| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is lptB [H]
Identifier: 157963429
GI number: 157963429
Start: 4406270
End: 4407001
Strand: Direct
Name: lptB [H]
Synonym: Spea_3615
Alternate gene names: 157963429
Gene position: 4406270-4407001 (Clockwise)
Preceding gene: 157963428
Following gene: 157963430
Centisome position: 85.15
GC content: 47.54
Gene sequence:
>732_bases ATGACCCAAATTACCTTAAAAGCGGCTAATCTTGCTAAAAGCTATAAAAACCGTGCCGTCGTACAAGATGTCAGTCTCAC CGTAAAAACGGGGCAAATTGTGGGCCTACTCGGCCCTAACGGGGCCGGCAAAACAACAACCTTCTACATGGTGGTCGGCC TAGTACAGAGCGATAAAGGCAAGATCTTTATCGATGACGATGATCTCACCCTAGATCCTATGCACCTGCGTGCTCGTAAA GGGATTGGCTATCTGCCCCAAGAAGCCAGCATTTTTAGAAAGCTTTCGGTGCGTGACAATATCATGGCAGTGTTACAGAC CCGCCATGATATCAATAACGAGCAACGTGAAGAGCAGCTCGAACATTTACTCGAAGAGTTCCACATCACTCACATTCGCG ATAGCCAAGGCATGGCATTATCGGGCGGTGAACGACGTCGAGTAGAAATTGCCCGAGCATTGGCCGCTAATCCAAAGTTT ATTTTATTGGATGAGCCATTTGCCGGTGTCGACCCAATTTCAGTTATCGATATCAAAAAGATTATTGAGCAACTCAAAAG CCGCGGCCTAGGTGTACTGATCACTGACCACAATGTTCGAGAAACCTTGGACGTTTGTGAACACGCTTACATCGTGAGTC ACGGAAACCTCATTGCCGAAGGCACACCTGCCGAAATCTTGGACAACCAACAGGTTCGAGCAGTGTACTTAGGTGAGCAA TTCAGGCTATAG
Upstream 100 bases:
>100_bases AAAGTACTGGCAAGGGCGATGACAGAGTCATCACCATTATTCAGCCTGAAACCTACCAGGAAGAGAAGCCTGACACGCCA GTGAACAAGCAGGAACAGCA
Downstream 100 bases:
>100_bases TTAATTCATAGTATGGAAGCTGAAAAACTCAATATGGATTTACTTCCAAATAAAATCAAAGTGTTGAGTTTTCAAGCTAC CTTCGCCAGTTCAGCGAGCT
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTQITLKAANLAKSYKNRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKGKIFIDDDDLTLDPMHLRARK GIGYLPQEASIFRKLSVRDNIMAVLQTRHDINNEQREEQLEHLLEEFHITHIRDSQGMALSGGERRRVEIARALAANPKF ILLDEPFAGVDPISVIDIKKIIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ FRL
Sequences:
>Translated_243_residues MTQITLKAANLAKSYKNRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKGKIFIDDDDLTLDPMHLRARK GIGYLPQEASIFRKLSVRDNIMAVLQTRHDINNEQREEQLEHLLEEFHITHIRDSQGMALSGGERRRVEIARALAANPKF ILLDEPFAGVDPISVIDIKKIIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ FRL >Mature_242_residues TQITLKAANLAKSYKNRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKGKIFIDDDDLTLDPMHLRARKG IGYLPQEASIFRKLSVRDNIMAVLQTRHDINNEQREEQLEHLLEEFHITHIRDSQGMALSGGERRRVEIARALAANPKFI LLDEPFAGVDPISVIDIKKIIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQF RL
Specific function: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system [H]
COG id: COG1137
COG function: function code R; ABC-type (unclassified) transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=222, Percent_Identity=31.5315315315315, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI47078218, Length=222, Percent_Identity=31.5315315315315, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI31657092, Length=217, Percent_Identity=32.7188940092166, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI105990541, Length=232, Percent_Identity=30.1724137931034, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI153792144, Length=208, Percent_Identity=28.3653846153846, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI116734710, Length=221, Percent_Identity=31.6742081447964, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI27881501, Length=217, Percent_Identity=30.4147465437788, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI30795238, Length=217, Percent_Identity=30.4147465437788, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI11967969, Length=224, Percent_Identity=32.1428571428571, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI150417984, Length=219, Percent_Identity=28.310502283105, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI21536376, Length=232, Percent_Identity=30.1724137931034, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI27262624, Length=222, Percent_Identity=29.2792792792793, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI27262626, Length=222, Percent_Identity=29.2792792792793, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI46592964, Length=212, Percent_Identity=26.8867924528302, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592915, Length=212, Percent_Identity=26.8867924528302, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592956, Length=212, Percent_Identity=26.8867924528302, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592898, Length=212, Percent_Identity=26.8867924528302, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592978, Length=212, Percent_Identity=26.8867924528302, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592971, Length=212, Percent_Identity=26.8867924528302, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI171184400, Length=236, Percent_Identity=27.9661016949153, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI27477115, Length=221, Percent_Identity=27.1493212669683, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI27436953, Length=208, Percent_Identity=27.8846153846154, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI255708477, Length=234, Percent_Identity=28.2051282051282, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI215820660, Length=193, Percent_Identity=27.979274611399, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI20143975, Length=193, Percent_Identity=27.979274611399, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI6005701, Length=208, Percent_Identity=27.4038461538462, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI156105685, Length=228, Percent_Identity=28.5087719298246, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI11967971, Length=191, Percent_Identity=27.2251308900524, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI9961252, Length=232, Percent_Identity=27.1551724137931, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI4505771, Length=232, Percent_Identity=27.1551724137931, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI9961250, Length=232, Percent_Identity=27.1551724137931, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI90421313, Length=216, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI9955963, Length=171, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI89111135, Length=240, Percent_Identity=28.3333333333333, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI73747915, Length=206, Percent_Identity=26.2135922330097, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI9955966, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI45243524, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI9955968, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21536378, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI73747917, Length=176, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI42741659, Length=221, Percent_Identity=26.6968325791855, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI148612844, Length=225, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4557481, Length=171, Percent_Identity=27.4853801169591, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI157502203, Length=218, Percent_Identity=27.9816513761468, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI157502201, Length=218, Percent_Identity=27.9816513761468, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI190343023, Length=219, Percent_Identity=27.3972602739726, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI62526033, Length=221, Percent_Identity=22.6244343891403, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=75.7322175732218, Blast_Score=356, Evalue=1e-100, Organism=Escherichia coli, GI1788761, Length=247, Percent_Identity=33.1983805668016, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI87082268, Length=240, Percent_Identity=31.25, Blast_Score=130, Evalue=5e-32, Organism=Escherichia coli, GI1789864, Length=254, Percent_Identity=29.1338582677165, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87081782, Length=224, Percent_Identity=31.25, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=31.4893617021277, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1790739, Length=239, Percent_Identity=28.4518828451883, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788450, Length=224, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI48994943, Length=240, Percent_Identity=27.5, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=31.1688311688312, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786319, Length=216, Percent_Identity=30.5555555555556, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=28.3185840707965, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789672, Length=236, Percent_Identity=28.8135593220339, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788225, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1789586, Length=223, Percent_Identity=30.9417040358744, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1790544, Length=256, Percent_Identity=30.46875, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1786345, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1789032, Length=225, Percent_Identity=29.7777777777778, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788165, Length=218, Percent_Identity=32.5688073394495, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786563, Length=211, Percent_Identity=30.3317535545024, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1786253, Length=215, Percent_Identity=28.8372093023256, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=27.8969957081545, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI48995001, Length=222, Percent_Identity=29.2792792792793, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=26.457399103139, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1787370, Length=228, Percent_Identity=27.6315789473684, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787712, Length=222, Percent_Identity=27.4774774774775, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787792, Length=231, Percent_Identity=25.974025974026, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1790162, Length=225, Percent_Identity=28.8888888888889, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=25.1063829787234, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI87082267, Length=227, Percent_Identity=26.431718061674, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1790190, Length=230, Percent_Identity=24.3478260869565, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788897, Length=216, Percent_Identity=27.3148148148148, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787112, Length=230, Percent_Identity=29.1304347826087, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=25.9259259259259, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787089, Length=212, Percent_Identity=27.8301886792453, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=29.3103448275862, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788210, Length=215, Percent_Identity=30.6976744186047, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788053, Length=155, Percent_Identity=33.5483870967742, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788506, Length=230, Percent_Identity=27.3913043478261, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788644, Length=244, Percent_Identity=27.0491803278689, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1790525, Length=239, Percent_Identity=26.3598326359833, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=28.6384976525822, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789991, Length=209, Percent_Identity=28.7081339712919, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87081834, Length=209, Percent_Identity=27.7511961722488, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787759, Length=249, Percent_Identity=26.1044176706827, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787547, Length=243, Percent_Identity=24.6913580246914, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI145693107, Length=238, Percent_Identity=26.0504201680672, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787500, Length=221, Percent_Identity=26.2443438914027, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787105, Length=183, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367384, Length=167, Percent_Identity=29.940119760479, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787164, Length=210, Percent_Identity=25.2380952380952, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789873, Length=201, Percent_Identity=26.3681592039801, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786698, Length=185, Percent_Identity=25.9459459459459, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1787143, Length=244, Percent_Identity=25.4098360655738, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=24.1071428571429, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI48994997, Length=240, Percent_Identity=25.4166666666667, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI48994883, Length=214, Percent_Identity=23.8317757009346, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786975, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1790534, Length=191, Percent_Identity=28.2722513089005, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786703, Length=162, Percent_Identity=29.0123456790123, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1786653, Length=217, Percent_Identity=28.110599078341, Blast_Score=63, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533608, Length=214, Percent_Identity=35.0467289719626, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17510237, Length=218, Percent_Identity=32.1100917431193, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=31.1627906976744, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=31.1627906976744, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=31.1627906976744, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17565586, Length=218, Percent_Identity=32.1100917431193, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71992285, Length=259, Percent_Identity=28.957528957529, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17541710, Length=235, Percent_Identity=28.5106382978723, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17558664, Length=221, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI115534520, Length=235, Percent_Identity=27.6595744680851, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17533971, Length=223, Percent_Identity=26.457399103139, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17569145, Length=238, Percent_Identity=28.9915966386555, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI25146777, Length=217, Percent_Identity=28.110599078341, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI86563255, Length=222, Percent_Identity=26.5765765765766, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI115533592, Length=233, Percent_Identity=27.8969957081545, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17569081, Length=220, Percent_Identity=28.1818181818182, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193202349, Length=227, Percent_Identity=28.1938325991189, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17569143, Length=237, Percent_Identity=30.8016877637131, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193211015, Length=235, Percent_Identity=28.936170212766, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71996809, Length=235, Percent_Identity=28.936170212766, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193211017, Length=235, Percent_Identity=28.936170212766, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17565938, Length=223, Percent_Identity=26.0089686098655, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71988343, Length=232, Percent_Identity=26.7241379310345, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71984940, Length=221, Percent_Identity=30.316742081448, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193208177, Length=235, Percent_Identity=25.531914893617, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI212646699, Length=248, Percent_Identity=24.5967741935484, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193209708, Length=220, Percent_Identity=26.8181818181818, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17552232, Length=222, Percent_Identity=27.027027027027, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17567265, Length=235, Percent_Identity=28.5106382978723, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17543740, Length=226, Percent_Identity=24.3362831858407, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI86564969, Length=221, Percent_Identity=28.0542986425339, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992070, Length=221, Percent_Identity=28.0542986425339, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992066, Length=221, Percent_Identity=28.0542986425339, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25146765, Length=221, Percent_Identity=28.0542986425339, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17556528, Length=230, Percent_Identity=26.5217391304348, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17551700, Length=263, Percent_Identity=26.2357414448669, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17551702, Length=263, Percent_Identity=26.2357414448669, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71996550, Length=242, Percent_Identity=23.5537190082645, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI115535101, Length=173, Percent_Identity=30.0578034682081, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17567269, Length=173, Percent_Identity=30.0578034682081, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17538654, Length=194, Percent_Identity=25.2577319587629, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992290, Length=168, Percent_Identity=27.3809523809524, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=233, Percent_Identity=23.6051502145923, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324985, Length=231, Percent_Identity=26.8398268398268, Blast_Score=76, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6324904, Length=192, Percent_Identity=28.6458333333333, Blast_Score=75, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6323217, Length=246, Percent_Identity=24.390243902439, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325199, Length=193, Percent_Identity=27.4611398963731, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=239, Percent_Identity=25.1046025104602, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320614, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321752, Length=233, Percent_Identity=27.8969957081545, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323959, Length=167, Percent_Identity=26.3473053892216, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=224, Percent_Identity=26.3392857142857, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6319856, Length=191, Percent_Identity=26.7015706806283, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324727, Length=189, Percent_Identity=25.3968253968254, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=209, Percent_Identity=28.7081339712919, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24666092, Length=206, Percent_Identity=35.9223300970874, Blast_Score=123, Evalue=9e-29, Organism=Drosophila melanogaster, GI116007328, Length=218, Percent_Identity=32.1100917431193, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI28574150, Length=218, Percent_Identity=32.1100917431193, Blast_Score=113, Evalue=9e-26, Organism=Drosophila melanogaster, GI221512771, Length=236, Percent_Identity=29.6610169491525, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI116007184, Length=224, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI221500365, Length=219, Percent_Identity=29.2237442922374, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI24581191, Length=219, Percent_Identity=27.8538812785388, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24581189, Length=219, Percent_Identity=27.8538812785388, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24581193, Length=219, Percent_Identity=27.8538812785388, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24581195, Length=219, Percent_Identity=27.8538812785388, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24648314, Length=220, Percent_Identity=28.1818181818182, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=31.4553990610329, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI28573571, Length=213, Percent_Identity=29.5774647887324, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI28573573, Length=213, Percent_Identity=29.5774647887324, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI85725262, Length=226, Percent_Identity=30.9734513274336, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24650855, Length=233, Percent_Identity=29.1845493562232, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI24650853, Length=233, Percent_Identity=29.1845493562232, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI281362751, Length=237, Percent_Identity=28.6919831223629, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI23397593, Length=225, Percent_Identity=28.8888888888889, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24581407, Length=189, Percent_Identity=31.7460317460317, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI45552199, Length=189, Percent_Identity=31.7460317460317, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24659289, Length=232, Percent_Identity=28.448275862069, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24662800, Length=218, Percent_Identity=25.2293577981651, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI161076682, Length=208, Percent_Identity=26.4423076923077, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24582014, Length=223, Percent_Identity=26.9058295964126, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24582012, Length=223, Percent_Identity=26.9058295964126, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI161076684, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24581617, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24581615, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI28574533, Length=219, Percent_Identity=25.1141552511416, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641565, Length=179, Percent_Identity=30.7262569832402, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI85724858, Length=220, Percent_Identity=25.9090909090909, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI85724856, Length=220, Percent_Identity=25.9090909090909, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24580547, Length=220, Percent_Identity=25.9090909090909, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24580551, Length=220, Percent_Identity=25.9090909090909, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24580549, Length=220, Percent_Identity=25.9090909090909, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24580545, Length=220, Percent_Identity=25.9090909090909, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI28574744, Length=216, Percent_Identity=25.462962962963, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI85726357, Length=218, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI85724864, Length=214, Percent_Identity=21.9626168224299, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24580555, Length=214, Percent_Identity=21.9626168224299, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85816269, Length=214, Percent_Identity=21.9626168224299, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24580553, Length=214, Percent_Identity=21.9626168224299, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI19920532, Length=232, Percent_Identity=23.2758620689655, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580930, Length=232, Percent_Identity=23.2758620689655, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581409, Length=155, Percent_Identity=32.9032258064516, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28571209, Length=238, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24650986, Length=225, Percent_Identity=27.1111111111111, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI21358185, Length=225, Percent_Identity=27.1111111111111, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI17136592, Length=223, Percent_Identity=22.4215246636771, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21357907, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552437, Length=219, Percent_Identity=28.7671232876712, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281363262, Length=217, Percent_Identity=27.1889400921659, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24585557, Length=219, Percent_Identity=28.7671232876712, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24653245, Length=217, Percent_Identity=27.1889400921659, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24585091, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI17136662, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552345, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552359, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45550972, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552363, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552347, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552335, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552343, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24583969, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552361, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45552357, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552349, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552353, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552341, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552339, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552337, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552351, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI221474134, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45552355, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI161077321, Length=214, Percent_Identity=26.6355140186916, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI17647219, Length=174, Percent_Identity=25.8620689655172, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI45552805, Length=184, Percent_Identity=25, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24649703, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI17647959, Length=240, Percent_Identity=25.8333333333333, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221460257, Length=216, Percent_Identity=26.8518518518519, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27087; Mature: 26955
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQITLKAANLAKSYKNRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKG CCEEEEEHHHHHHHHHCCEEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECCCC KIFIDDDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQTRHDINNEQREEQL EEEECCCCCEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EHLLEEFHITHIRDSQGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKK HHHHHHHCEEEEECCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH IIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ HHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEECCCEEECCCCHHHHCCCCEEEEEECCC FRL CCC >Mature Secondary Structure TQITLKAANLAKSYKNRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKG CEEEEEHHHHHHHHHCCEEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECCCC KIFIDDDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQTRHDINNEQREEQL EEEECCCCCEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EHLLEEFHITHIRDSQGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKK HHHHHHHCEEEEECCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH IIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ HHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEECCCEEECCCCHHHHCCCCEEEEEECCC FRL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]