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The map label for this gene is cysS

Identifier: 15834784

GI number: 15834784

Start: 197316

End: 198743

Strand: Reverse

Name: cysS

Synonym: TC0164

Alternate gene names: 15834784

Gene position: 198743-197316 (Counterclockwise)

Preceding gene: 15834785

Following gene: 15834780

Centisome position: 18.52

GC content: 40.13

Gene sequence:

>1428_bases
ATGGATTTATTTCTATATAACACCCTATCGAGAGAAAAAGAACGTTTTCTCCCCTCTAATGATCCTGTTAAACTCTATAC
TTGTGGGCCAACTGTTTACGATTACGCTCATATAGGAAATTTCCGCACGTACGTTTTTGAAGATTTGCTAAAAAGAGTCC
TTCTTTTTTTAGGCTACTCTGTTCATCACGTAATGAACATTACTGATGTGGATGACAAGACTTTAGCCGGAGCTCGCAAA
AAGGGTTGTTCCCTCGAAAAATATTGCCAGCCTTATATTAACGCTTTTTTTGCTGATTTAGAAACCCTTCATATTTTGAA
AGCAGATGCCTACCCTCATGCTACCCACTATATTCCCCAAATGATCGAGGCCATTCAACAGCTTATTGATCAAGGTATTG
CCTATGTAGGACAAGACCAATCTGTCTATTTTTCTATTAGCCGGTTCCCTAATTATGGATCTCTTTCGCACCTGAATCTA
GAGGAGCTGCGACAGAGCTCTCGTATAGACGCAGATGAGTATGATAAAGACAACTTATGCGACTTCGTTTTATGGAAAGC
TTATGACCCTAATCGAGATGGAGAGATCTTCTGGGAAAGCCCTTTTGGAAAAGGACGTCCAGGATGGCATCTAGAGTGTT
CCATCATGTCTATGGCTCTTCTTGGCCAATCTCTTGATATTCATGCTGGAGGTGTAGATAACATCTTCCCTCACCATGAA
AATGAGATTGCACAATCCGAGTCATTATCGCGCAAACCCTTCGTACGCTACTGGCTACACTCTCATCACCTTCTTGTTGA
TGGAAAAAAAATGTCTAAAAGCTTGGGGAATTTCTTCACATTAAGAGATCTACTTCAACAAGGATTTTCTGGAGAAGAAG
TTCGGTATCTCTTACTACAAGGACATTACAGAACCCAATTAAATTTTACCCAAGAGGGATTACAAGCTGCCCGTCAGTCT
CTCAAACGCTTAAGGGATTTTATTAGCAGATTAGAAGATCCTTTCTATCCCGATGATATTATCCATCCAGAAGTAGGCTC
TGCTTGTCAGAATTTTTTAGAAGCCTTTGTGACTTCTATTACAAATGATCTAAATATCTCCTCAGCTTTAGCCTCTCTAT
TTGATTTTATCCGAAAAATCAATGGTATGATCGACCGCCAATCTATTCAGGAAGAAACCTCTTCTGAATTTTCTAAACAA
GACGCGCAACATATTCTCTCTTTATTGCGCCAGATAGACCAAGTTCTTGGTGTTTTACCATTTTCCCAGGCTGACATTCC
TGAAGATGTGTTATTGCTTGTAAAAGAGAGAGAAGCCGCTAGGAAAGTTAAGAATTGGAAAGAAGCAGATCGCCTTCGAG
ATGAGATCATATCCAGAGGTTTTGCCATCGAAGACGGCAAAACCGGGATGAAAGTGAAAAAGATTTAG

Upstream 100 bases:

>100_bases
GTAGAAAAATTCTATAGACTAAGCAGAAAGGGTTGCTTATCATGAGAAAGAGGATTCGCTCTAGCAGCACAAAACAAGGC
TTTTTCACATGCACAATGCT

Downstream 100 bases:

>100_bases
TCCTATTTTGACTCTATACGCCGCATAACAGGAAAGTACAGAACGTCTCGAATGGATGCGGCATCTGTCAACATCATAAC
TAACCGATCTATTCCTATTC

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MDLFLYNTLSREKERFLPSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGYSVHHVMNITDVDDKTLAGARK
KGCSLEKYCQPYINAFFADLETLHILKADAYPHATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNL
EELRQSSRIDADEYDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGGVDNIFPHHE
NEIAQSESLSRKPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQQGFSGEEVRYLLLQGHYRTQLNFTQEGLQAARQS
LKRLRDFISRLEDPFYPDDIIHPEVGSACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQ
DAQHILSLLRQIDQVLGVLPFSQADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGFAIEDGKTGMKVKKI

Sequences:

>Translated_475_residues
MDLFLYNTLSREKERFLPSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGYSVHHVMNITDVDDKTLAGARK
KGCSLEKYCQPYINAFFADLETLHILKADAYPHATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNL
EELRQSSRIDADEYDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGGVDNIFPHHE
NEIAQSESLSRKPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQQGFSGEEVRYLLLQGHYRTQLNFTQEGLQAARQS
LKRLRDFISRLEDPFYPDDIIHPEVGSACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQ
DAQHILSLLRQIDQVLGVLPFSQADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGFAIEDGKTGMKVKKI
>Mature_475_residues
MDLFLYNTLSREKERFLPSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGYSVHHVMNITDVDDKTLAGARK
KGCSLEKYCQPYINAFFADLETLHILKADAYPHATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNL
EELRQSSRIDADEYDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGGVDNIFPHHE
NEIAQSESLSRKPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQQGFSGEEVRYLLLQGHYRTQLNFTQEGLQAARQS
LKRLRDFISRLEDPFYPDDIIHPEVGSACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQ
DAQHILSLLRQIDQVLGVLPFSQADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGFAIEDGKTGMKVKKI

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=388, Percent_Identity=36.340206185567, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI21269877, Length=443, Percent_Identity=30.2483069977427, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI10835051, Length=443, Percent_Identity=30.2483069977427, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI62240992, Length=443, Percent_Identity=30.2483069977427, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI303304987, Length=443, Percent_Identity=30.2483069977427, Blast_Score=180, Evalue=3e-45,
Organism=Escherichia coli, GI1786737, Length=484, Percent_Identity=40.9090909090909, Blast_Score=333, Evalue=2e-92,
Organism=Caenorhabditis elegans, GI17509797, Length=262, Percent_Identity=37.4045801526718, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17509795, Length=262, Percent_Identity=37.4045801526718, Blast_Score=172, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6324082, Length=313, Percent_Identity=34.8242811501597, Blast_Score=177, Evalue=4e-45,
Organism=Drosophila melanogaster, GI19922218, Length=500, Percent_Identity=34.4, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI19922364, Length=276, Percent_Identity=36.231884057971, Blast_Score=174, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 54635; Mature: 54635

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFLYNTLSREKERFLPSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGYS
CCEEEEHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCH
VHHVMNITDVDDKTLAGARKKGCSLEKYCQPYINAFFADLETLHILKADAYPHATHYIPQ
HHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
MIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDADEYDKDNLC
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCH
DFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGGVDNIFPHHE
HEEEEECCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEECCCCCCCCCCCCC
NEIAQSESLSRKPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQQGFSGEEVRYLLLQ
HHHHHHHCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
GHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPEVGSACQNFLEAFVTSI
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQHILSLLRQIDQVLGVLP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FSQADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGFAIEDGKTGMKVKKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
>Mature Secondary Structure
MDLFLYNTLSREKERFLPSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGYS
CCEEEEHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCH
VHHVMNITDVDDKTLAGARKKGCSLEKYCQPYINAFFADLETLHILKADAYPHATHYIPQ
HHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
MIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDADEYDKDNLC
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCH
DFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGGVDNIFPHHE
HEEEEECCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEECCCCCCCCCCCCC
NEIAQSESLSRKPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQQGFSGEEVRYLLLQ
HHHHHHHCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
GHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPEVGSACQNFLEAFVTSI
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQHILSLLRQIDQVLGVLP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FSQADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGFAIEDGKTGMKVKKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA