Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158313693

Identifier: 158313693

GI number: 158313693

Start: 2230452

End: 2230811

Strand: Direct

Name: 158313693

Synonym: Franean1_1857

Alternate gene names: NA

Gene position: 2230452-2230811 (Clockwise)

Preceding gene: 158313690

Following gene: 158313694

Centisome position: 24.83

GC content: 74.72

Gene sequence:

>360_bases
GTGCTCGTGCACCAAGGAAGTGTTTTCAACCTGGCCCCGGCCCTGCCGGCGCCCACCACAGAGGCGGAGCCGTCCGGCGA
CCCCGCCTCCGCCTCCCCCGTCGCGCGGCGGAGGTGTCCGCACAGTCCGCCCTGCCCGACGGCCGACAGCGCCGACCACG
ACGCGGCGAGAGTCACCAGCAGACACTGCGACCAGGGCTGGAGTCTGCTCTGCAACGGGGTGATCCTCTTCGAGGACACG
GGGGAGATCCTGCCCACCGGTCGCACCGTGGAGCCGCGGCGACCGTTGCCGCGGCCCGGGTGCGTACCCCGGCCGCCCGC
GCCGCGTCGAGGGGCGGTCGCCGCGCCGACACCGGTCTGA

Upstream 100 bases:

>100_bases
ACGCCCACACCCGCCCCCGGCTGGCCGCGTACGGCGTGACACGCCGGTGGGCGCACGGGCGCCCCCGTGTGACGTGCCTA
ACGGAGAGGCGTAACCTCTG

Downstream 100 bases:

>100_bases
CTCGCCACGTCCCGCCGCCGCCGGCTGGGCGGTGCGGCGTGCCCCGGCACCGTCCGGCCCAGGCCGGGGTTCCGCCCTGG
CCCGGGCCGGCACCGGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLVHQGSVFNLAPALPAPTTEAEPSGDPASASPVARRRCPHSPPCPTADSADHDAARVTSRHCDQGWSLLCNGVILFEDT
GEILPTGRTVEPRRPLPRPGCVPRPPAPRRGAVAAPTPV

Sequences:

>Translated_119_residues
MLVHQGSVFNLAPALPAPTTEAEPSGDPASASPVARRRCPHSPPCPTADSADHDAARVTSRHCDQGWSLLCNGVILFEDT
GEILPTGRTVEPRRPLPRPGCVPRPPAPRRGAVAAPTPV
>Mature_119_residues
MLVHQGSVFNLAPALPAPTTEAEPSGDPASASPVARRRCPHSPPCPTADSADHDAARVTSRHCDQGWSLLCNGVILFEDT
GEILPTGRTVEPRRPLPRPGCVPRPPAPRRGAVAAPTPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12480; Mature: 12480

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHQGSVFNLAPALPAPTTEAEPSGDPASASPVARRRCPHSPPCPTADSADHDAARVTS
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHH
RHCDQGWSLLCNGVILFEDTGEILPTGRTVEPRRPLPRPGCVPRPPAPRRGAVAAPTPV
HHCCCCCCCHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLVHQGSVFNLAPALPAPTTEAEPSGDPASASPVARRRCPHSPPCPTADSADHDAARVTS
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHH
RHCDQGWSLLCNGVILFEDTGEILPTGRTVEPRRPLPRPGCVPRPPAPRRGAVAAPTPV
HHCCCCCCCHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA