Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

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Identifier: 15834846

GI number: 15834846

Start: 265653

End: 266753

Strand: Reverse

Name: Not Available

Synonym: TC0226

Alternate gene names: NA

Gene position: 266753-265653 (Counterclockwise)

Preceding gene: 15834847

Following gene: 15834840

Centisome position: 24.86

GC content: 38.6

Gene sequence:

>1101_bases
ATGGCTATCTGGAAACGCTACATTCTCGCTCGCTTCTGGCTCTCCCTTTCTTCTTTATTTTTTTTAGCGGTTATATTCTA
TGCTTCCATTCACCATTCATTACACGCTTTTCGGGAAGGGAAGACAGCTATTGCTGGAGCCCCTTTACAACTATCCTTGC
TTTACTACCTTTCTCAAATTTCTTTGAAAGCGGAATTTATTCTTCCTCAACTTGTAGCGATTGCTTCAACAATTACTCTG
TTCTCAATGCAAAGCAAACGAGAAATTCTTTTGTTACAAGCTTCAGGTCTTTCGCTTAAAACTGTAATTCGCCCATTAAT
TCTGTCTAGTACCTTAGTTACCCTTCTTCTTTATGCGAACTTCCAATGGCTCCATCCCATTTGCGAAAAGATTTCTATTA
CAAAAGAGCATATGGACAAAGGGACCTTAGAAAAAGCTCAGGAAAAAATTCCCGCGCTTTATCTGAAAGATCAAACCGTT
CTTATTTTCTCTTCCATTAATCATAAGGCGGCTACCCTGAATAATGTTTTTTGGATTAAAGGACCCAAAACGATCTACTC
TATCAAAAAACTCGCTTTCACTACCCCATCCCTTCCTATTGGACTTGAGGTTTCTTATTTTTCTGAAGACGAAAATCACG
AGATATCTCTAACTCAGTTCTTTGATATGAAAGAGTTCCCTGAATTAGAATTCAGCTATTACGACAATCCGTTTTCAAAA
ATTTTCATAACTGGAAGAGATTGCAGCTTCTCAGCCTTTTTTCAGGCTATTCCTTGGCATGCAGCAAAGTTTGGTCTTTT
AACAACGGTTCCTCAAAGGATTTTATCCTTGCTCACGCTATTCTACTATATGCTCATCTCTCCCTTACTCTGCATAGCAT
CAGTAATCTTATCCGCCTACCTTTGCTTACGTTTTCATCGGCTTCCTAAAATTACTTGGGCCTACTTAGTTCCTTTAGGC
ACCATTAACATCTTTTTCGTGTTTTTGAAAGCAGGAATGGTTCTTGCTAATAACAGCGTTTTACCGGCTCTGCAAGTCAT
GTTTATTCCAGCTAGTGTTATGCTTATAATCACTCTATATGCTTACCGGAAACTTGCTTAA

Upstream 100 bases:

>100_bases
ATCCTATTTCAGCTTTAATGCTTTTCCTTTTTCCCCAACTACTCTCATGGCTAATTTTTTCTTGGCGAATATATAAAGAA
AATCAAGGACATGCATAGAT

Downstream 100 bases:

>100_bases
ATACCTGAAAACTTCCATTTCTCTAAATCATAAGAAAAGAATGCTTGAAGATCTTTCAGATTTTGACGATTTTTCCTTAA
ACAATTTAGAAACTTGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MAIWKRYILARFWLSLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQISLKAEFILPQLVAIASTITL
FSMQSKREILLLQASGLSLKTVIRPLILSSTLVTLLLYANFQWLHPICEKISITKEHMDKGTLEKAQEKIPALYLKDQTV
LIFSSINHKAATLNNVFWIKGPKTIYSIKKLAFTTPSLPIGLEVSYFSEDENHEISLTQFFDMKEFPELEFSYYDNPFSK
IFITGRDCSFSAFFQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIASVILSAYLCLRFHRLPKITWAYLVPLG
TINIFFVFLKAGMVLANNSVLPALQVMFIPASVMLIITLYAYRKLA

Sequences:

>Translated_366_residues
MAIWKRYILARFWLSLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQISLKAEFILPQLVAIASTITL
FSMQSKREILLLQASGLSLKTVIRPLILSSTLVTLLLYANFQWLHPICEKISITKEHMDKGTLEKAQEKIPALYLKDQTV
LIFSSINHKAATLNNVFWIKGPKTIYSIKKLAFTTPSLPIGLEVSYFSEDENHEISLTQFFDMKEFPELEFSYYDNPFSK
IFITGRDCSFSAFFQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIASVILSAYLCLRFHRLPKITWAYLVPLG
TINIFFVFLKAGMVLANNSVLPALQVMFIPASVMLIITLYAYRKLA
>Mature_365_residues
AIWKRYILARFWLSLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQISLKAEFILPQLVAIASTITLF
SMQSKREILLLQASGLSLKTVIRPLILSSTLVTLLLYANFQWLHPICEKISITKEHMDKGTLEKAQEKIPALYLKDQTVL
IFSSINHKAATLNNVFWIKGPKTIYSIKKLAFTTPSLPIGLEVSYFSEDENHEISLTQFFDMKEFPELEFSYYDNPFSKI
FITGRDCSFSAFFQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIASVILSAYLCLRFHRLPKITWAYLVPLGT
INIFFVFLKAGMVLANNSVLPALQVMFIPASVMLIITLYAYRKLA

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41667; Mature: 41536

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIWKRYILARFWLSLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH
SLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTVIRPLILSSTLVTLLLYAN
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
FQWLHPICEKISITKEHMDKGTLEKAQEKIPALYLKDQTVLIFSSINHKAATLNNVFWIK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCEEEEEECCCCCCEEECCEEEEE
GPKTIYSIKKLAFTTPSLPIGLEVSYFSEDENHEISLTQFFDMKEFPELEFSYYDNPFSK
CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHHHCHHCCCCCCEEECCCCCCE
IFITGRDCSFSAFFQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIASVILSAY
EEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCLRFHRLPKITWAYLVPLGTINIFFVFLKAGMVLANNSVLPALQVMFIPASVMLIITLY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHH
AYRKLA
HHHHCC
>Mature Secondary Structure 
AIWKRYILARFWLSLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH
SLKAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTVIRPLILSSTLVTLLLYAN
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
FQWLHPICEKISITKEHMDKGTLEKAQEKIPALYLKDQTVLIFSSINHKAATLNNVFWIK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCEEEEEECCCCCCEEECCEEEEE
GPKTIYSIKKLAFTTPSLPIGLEVSYFSEDENHEISLTQFFDMKEFPELEFSYYDNPFSK
CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHHHCHHCCCCCCEEECCCCCCE
IFITGRDCSFSAFFQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIASVILSAY
EEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCLRFHRLPKITWAYLVPLGTINIFFVFLKAGMVLANNSVLPALQVMFIPASVMLIITLY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHH
AYRKLA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA