Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is mreB [H]
Identifier: 158317025
GI number: 158317025
Start: 6337803
End: 6338834
Strand: Reverse
Name: mreB [H]
Synonym: Franean1_5269
Alternate gene names: 158317025
Gene position: 6338834-6337803 (Counterclockwise)
Preceding gene: 158317026
Following gene: 158317024
Centisome position: 70.57
GC content: 67.73
Gene sequence:
>1032_bases ATGTCCAGTTCGCTGTCATTCCTCGGTCGTGACATGGCCGTCGACCTTGGTACCGCCAACACGCTCGTCTACGTCCGCGG CAGGGGGATCGTCCTCAACGAGCCCAGTGTGGTGGCGATCAATACGACCACCTCGGGCATCCTCGCCGTCGGCACCGACG CCAAGCGGATGATCGGGCGCACCCCGGGCAACGTGGTGGCCGTCCGCCCGCTGAAGGACGGCGTGATCGCCGACTTCGAG ACCACCGAGCGGATGCTGCGCTACTTCATCCAGAAGGTGCACCGCCGCCGGCACTTCGCCAAGCCGCGGCTGGTGGTGTG CGTGCCGTCCGGTATCACCGGGGTGGAGCAGCGGGCCGTCAAGGACGCCGGCTACCAGGCCGGGGCCCGCAAGGTCTACA TCATCGAGGAACCGATGGCGGCGGCGATCGGTGCCGGCCTGCCCGTCCACGAGCCGACCGGGAACATGGTCGTCGACATC GGCGGCGGCACGACCGAGGTGGCGGTCATCTCCCTCGGTGGGATCGTCACCAGCCAGTCGATCCGCACGGCCGGTGACGA GCTCGATACGGCGATCATCTCCTACGTCAAGAAGGAGTACTCGCTGATGCTCGGCGAGCGGACCGCCGAGGAGATCAAGA TGGCCATCGGCTCGGCGCACAAGATCCCGGACGAGCCGAGCGCGGAGATCCGCGGCCGTGACCTCGTCACGGGCCTGCCC AAGACGATCGTGGTGACCGCCGAAGAGATCCGCAAGGCCATCGAGGAGCCGGTGAACGCGGTGATCGACGCCGTGAAGGT CACCCTCGACAGGTGCCCTCCGGAGCTCTCCGGCGACATCATGGACCGCGGGATCGTGCTGACCGGTGGTGGGGCGCTGC TGCGCGGGCTCGACGAGCGCCTGCGCCACGAGACCGGGATGCCGATCCACATCGCGGAGAACCCGCTGCACTCGGTGGCG ATGGGCTCGGGCAAGTGCGTCGAGGAGTTCGAGGCGCTCCAGCAGGTCCTGATCTCCGAACCGAAACGCTGA
Upstream 100 bases:
>100_bases GTTTCGCGCGTTGGTTCGGAGACGGGCCGGTCGGTGACGCCCGCGTGCGCCGCCCGGACCCGTCCCACCTCGCGCCCCCC GGGAAGGCCGGCACCCGACG
Downstream 100 bases:
>100_bases CCGCGGCCCGGGGCCGGGGCCGGGAACCCAGCCGGCCCGCCGCTCGTCCGACCAGGAAGATCGACGGTCGCGGGCGCGGC GTGTCGTGGCGGCGCCGGTC
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSSSLSFLGRDMAVDLGTANTLVYVRGRGIVLNEPSVVAINTTTSGILAVGTDAKRMIGRTPGNVVAVRPLKDGVIADFE TTERMLRYFIQKVHRRRHFAKPRLVVCVPSGITGVEQRAVKDAGYQAGARKVYIIEEPMAAAIGAGLPVHEPTGNMVVDI GGGTTEVAVISLGGIVTSQSIRTAGDELDTAIISYVKKEYSLMLGERTAEEIKMAIGSAHKIPDEPSAEIRGRDLVTGLP KTIVVTAEEIRKAIEEPVNAVIDAVKVTLDRCPPELSGDIMDRGIVLTGGGALLRGLDERLRHETGMPIHIAENPLHSVA MGSGKCVEEFEALQQVLISEPKR
Sequences:
>Translated_343_residues MSSSLSFLGRDMAVDLGTANTLVYVRGRGIVLNEPSVVAINTTTSGILAVGTDAKRMIGRTPGNVVAVRPLKDGVIADFE TTERMLRYFIQKVHRRRHFAKPRLVVCVPSGITGVEQRAVKDAGYQAGARKVYIIEEPMAAAIGAGLPVHEPTGNMVVDI GGGTTEVAVISLGGIVTSQSIRTAGDELDTAIISYVKKEYSLMLGERTAEEIKMAIGSAHKIPDEPSAEIRGRDLVTGLP KTIVVTAEEIRKAIEEPVNAVIDAVKVTLDRCPPELSGDIMDRGIVLTGGGALLRGLDERLRHETGMPIHIAENPLHSVA MGSGKCVEEFEALQQVLISEPKR >Mature_342_residues SSSLSFLGRDMAVDLGTANTLVYVRGRGIVLNEPSVVAINTTTSGILAVGTDAKRMIGRTPGNVVAVRPLKDGVIADFET TERMLRYFIQKVHRRRHFAKPRLVVCVPSGITGVEQRAVKDAGYQAGARKVYIIEEPMAAAIGAGLPVHEPTGNMVVDIG GGTTEVAVISLGGIVTSQSIRTAGDELDTAIISYVKKEYSLMLGERTAEEIKMAIGSAHKIPDEPSAEIRGRDLVTGLPK TIVVTAEEIRKAIEEPVNAVIDAVKVTLDRCPPELSGDIMDRGIVLTGGGALLRGLDERLRHETGMPIHIAENPLHSVAM GSGKCVEEFEALQQVLISEPKR
Specific function: Involved in formation of the rod shape of the cell [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Homo sapiens, GI16507237, Length=295, Percent_Identity=26.1016949152542, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87082236, Length=339, Percent_Identity=55.7522123893805, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1786196, Length=250, Percent_Identity=27.6, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 36705; Mature: 36574
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLSFLGRDMAVDLGTANTLVYVRGRGIVLNEPSVVAINTTTSGILAVGTDAKRMIGR CCCCHHHHCCCCEEECCCCCEEEEEECCEEEECCCCEEEEECCCCCEEEECCCHHHHHCC TPGNVVAVRPLKDGVIADFETTERMLRYFIQKVHRRRHFAKPRLVVCVPSGITGVEQRAV CCCCEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH KDAGYQAGARKVYIIEEPMAAAIGAGLPVHEPTGNMVVDIGGGTTEVAVISLGGIVTSQS HHCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEECCH IRTAGDELDTAIISYVKKEYSLMLGERTAEEIKMAIGSAHKIPDEPSAEIRGRDLVTGLP HHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC KTIVVTAEEIRKAIEEPVNAVIDAVKVTLDRCPPELSGDIMDRGIVLTGGGALLRGLDER CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEECCHHHHHHHHHH LRHETGMPIHIAENPLHSVAMGSGKCVEEFEALQQVLISEPKR HHHHCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSSLSFLGRDMAVDLGTANTLVYVRGRGIVLNEPSVVAINTTTSGILAVGTDAKRMIGR CCCHHHHCCCCEEECCCCCEEEEEECCEEEECCCCEEEEECCCCCEEEECCCHHHHHCC TPGNVVAVRPLKDGVIADFETTERMLRYFIQKVHRRRHFAKPRLVVCVPSGITGVEQRAV CCCCEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH KDAGYQAGARKVYIIEEPMAAAIGAGLPVHEPTGNMVVDIGGGTTEVAVISLGGIVTSQS HHCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEECCH IRTAGDELDTAIISYVKKEYSLMLGERTAEEIKMAIGSAHKIPDEPSAEIRGRDLVTGLP HHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC KTIVVTAEEIRKAIEEPVNAVIDAVKVTLDRCPPELSGDIMDRGIVLTGGGALLRGLDER CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEECCHHHHHHHHHH LRHETGMPIHIAENPLHSVAMGSGKCVEEFEALQQVLISEPKR HHHHCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377; 8387996 [H]