| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963437
Identifier: 157963437
GI number: 157963437
Start: 4414420
End: 4414641
Strand: Direct
Name: 157963437
Synonym: Spea_3625
Alternate gene names: NA
Gene position: 4414420-4414641 (Clockwise)
Preceding gene: 157963434
Following gene: 157963442
Centisome position: 85.31
GC content: 40.54
Gene sequence:
>222_bases ATGCCGATGGAAGCTATGAACCTTAACCTTAAAGTTATTAACGAAGTCAAAAATAACGGCCGTCTATTATCTGACGTAGC CAAAGATTATGGCCTGTCGACTAAAACCGTTTATCAGATTGTTCAAGAGAGTGAGCAGAGAAGCAATAGAGGCTCACTTC CTATTCTAAAACAGACTAAACAACTGAGCTTACGCATTAAACAGCTGCTTAGTCGTCGCTAG
Upstream 100 bases:
>100_bases CACGACAGGGCCAAGTTTTAACGCCTTGCCAAGGGAACTCCGTCACCACGCTCAAAGACGTACAAACCACTGATGTCTAG CCATAGAGTTTATAAAGAGA
Downstream 100 bases:
>100_bases ATTTAACAGGCTGTACCCTGTTAAGCAGAGGCGGAAAACACTATTTTCGCCTTAACGAAATCAAAAAATTAATGCGCTAA CTCTATACAAATAAAATACG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPMEAMNLNLKVINEVKNNGRLLSDVAKDYGLSTKTVYQIVQESEQRSNRGSLPILKQTKQLSLRIKQLLSRR
Sequences:
>Translated_73_residues MPMEAMNLNLKVINEVKNNGRLLSDVAKDYGLSTKTVYQIVQESEQRSNRGSLPILKQTKQLSLRIKQLLSRR >Mature_72_residues PMEAMNLNLKVINEVKNNGRLLSDVAKDYGLSTKTVYQIVQESEQRSNRGSLPILKQTKQLSLRIKQLLSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8386; Mature: 8255
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMEAMNLNLKVINEVKNNGRLLSDVAKDYGLSTKTVYQIVQESEQRSNRGSLPILKQTK CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH QLSLRIKQLLSRR HHHHHHHHHHHCC >Mature Secondary Structure PMEAMNLNLKVINEVKNNGRLLSDVAKDYGLSTKTVYQIVQESEQRSNRGSLPILKQTK CCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH QLSLRIKQLLSRR HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA