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The map label for this gene is yhjK [C]

Identifier: 157963536

GI number: 157963536

Start: 4530343

End: 4532085

Strand: Direct

Name: yhjK [C]

Synonym: Spea_3724

Alternate gene names: 157963536

Gene position: 4530343-4532085 (Clockwise)

Preceding gene: 157963535

Following gene: 157963538

Centisome position: 87.55

GC content: 44.0

Gene sequence:

>1743_bases
ATGTCCGCAATCGATCTGCAACTAGAACTCTCAAAGATCATCGATAAAGAAAAAATCAAAGCGGTCTTTCAACCTATATG
TAATATCTCTACCCACCAAGTTCATGGTTTTGAAGCATTAAGCCGCGGACCTGAGCATAGTCCACTATTTTCACCTGTAC
CATTATTTAAAACGGCAGCTTACGAGGGACGTCTATCTGAGCTTGAGACCCTCTGTCGACGGATCTCCATTCAACAGTTT
AAAAACATCCAGCTGCCAGGCAAGCTATTCCTAAATATTTCACCTAAAGCGCTGTTAGAGCCTAATCATGCTAAAGGGCT
CACCCTCAGCCTAGTACAAGAGCTCGGGTTACATCCATCTCAGGTCGTTATTGAGCTATCGGAGCAATATCCTGCCGACG
ATATCGATCTACTCAAGTCCTGTCTCAACCACTACCGTAGCCAAGGATTTCTCACGGCGATCGATGACTTGGGAGCCGGA
TATTCCGGTTTAAGGCTCTGGTCAGAATTAGCACCAGATTATGTGAAGATTGATCGTCACTTTATCGAGTCGATAGATAG
CTCGTCAGTGAAGCAAGAGTTTGTTCGCTCTATCATCAATCTCTGTCAAAACCTCAGCTGCAAGGTGATAGCCGAAGGCA
TTGAGACTCAGGCAGAATTAGCCGTATTAAAACAGTTGGGAATTGTCTACTGCCAAGGCTTTCTACTCGGCCGCCCAAGC
GACTCTCCCAATCGCTGTATTCCATTTGAACCCACTTTAGAACCGACAGCACAAAAGGTACGATTTGCCGAATCGGCAGA
AAGCCTTTGCAGTCGAGCCACAACCAGCCAATTTGATCGTAAACTCAAGCAGATTGGCGAGACATTTAATCAGCAACCCA
AGCTTCAAGCCATAGTGGTAATGCGACAGGATCTGGTGATTGGATTGGTGTTAAGAAGTCAGGTTATAGAGCTGTTTAGC
ACCCCATATGGTCGAGCACTATATGAAAACAGAAGCGTAGAAGAAGTATTAACCACTGAGCTCATTCGAATTGACGCAGA
AATGCCGATATCTCAAGTTAGCCAGCGCCTAACCAAGGAGTCTACCGATCTTGTGGTGCAGCAATTTATTATTCTTAAAC
AAGGAAAGTTACTGGGGATCGGACACACCAAAGATCTTTTAGCTAAAATAACCGTTCAAAAAATTGCTATCGCGAGACAC
GCAAATCCGCTAACAGGGCTGCCTGGTAATATTCCTATTCAAGAAGAGCTACTGAGATTACGCCAACAAAAAAAGCCTTT
CTATTTGGCTTACTTTGACCTATCTCACTTTAAACCCTATAACGATATCTACGGATTCTGCCGCGGCGATGAAGTGATTA
TGGAGGTTGCTCGCCTACTCTTATGTCTGCAAACCAGTAATAACTTTATCGGCCATGTGGGGGGAGATGATTTTGTCATA
ATCAGTACTTGTGCCAATATTGAGCCCCAAGCAATGAAAATTATTGATGATTTCGACGCAACGAAGTCATCATTTTATTC
TAAGCAACATTGGCAAGATCAGAAGATGTTAGCTGAAGATAGAAATGGCCTGCAGTGCTACCACGACCTTATCTCGCTCA
GCGTGGGGATACTCCCGCCCTCAATCACCATCCACTGTAATGAACATCAACTATCACTCTATAGTGCACAGGCAAAAAAA
CAGGCCAAACAAGCAAAAAATGCATTTAGCCTATTTTCACTAGAGACAGCTATTAGCGCATAA

Upstream 100 bases:

>100_bases
AGTCAATATCAATCCGTTATCAACGGATTGATATCTGTCATCTAACTGTCATACCTGTGTCATACACTTTGCTACCTAAC
ACAATACCGGGTAGGAAAGG

Downstream 100 bases:

>100_bases
ACCACAATAGGCTTAATGCGCTAATAGAACTTAACTCACTGACTCATGGAGAGCCAACCTTAGCTACAGATTGGGCTTAA
CAGTTTTTTTAAGCCAAGAT

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MSAIDLQLELSKIIDKEKIKAVFQPICNISTHQVHGFEALSRGPEHSPLFSPVPLFKTAAYEGRLSELETLCRRISIQQF
KNIQLPGKLFLNISPKALLEPNHAKGLTLSLVQELGLHPSQVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAG
YSGLRLWSELAPDYVKIDRHFIESIDSSSVKQEFVRSIINLCQNLSCKVIAEGIETQAELAVLKQLGIVYCQGFLLGRPS
DSPNRCIPFEPTLEPTAQKVRFAESAESLCSRATTSQFDRKLKQIGETFNQQPKLQAIVVMRQDLVIGLVLRSQVIELFS
TPYGRALYENRSVEEVLTTELIRIDAEMPISQVSQRLTKESTDLVVQQFIILKQGKLLGIGHTKDLLAKITVQKIAIARH
ANPLTGLPGNIPIQEELLRLRQQKKPFYLAYFDLSHFKPYNDIYGFCRGDEVIMEVARLLLCLQTSNNFIGHVGGDDFVI
ISTCANIEPQAMKIIDDFDATKSSFYSKQHWQDQKMLAEDRNGLQCYHDLISLSVGILPPSITIHCNEHQLSLYSAQAKK
QAKQAKNAFSLFSLETAISA

Sequences:

>Translated_580_residues
MSAIDLQLELSKIIDKEKIKAVFQPICNISTHQVHGFEALSRGPEHSPLFSPVPLFKTAAYEGRLSELETLCRRISIQQF
KNIQLPGKLFLNISPKALLEPNHAKGLTLSLVQELGLHPSQVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAG
YSGLRLWSELAPDYVKIDRHFIESIDSSSVKQEFVRSIINLCQNLSCKVIAEGIETQAELAVLKQLGIVYCQGFLLGRPS
DSPNRCIPFEPTLEPTAQKVRFAESAESLCSRATTSQFDRKLKQIGETFNQQPKLQAIVVMRQDLVIGLVLRSQVIELFS
TPYGRALYENRSVEEVLTTELIRIDAEMPISQVSQRLTKESTDLVVQQFIILKQGKLLGIGHTKDLLAKITVQKIAIARH
ANPLTGLPGNIPIQEELLRLRQQKKPFYLAYFDLSHFKPYNDIYGFCRGDEVIMEVARLLLCLQTSNNFIGHVGGDDFVI
ISTCANIEPQAMKIIDDFDATKSSFYSKQHWQDQKMLAEDRNGLQCYHDLISLSVGILPPSITIHCNEHQLSLYSAQAKK
QAKQAKNAFSLFSLETAISA
>Mature_579_residues
SAIDLQLELSKIIDKEKIKAVFQPICNISTHQVHGFEALSRGPEHSPLFSPVPLFKTAAYEGRLSELETLCRRISIQQFK
NIQLPGKLFLNISPKALLEPNHAKGLTLSLVQELGLHPSQVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAGY
SGLRLWSELAPDYVKIDRHFIESIDSSSVKQEFVRSIINLCQNLSCKVIAEGIETQAELAVLKQLGIVYCQGFLLGRPSD
SPNRCIPFEPTLEPTAQKVRFAESAESLCSRATTSQFDRKLKQIGETFNQQPKLQAIVVMRQDLVIGLVLRSQVIELFST
PYGRALYENRSVEEVLTTELIRIDAEMPISQVSQRLTKESTDLVVQQFIILKQGKLLGIGHTKDLLAKITVQKIAIARHA
NPLTGLPGNIPIQEELLRLRQQKKPFYLAYFDLSHFKPYNDIYGFCRGDEVIMEVARLLLCLQTSNNFIGHVGGDDFVII
STCANIEPQAMKIIDDFDATKSSFYSKQHWQDQKMLAEDRNGLQCYHDLISLSVGILPPSITIHCNEHQLSLYSAQAKKQ
AKQAKNAFSLFSLETAISA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=175, Percent_Identity=34.8571428571429, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1790496, Length=239, Percent_Identity=27.1966527196653, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1787055, Length=225, Percent_Identity=29.7777777777778, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI87081845, Length=236, Percent_Identity=27.5423728813559, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI87082096, Length=149, Percent_Identity=34.2281879194631, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787410, Length=217, Percent_Identity=26.7281105990783, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI87081921, Length=240, Percent_Identity=25.8333333333333, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1787541, Length=241, Percent_Identity=29.045643153527, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788502, Length=243, Percent_Identity=27.1604938271605, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081743, Length=234, Percent_Identity=28.6324786324786, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786507, Length=240, Percent_Identity=25.4166666666667, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788849, Length=234, Percent_Identity=26.0683760683761, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI87081980, Length=222, Percent_Identity=27.4774774774775, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 65053; Mature: 64922

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIDLQLELSKIIDKEKIKAVFQPICNISTHQVHGFEALSRGPEHSPLFSPVPLFKTAA
CCCEEHEEHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHH
YEGRLSELETLCRRISIQQFKNIQLPGKLFLNISPKALLEPNHAKGLTLSLVQELGLHPS
HCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHCCCHH
QVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAGYSGLRLWSELAPDYVKIDRH
HHHEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHCCHHHHHHHH
FIESIDSSSVKQEFVRSIINLCQNLSCKVIAEGIETQAELAVLKQLGIVYCQGFLLGRPS
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
DSPNRCIPFEPTLEPTAQKVRFAESAESLCSRATTSQFDRKLKQIGETFNQQPKLQAIVV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MRQDLVIGLVLRSQVIELFSTPYGRALYENRSVEEVLTTELIRIDAEMPISQVSQRLTKE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
STDLVVQQFIILKQGKLLGIGHTKDLLAKITVQKIAIARHANPLTGLPGNIPIQEELLRL
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RQQKKPFYLAYFDLSHFKPYNDIYGFCRGDEVIMEVARLLLCLQTSNNFIGHVGGDDFVI
HHHCCCEEEEEEEHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEE
ISTCANIEPQAMKIIDDFDATKSSFYSKQHWQDQKMLAEDRNGLQCYHDLISLSVGILPP
EEECCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCC
SITIHCNEHQLSLYSAQAKKQAKQAKNAFSLFSLETAISA
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAIDLQLELSKIIDKEKIKAVFQPICNISTHQVHGFEALSRGPEHSPLFSPVPLFKTAA
CCEEHEEHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHH
YEGRLSELETLCRRISIQQFKNIQLPGKLFLNISPKALLEPNHAKGLTLSLVQELGLHPS
HCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHCCCHH
QVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAGYSGLRLWSELAPDYVKIDRH
HHHEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHCCHHHHHHHH
FIESIDSSSVKQEFVRSIINLCQNLSCKVIAEGIETQAELAVLKQLGIVYCQGFLLGRPS
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
DSPNRCIPFEPTLEPTAQKVRFAESAESLCSRATTSQFDRKLKQIGETFNQQPKLQAIVV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MRQDLVIGLVLRSQVIELFSTPYGRALYENRSVEEVLTTELIRIDAEMPISQVSQRLTKE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
STDLVVQQFIILKQGKLLGIGHTKDLLAKITVQKIAIARHANPLTGLPGNIPIQEELLRL
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RQQKKPFYLAYFDLSHFKPYNDIYGFCRGDEVIMEVARLLLCLQTSNNFIGHVGGDDFVI
HHHCCCEEEEEEEHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEE
ISTCANIEPQAMKIIDDFDATKSSFYSKQHWQDQKMLAEDRNGLQCYHDLISLSVGILPP
EEECCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCC
SITIHCNEHQLSLYSAQAKKQAKQAKNAFSLFSLETAISA
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]