Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340385
Identifier: 158340385
GI number: 158340385
Start: 220670
End: 220825
Strand: Reverse
Name: 158340385
Synonym: AM1_C0312
Alternate gene names: NA
Gene position: 220825-220670 (Counterclockwise)
Preceding gene: 158340387
Following gene: 158340384
Centisome position: 80.85
GC content: 49.36
Gene sequence:
>156_bases ATGAAAATCCACATCGCCAAAATCGAAGTCTGGAATGGCCGCTCCTTCCAGTTGATTGATTTCCAACAAGCCCAAACCCA GGAAAGCCTTGGGGCGGTCATCAGGGAGTACGTGGCTGCGATGGGGTTGAGGTTAATCTATTGGTATGAGTCTTAG
Upstream 100 bases:
>100_bases ACCTTTCTCTTTCTTGTCTTATCTTTGCTTTTTCCCTCACACTTGCTGCTCCTTGGTTCACTGCCGGGGGGCTTCCTTCT GAATCACCGGAGGTAATCCC
Downstream 100 bases:
>100_bases ATTCAATTATTAGATAAGACATTGGATATCTTATCCAAAACGATGAAACTCATCATTCTAGATAAGGACGGAACTCTCAC TACCCCCAAAAGGGCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 51; Mature: 51
Protein sequence:
>51_residues MKIHIAKIEVWNGRSFQLIDFQQAQTQESLGAVIREYVAAMGLRLIYWYES
Sequences:
>Translated_51_residues MKIHIAKIEVWNGRSFQLIDFQQAQTQESLGAVIREYVAAMGLRLIYWYES >Mature_51_residues MKIHIAKIEVWNGRSFQLIDFQQAQTQESLGAVIREYVAAMGLRLIYWYES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6003; Mature: 6003
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHIAKIEVWNGRSFQLIDFQQAQTQESLGAVIREYVAAMGLRLIYWYES CEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure MKIHIAKIEVWNGRSFQLIDFQQAQTQESLGAVIREYVAAMGLRLIYWYES CEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA