| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834855
GI number: 15834855
Start: 276105
End: 276623
Strand: Reverse
Name: Not Available
Synonym: TC0235
Alternate gene names: NA
Gene position: 276623-276105 (Counterclockwise)
Preceding gene: 15834856
Following gene: 15834854
Centisome position: 25.78
GC content: 40.85
Gene sequence:
>519_bases ATGAGTAGTGCAATCATACCTGATCTACCAAAGAGAACTATTGTTACACCAGACTCCACGTTGGTAGTACCCAAATCCAT TGAAATCAATAAGCAGTCTGCTATGTATTTTTGCATCGCTGTCATGCTTCAACTTTCTTCATCCACAACAGAGTACAGTC AGGCCATTATGTCTGTTCTGCAAGAAAATACACTCGAACAACAACGCAAAACCAAAGAGCTGATTAACCTCCCATTGTTA TACGTTCCATCTTTGGAAAAAAAACAAGGGTCTGACGATGAATACACTAACAATACTACGATTCAAGCTTTTCAGACATC CAACCAACAAATTACTGCCAATAGGGAGCTTATCCAACAAGAGCTAGCAGCCGCTCAACAACGCGCCCAAGCAAACCAAA AATCAGTGAATGCTACATCCACAGAATCCATGCAAATTCTTCAAGCAGTTTCCGCTCTCCTCTCCTCTCTTGTCGATTTA ACTATTAAAGCAAACCTTACAACCTCCCCTTCAGATTAA
Upstream 100 bases:
>100_bases ACAACATTATCCAACAATCTTTGCAAGTTGGTCAGGCGCTCATTCAAACATTCTCACAAATCGTTAGCTTGATCGCAAAC ATCTAAAAAAAGGTATCCAG
Downstream 100 bases:
>100_bases ATTTTTAGGCGCTGAGGTTTCCTTGCGCCTAAAAAAACAAACTTATAAGAGAACAAAAGGAAGGTTGACAGCCAAAAACA CAGCCTAGATAATAGGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSSAIIPDLPKRTIVTPDSTLVVPKSIEINKQSAMYFCIAVMLQLSSSTTEYSQAIMSVLQENTLEQQRKTKELINLPLL YVPSLEKKQGSDDEYTNNTTIQAFQTSNQQITANRELIQQELAAAQQRAQANQKSVNATSTESMQILQAVSALLSSLVDL TIKANLTTSPSD
Sequences:
>Translated_172_residues MSSAIIPDLPKRTIVTPDSTLVVPKSIEINKQSAMYFCIAVMLQLSSSTTEYSQAIMSVLQENTLEQQRKTKELINLPLL YVPSLEKKQGSDDEYTNNTTIQAFQTSNQQITANRELIQQELAAAQQRAQANQKSVNATSTESMQILQAVSALLSSLVDL TIKANLTTSPSD >Mature_171_residues SSAIIPDLPKRTIVTPDSTLVVPKSIEINKQSAMYFCIAVMLQLSSSTTEYSQAIMSVLQENTLEQQRKTKELINLPLLY VPSLEKKQGSDDEYTNNTTIQAFQTSNQQITANRELIQQELAAAQQRAQANQKSVNATSTESMQILQAVSALLSSLVDLT IKANLTTSPSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18924; Mature: 18792
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAIIPDLPKRTIVTPDSTLVVPKSIEINKQSAMYFCIAVMLQLSSSTTEYSQAIMSVL CCCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QENTLEQQRKTKELINLPLLYVPSLEKKQGSDDEYTNNTTIQAFQTSNQQITANRELIQQ HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHH ELAAAQQRAQANQKSVNATSTESMQILQAVSALLSSLVDLTIKANLTTSPSD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC >Mature Secondary Structure SSAIIPDLPKRTIVTPDSTLVVPKSIEINKQSAMYFCIAVMLQLSSSTTEYSQAIMSVL CCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QENTLEQQRKTKELINLPLLYVPSLEKKQGSDDEYTNNTTIQAFQTSNQQITANRELIQQ HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHH ELAAAQQRAQANQKSVNATSTESMQILQAVSALLSSLVDLTIKANLTTSPSD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA