKTIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SFSKQAQITKWLGIATATLGIFGAISPIIGEVGGEGLLNIIRRATGGWKQSSSKVFFEGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH GKVCASLSELAKVSSTIYDLRANATRTIAESYKEIFRLEHDEMVRSIEELKDHWRNMDSF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHH LLQILQTQHDAARSLYQ HHHHHHHHHHHHHHHCC >Mature Secondary Structure TIPATQETPPSPQIILSGEQPETACEATSDLSIDVQVPESQQLALVRNLSDLCVSVITQ CCCCCCCCCCCCCEEECCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH TEKTLSPETKYFSPQKEPLLTQYTSKQSGSSSRIIISTSTQESSTSQSERNHSQSQSMLQ HHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH RTIPSPKTSSTSSMQGRLCTTSQQTVPLRGTPLTVSLPCPHLTQTNQATSRSTVLTLNVP HHCCCCCCCCCCCCCCCEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECC VKIFSKESPLASVKNRSAMLTKDSSHLSSSREKLSPFRAPLSPMALFETAAHKETVIRER EEEECCCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LSHDQESHSKDVDQERNHNQDHSDQQEEKEDLSNETDVSPCTRKQQKQNFHPESLPQEVC HHCCHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHH EFALSQSQLSQLLRMRINHLDILRICAEIMKLMLNSREQNLLERRSAREHFMQEAKTIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SFSKQAQITKWLGIATATLGIFGAISPIIGEVGGEGLLNIIRRATGGWKQSSSKVFFEGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH GKVCASLSELAKVSSTIYDLRANATRTIAESYKEIFRLEHDEMVRSIEELKDHWRNMDSF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHH LLQILQTQHDAARSLYQ HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA