| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is artP [H]
Identifier: 157963211
GI number: 157963211
Start: 4151994
End: 4152731
Strand: Direct
Name: artP [H]
Synonym: Spea_3397
Alternate gene names: 157963211
Gene position: 4151994-4152731 (Clockwise)
Preceding gene: 157963208
Following gene: 157963212
Centisome position: 80.24
GC content: 45.39
Gene sequence:
>738_bases ATGAAGAAGTCAGTATTGGTTGTAGCAAGCTTAGGGTTAACAGGCGCTTTAATGTTAACTGGCTGCGGTAAGAGTGATGA TGTACTTGTTGTAGGCACCAATGCTTCATTCCCGCCATTTGAATATGTAGGCGGTGCTAGCGGCGATGAGATAATGGGCT TCGATATCGATTTAGCTAAGCAAATAGCAAAAGATGCCGGTAAAACCCTCAAAGTTGAAAACATGAATTTTGACTCGCTG ATTGTTGCGCTCAATGCAGGCAAGGTCGACTTTATCGCCTCGGGCATGACTATTACCCCAGAGCGTCAGGCAAGCGTCGA TTTCTCAGAGCCTTACTATGAAGCCACTCAGATGGTGTTAGTCAATAAAGATAACAACAGCATCAATAGTCTAGACGACC TTAAGGGTAAGCATATCGCGGTACAGCTAGGCTCAACCGGCGACATCATGGCCAAGAGCTACAGCCAACAGGTTACCGCC TTCAACTCAGGCTTCGAAGCCGTGATGGAGCTAAAAAATGCCAAGGTTGATTTGGTGTTGTTTGACAGCGAACCTGCCAT CAGCTTTTTAGAGAAGAATCCACAGCTAAAAATGGTTGAGCTGGATTTTTCACCTGAGTTTTATGGCTTTGCAGTGGCTA AGGACAAAGTTGAACTGCTAAACAGCATCAACAGCAGCTTAAGCATCATGAAGCAAAACGGTGGCTATGACGCCCTCGTT AACAAGCATATGAAGTGA
Upstream 100 bases:
>100_bases GAATCGAATTTTTACGCATTTTTGATGCATAAGTATTGATTTTGATTTTTATCAGTTTATAGTCAATGCCAGTTGAGTAT TTTGATTAAGAGAATTGATA
Downstream 100 bases:
>100_bases GCAGGCAATGATAGATGCAATTAACGCTTCACTGTTTACCCCCATAGGCGAAGATGGCTTAATCGGAATTTACCTTATTC TTAACGGCCTTAAAGTCACC
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKSVLVVASLGLTGALMLTGCGKSDDVLVVGTNASFPPFEYVGGASGDEIMGFDIDLAKQIAKDAGKTLKVENMNFDSL IVALNAGKVDFIASGMTITPERQASVDFSEPYYEATQMVLVNKDNNSINSLDDLKGKHIAVQLGSTGDIMAKSYSQQVTA FNSGFEAVMELKNAKVDLVLFDSEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKVELLNSINSSLSIMKQNGGYDALV NKHMK
Sequences:
>Translated_245_residues MKKSVLVVASLGLTGALMLTGCGKSDDVLVVGTNASFPPFEYVGGASGDEIMGFDIDLAKQIAKDAGKTLKVENMNFDSL IVALNAGKVDFIASGMTITPERQASVDFSEPYYEATQMVLVNKDNNSINSLDDLKGKHIAVQLGSTGDIMAKSYSQQVTA FNSGFEAVMELKNAKVDLVLFDSEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKVELLNSINSSLSIMKQNGGYDALV NKHMK >Mature_245_residues MKKSVLVVASLGLTGALMLTGCGKSDDVLVVGTNASFPPFEYVGGASGDEIMGFDIDLAKQIAKDAGKTLKVENMNFDSL IVALNAGKVDFIASGMTITPERQASVDFSEPYYEATQMVLVNKDNNSINSLDDLKGKHIAVQLGSTGDIMAKSYSQQVTA FNSGFEAVMELKNAKVDLVLFDSEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKVELLNSINSSLSIMKQNGGYDALV NKHMK
Specific function: Part of a binding-protein-dependent transport system for arginine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=246, Percent_Identity=34.5528455284553, Blast_Score=130, Evalue=6e-32, Organism=Escherichia coli, GI1787085, Length=220, Percent_Identity=35.9090909090909, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1787088, Length=226, Percent_Identity=32.7433628318584, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=28.6995515695067, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI1788649, Length=257, Percent_Identity=29.9610894941634, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=25.764192139738, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26402; Mature: 26402
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVLVVASLGLTGALMLTGCGKSDDVLVVGTNASFPPFEYVGGASGDEIMGFDIDLAK CCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCHHHHH QIAKDAGKTLKVENMNFDSLIVALNAGKVDFIASGMTITPERQASVDFSEPYYEATQMVL HHHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEE VNKDNNSINSLDDLKGKHIAVQLGSTGDIMAKSYSQQVTAFNSGFEAVMELKNAKVDLVL EECCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEE FDSEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKVELLNSINSSLSIMKQNGGYDALV ECCCCCHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHH NKHMK HCCCC >Mature Secondary Structure MKKSVLVVASLGLTGALMLTGCGKSDDVLVVGTNASFPPFEYVGGASGDEIMGFDIDLAK CCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCHHHHH QIAKDAGKTLKVENMNFDSLIVALNAGKVDFIASGMTITPERQASVDFSEPYYEATQMVL HHHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEE VNKDNNSINSLDDLKGKHIAVQLGSTGDIMAKSYSQQVTAFNSGFEAVMELKNAKVDLVL EECCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEE FDSEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKVELLNSINSSLSIMKQNGGYDALV ECCCCCHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCCHHHH NKHMK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]