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The map label for this gene is ftsY

Identifier: 15834827

GI number: 15834827

Start: 242988

End: 243842

Strand: Reverse

Name: ftsY

Synonym: TC0207

Alternate gene names: 15834827

Gene position: 243842-242988 (Counterclockwise)

Preceding gene: 15834832

Following gene: 15834821

Centisome position: 22.73

GC content: 41.99

Gene sequence:

>855_bases
GTGTTCAAGTTTTTCGGGAACAAACTTCGCTCTCTTTTTAAAAAGACTCTTCCTTCGGACTTATTGGAATATGCTGAAGC
TCTTTTATATGAGGGGGATTTTGGTCCTAAACTAACTGAAGCCTTTTGTAACGAATTACGTCGGCATAAACATCCTGATG
AGCGCTTGATTAAAGAGCTTATCCGCTCTTTTCTATCTGATATTATAGCTAAGTTACCTCAGAAAAAGAGCTCTTCTGCT
CACCCCCATGTGACTCTTATTTTAGGAACAAATGGCTCAGGGAAAACGACTACAGTAGCTAAACTCGCCCACTATTGTCT
TTCTCAGAACCAAACGGTTTTAATCGTAGCAACAGACACCTTCCGCTCTGCAGGAATGGAACAAATGCGTTGTTGGGCAG
ACTCTTTAGGTTGTGGATTTATTTCTGGTAAGCCAGGAGGGGATGCTGCCGCTATAGCTTTTGACGGCATCTCTGCTGCA
GTTGCTAGAAACTATGACCAAGTAATCATAGATACCTCTGGACGACTACATACTCACACGAACCTTCTCAAAGAACTTCA
AAAAATTGCCACTGTTTGCAATAAGGCTTTTCCTGGAGCGCCTCATGAAACTCTCATGACCGTTGATGCAACCTTGGGAA
GCAATACGTTAAGTCAGGTAAAATTATTCCATGAGGCGGTGCCTATCGATGGATTAATTTTTACAAAAATAGAAGGCTCC
GCTAAGGGGGGCTCCCTCTTTCGAATTGCTGACGAGCTAAAAATTCCTACACGATTTGTAGGATACGGAGAAACAGTTTA
CGATTTCGAACCATTTTCTATAGATCGCTTTCTCGATAAACTGCTGGATGTTTAA

Upstream 100 bases:

>100_bases
GGTCCTTAGCTTGATACTCATGAAGATGCATAAATAACCCTTTAATTTTTCCTCCTTATCTTTTATTATCCTTTTTACTT
CAATCAACTTTACCCTGTCT

Downstream 100 bases:

>100_bases
CAGAAATAAAATCTCTTTTAAACACAAAAGGAGATATTTAGAACAAATATCTCCTTCTTCTTTTAGCGTCTCTTATCTGA
AGAAGCAAAAATTTGTAGCA

Product: signal recognition particle protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFKFFGNKLRSLFKKTLPSDLLEYAEALLYEGDFGPKLTEAFCNELRRHKHPDERLIKELIRSFLSDIIAKLPQKKSSSA
HPHVTLILGTNGSGKTTTVAKLAHYCLSQNQTVLIVATDTFRSAGMEQMRCWADSLGCGFISGKPGGDAAAIAFDGISAA
VARNYDQVIIDTSGRLHTHTNLLKELQKIATVCNKAFPGAPHETLMTVDATLGSNTLSQVKLFHEAVPIDGLIFTKIEGS
AKGGSLFRIADELKIPTRFVGYGETVYDFEPFSIDRFLDKLLDV

Sequences:

>Translated_284_residues
MFKFFGNKLRSLFKKTLPSDLLEYAEALLYEGDFGPKLTEAFCNELRRHKHPDERLIKELIRSFLSDIIAKLPQKKSSSA
HPHVTLILGTNGSGKTTTVAKLAHYCLSQNQTVLIVATDTFRSAGMEQMRCWADSLGCGFISGKPGGDAAAIAFDGISAA
VARNYDQVIIDTSGRLHTHTNLLKELQKIATVCNKAFPGAPHETLMTVDATLGSNTLSQVKLFHEAVPIDGLIFTKIEGS
AKGGSLFRIADELKIPTRFVGYGETVYDFEPFSIDRFLDKLLDV
>Mature_284_residues
MFKFFGNKLRSLFKKTLPSDLLEYAEALLYEGDFGPKLTEAFCNELRRHKHPDERLIKELIRSFLSDIIAKLPQKKSSSA
HPHVTLILGTNGSGKTTTVAKLAHYCLSQNQTVLIVATDTFRSAGMEQMRCWADSLGCGFISGKPGGDAAAIAFDGISAA
VARNYDQVIIDTSGRLHTHTNLLKELQKIATVCNKAFPGAPHETLMTVDATLGSNTLSQVKLFHEAVPIDGLIFTKIEGS
AKGGSLFRIADELKIPTRFVGYGETVYDFEPFSIDRFLDKLLDV

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=243, Percent_Identity=30.4526748971193, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI4507215, Length=293, Percent_Identity=30.0341296928328, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI23308697, Length=303, Percent_Identity=25.7425742574257, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI295424842, Length=312, Percent_Identity=25.3205128205128, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=4e-16,
Organism=Escherichia coli, GI1789874, Length=224, Percent_Identity=42.8571428571429, Blast_Score=204, Evalue=7e-54,
Organism=Escherichia coli, GI1788963, Length=265, Percent_Identity=30.9433962264151, Blast_Score=134, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=205, Percent_Identity=28.780487804878, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI193206261, Length=253, Percent_Identity=28.0632411067194, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325345, Length=255, Percent_Identity=30.5882352941176, Blast_Score=121, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6320498, Length=249, Percent_Identity=29.3172690763052, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17647949, Length=278, Percent_Identity=29.8561151079137, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24641198, Length=273, Percent_Identity=26.007326007326, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 31243; Mature: 31243

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKFFGNKLRSLFKKTLPSDLLEYAEALLYEGDFGPKLTEAFCNELRRHKHPDERLIKEL
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
IRSFLSDIIAKLPQKKSSSAHPHVTLILGTNGSGKTTTVAKLAHYCLSQNQTVLIVATDT
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECC
FRSAGMEQMRCWADSLGCGFISGKPGGDAAAIAFDGISAAVARNYDQVIIDTSGRLHTHT
HHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCEEEEECCCCCHHHH
NLLKELQKIATVCNKAFPGAPHETLMTVDATLGSNTLSQVKLFHEAVPIDGLIFTKIEGS
HHHHHHHHHHHHHHHCCCCCCCHHEEEEECHHCCCHHHHHHHHHHHCCCCCEEEEEECCC
AKGGSLFRIADELKIPTRFVGYGETVYDFEPFSIDRFLDKLLDV
CCCCCEEEEHHHHCCCHHEECCCCEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MFKFFGNKLRSLFKKTLPSDLLEYAEALLYEGDFGPKLTEAFCNELRRHKHPDERLIKEL
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
IRSFLSDIIAKLPQKKSSSAHPHVTLILGTNGSGKTTTVAKLAHYCLSQNQTVLIVATDT
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECC
FRSAGMEQMRCWADSLGCGFISGKPGGDAAAIAFDGISAAVARNYDQVIIDTSGRLHTHT
HHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCEEEEECCCCCHHHH
NLLKELQKIATVCNKAFPGAPHETLMTVDATLGSNTLSQVKLFHEAVPIDGLIFTKIEGS
HHHHHHHHHHHHHHHCCCCCCCHHEEEEECHHCCCHHHHHHHHHHHCCCCCEEEEEECCC
AKGGSLFRIADELKIPTRFVGYGETVYDFEPFSIDRFLDKLLDV
CCCCCEEEEHHHHCCCHHEECCCCEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]