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The map label for this gene is trg [C]

Identifier: 157963306

GI number: 157963306

Start: 4268076

End: 4269956

Strand: Direct

Name: trg [C]

Synonym: Spea_3492

Alternate gene names: 157963306

Gene position: 4268076-4269956 (Clockwise)

Preceding gene: 157963305

Following gene: 157963311

Centisome position: 82.48

GC content: 46.84

Gene sequence:

>1881_bases
ATGAACCTTACAATTAAGCAAAAGATACAGCTCGCTGTCTTGCTGGTTATCGTGACGATAACAGCAGTTCTAGCCCTAAT
CTCAACTAAGCAACTAAACCAACATACCGAACACGCTATCGCGACTCGCTTTGCACTTCAAGGTGAAGCAGTCAGTAACA
ATATTTTTAGCTGGTTAGCAGACAAAAAGCGCATTATCAGCGCCAATGAAGCTCCACTTCAAAATGGCTTAGATAATGCC
AAGGAACTCGAACTCAGCATCCGGGCTGGCGGCTTTATCAACCTGTATATGGGCTTAGATAATGGCAAAGTGATCTCTGG
TGACAAGAGCGTTGAGATCCCTGCAGATTTTGACGGTAGAACCCGGCCTTGGTACCGAGATGCATTCAATAGTCATGAGA
TCATCACCACCTTGCCTTATGTGGATATCTCTGGCGATACCGTAGTGACCTTAGCTAAGCGTTTTAACGGGCAGTTTTCT
GGTGTATTAGCGGCAGATTTGAGCATTAGCTATATCACGCAGCAGATCGACAACCTAAATATTGCCAACTCAGGTTTTGC
TTTCCTACTCGATGAAAACAATAACATCCTAGCCTTTAGAGATAGAAGCTATGCTCAGCAAGACGCCAAGCGTTTATCAC
AACAACTGACTCAGTCAAATATTCAAACCCTGCGTAATAGCGGCGAAATTAGCACCATAGAGTGGCAAGATGGTCAGGAT
AAGCTAATCAGTTTAACGCAGCTTAAGGGGACAAACTGGACCTTAGGCTTAGTCGAAGACAAGAATCTTGCCTATCAGGC
GATAGAACAGCAGATCCAACAGTCTCTATTTGCAGTAACAATATTGGCCATCATCATATTGCTGATTGCTTCTGTCGCCG
TAAACTATCTGTTTAAGCCACTGCAACAACTTAGCCTTGCTATTGAAGCCCTATCGAAAGGCGATGGTGACTTAACCCAA
CGCTTTGCGGCAAATAGAGAAGATGAAATTGGTCAGTTAGAACGCCATATGAACCGCTTCCTAGCGAGTCTACAGCAGAT
GATTAAGGCGATATCAAATGATACCGAGCAGTTGATCAAGCAGATCCATGAGTCTTCAGACATAGCAGCCAAAGCCAGTG
ACGGCGTGAATGGCCAGCACCAAGATGTGGATCAGATAGCCACTGCTATCCATGAGATGTCGGCAACCGCGAGCGAAGTG
GCCAATCATGCCGAAATGACTGCCAATGCTGCGCAAGTATCAACCCAAGCCTGTATCGAAGGCAATGACGTTATTATTAA
GAGCAGCGACTCTATCGAGCTGTTGTCAGAGCAACTTGGTGATGCCTCGAAAGTGGTTTCTGCACTCGAAGAGAACGCCA
CCGAGATCAATAAGATCTTATCGACGATTCAAGCCATTGCCGAGCAGACAAACTTACTGGCACTTAACGCAGCTATTGAA
GCTGCCCGAGCCGGTGAGCAGGGACGAGGCTTTGCCGTAGTGGCCGATGAAGTACGAGTGCTGAGTCATCGTACTCAAGA
CTCTACCGAAGAGATCCGTGCGATGATCACCACCTTGCAGCAAAATAGCCAACAAGCGGTAGCATCTATGGCATCGAGTA
CTGATATTGCCCACAGCAGTGTCGAGTTCGCTAACCAAGCTAAGCAGAGCTTAGAGAGTATTACCGATTCAATCACCGAG
ATCTCCGATATGGCGACCCAAATCGCCAGTGCAGCAGAGGAGCAGCGCGCCGTTTCAGAGGACATTAGCCGTAATACTCA
AGCGATTAGCGATACATCCCATCAACTGTCATCTCAAACCCAAGAGGTGACCGACAATGCGGTGCAGATGCTACAGACCT
CGAGTAGCTTAAGTGAACGGGTTTCTCGTTTTAAGATCTAA

Upstream 100 bases:

>100_bases
TCATCGATTATAATCCGCCCACTCTCAACAAGACCTAGCAGGTACTGACAAGCTTTAGCCGCTCTTGATTAAATGACTCG
TCGGTCAATATTATAAACAT

Downstream 100 bases:

>100_bases
ACGAACTGCTAGCATTAGTCATAAAAAGCCCTGAACATTCAGGGCTTTTTACTCTCTATTGATTAACTAGACTAAACGCT
GGTACAGGCTCGCGTAATAG

Product: Cache sensor containing methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MNLTIKQKIQLAVLLVIVTITAVLALISTKQLNQHTEHAIATRFALQGEAVSNNIFSWLADKKRIISANEAPLQNGLDNA
KELELSIRAGGFINLYMGLDNGKVISGDKSVEIPADFDGRTRPWYRDAFNSHEIITTLPYVDISGDTVVTLAKRFNGQFS
GVLAADLSISYITQQIDNLNIANSGFAFLLDENNNILAFRDRSYAQQDAKRLSQQLTQSNIQTLRNSGEISTIEWQDGQD
KLISLTQLKGTNWTLGLVEDKNLAYQAIEQQIQQSLFAVTILAIIILLIASVAVNYLFKPLQQLSLAIEALSKGDGDLTQ
RFAANREDEIGQLERHMNRFLASLQQMIKAISNDTEQLIKQIHESSDIAAKASDGVNGQHQDVDQIATAIHEMSATASEV
ANHAEMTANAAQVSTQACIEGNDVIIKSSDSIELLSEQLGDASKVVSALEENATEINKILSTIQAIAEQTNLLALNAAIE
AARAGEQGRGFAVVADEVRVLSHRTQDSTEEIRAMITTLQQNSQQAVASMASSTDIAHSSVEFANQAKQSLESITDSITE
ISDMATQIASAAEEQRAVSEDISRNTQAISDTSHQLSSQTQEVTDNAVQMLQTSSSLSERVSRFKI

Sequences:

>Translated_626_residues
MNLTIKQKIQLAVLLVIVTITAVLALISTKQLNQHTEHAIATRFALQGEAVSNNIFSWLADKKRIISANEAPLQNGLDNA
KELELSIRAGGFINLYMGLDNGKVISGDKSVEIPADFDGRTRPWYRDAFNSHEIITTLPYVDISGDTVVTLAKRFNGQFS
GVLAADLSISYITQQIDNLNIANSGFAFLLDENNNILAFRDRSYAQQDAKRLSQQLTQSNIQTLRNSGEISTIEWQDGQD
KLISLTQLKGTNWTLGLVEDKNLAYQAIEQQIQQSLFAVTILAIIILLIASVAVNYLFKPLQQLSLAIEALSKGDGDLTQ
RFAANREDEIGQLERHMNRFLASLQQMIKAISNDTEQLIKQIHESSDIAAKASDGVNGQHQDVDQIATAIHEMSATASEV
ANHAEMTANAAQVSTQACIEGNDVIIKSSDSIELLSEQLGDASKVVSALEENATEINKILSTIQAIAEQTNLLALNAAIE
AARAGEQGRGFAVVADEVRVLSHRTQDSTEEIRAMITTLQQNSQQAVASMASSTDIAHSSVEFANQAKQSLESITDSITE
ISDMATQIASAAEEQRAVSEDISRNTQAISDTSHQLSSQTQEVTDNAVQMLQTSSSLSERVSRFKI
>Mature_626_residues
MNLTIKQKIQLAVLLVIVTITAVLALISTKQLNQHTEHAIATRFALQGEAVSNNIFSWLADKKRIISANEAPLQNGLDNA
KELELSIRAGGFINLYMGLDNGKVISGDKSVEIPADFDGRTRPWYRDAFNSHEIITTLPYVDISGDTVVTLAKRFNGQFS
GVLAADLSISYITQQIDNLNIANSGFAFLLDENNNILAFRDRSYAQQDAKRLSQQLTQSNIQTLRNSGEISTIEWQDGQD
KLISLTQLKGTNWTLGLVEDKNLAYQAIEQQIQQSLFAVTILAIIILLIASVAVNYLFKPLQQLSLAIEALSKGDGDLTQ
RFAANREDEIGQLERHMNRFLASLQQMIKAISNDTEQLIKQIHESSDIAAKASDGVNGQHQDVDQIATAIHEMSATASEV
ANHAEMTANAAQVSTQACIEGNDVIIKSSDSIELLSEQLGDASKVVSALEENATEINKILSTIQAIAEQTNLLALNAAIE
AARAGEQGRGFAVVADEVRVLSHRTQDSTEEIRAMITTLQQNSQQAVASMASSTDIAHSSVEFANQAKQSLESITDSITE
ISDMATQIASAAEEQRAVSEDISRNTQAISDTSHQLSSQTQEVTDNAVQMLQTSSSLSERVSRFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=355, Percent_Identity=30.4225352112676, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1789453, Length=338, Percent_Identity=29.2899408284024, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI2367378, Length=322, Percent_Identity=27.0186335403727, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1788195, Length=282, Percent_Identity=29.0780141843972, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788194, Length=302, Percent_Identity=30.1324503311258, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 68258; Mature: 68258

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTIKQKIQLAVLLVIVTITAVLALISTKQLNQHTEHAIATRFALQGEAVSNNIFSWLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DKKRIISANEAPLQNGLDNAKELELSIRAGGFINLYMGLDNGKVISGDKSVEIPADFDGR
HHHHHHCCCCCCHHCCCCCHHHEEEEEECCCEEEEEEECCCCEEECCCCCEECCCCCCCC
TRPWYRDAFNSHEIITTLPYVDISGDTVVTLAKRFNGQFSGVLAADLSISYITQQIDNLN
CCCHHHHCCCCCCEEEEECEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCC
IANSGFAFLLDENNNILAFRDRSYAQQDAKRLSQQLTQSNIQTLRNSGEISTIEWQDGQD
CCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
KLISLTQLKGTNWTLGLVEDKNLAYQAIEQQIQQSLFAVTILAIIILLIASVAVNYLFKP
HHEEHHEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLSLAIEALSKGDGDLTQRFAANREDEIGQLERHMNRFLASLQQMIKAISNDTEQLIK
HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QIHESSDIAAKASDGVNGQHQDVDQIATAIHEMSATASEVANHAEMTANAAQVSTQACIE
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNDVIIKSSDSIELLSEQLGDASKVVSALEENATEINKILSTIQAIAEQTNLLALNAAIE
CCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHH
AARAGEQGRGFAVVADEVRVLSHRTQDSTEEIRAMITTLQQNSQQAVASMASSTDIAHSS
HHHCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEFANQAKQSLESITDSITEISDMATQIASAAEEQRAVSEDISRNTQAISDTSHQLSSQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVTDNAVQMLQTSSSLSERVSRFKI
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLTIKQKIQLAVLLVIVTITAVLALISTKQLNQHTEHAIATRFALQGEAVSNNIFSWLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DKKRIISANEAPLQNGLDNAKELELSIRAGGFINLYMGLDNGKVISGDKSVEIPADFDGR
HHHHHHCCCCCCHHCCCCCHHHEEEEEECCCEEEEEEECCCCEEECCCCCEECCCCCCCC
TRPWYRDAFNSHEIITTLPYVDISGDTVVTLAKRFNGQFSGVLAADLSISYITQQIDNLN
CCCHHHHCCCCCCEEEEECEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCC
IANSGFAFLLDENNNILAFRDRSYAQQDAKRLSQQLTQSNIQTLRNSGEISTIEWQDGQD
CCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
KLISLTQLKGTNWTLGLVEDKNLAYQAIEQQIQQSLFAVTILAIIILLIASVAVNYLFKP
HHEEHHEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLSLAIEALSKGDGDLTQRFAANREDEIGQLERHMNRFLASLQQMIKAISNDTEQLIK
HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QIHESSDIAAKASDGVNGQHQDVDQIATAIHEMSATASEVANHAEMTANAAQVSTQACIE
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNDVIIKSSDSIELLSEQLGDASKVVSALEENATEINKILSTIQAIAEQTNLLALNAAIE
CCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHH
AARAGEQGRGFAVVADEVRVLSHRTQDSTEEIRAMITTLQQNSQQAVASMASSTDIAHSS
HHHCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEFANQAKQSLESITDSITEISDMATQIASAAEEQRAVSEDISRNTQAISDTSHQLSSQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVTDNAVQMLQTSSSLSERVSRFKI
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA