| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is add [H]
Identifier: 157963207
GI number: 157963207
Start: 4147086
End: 4148081
Strand: Direct
Name: add [H]
Synonym: Spea_3392
Alternate gene names: 157963207
Gene position: 4147086-4148081 (Clockwise)
Preceding gene: 157963206
Following gene: 157963208
Centisome position: 80.14
GC content: 44.38
Gene sequence:
>996_bases ATGAATTATCTACAGCTACCCAAAATCGATCTTCACTGCCACTTAGACGGAAGTGTTCGTCCGCAAACCGTTATCGACCT TGCTAAACTTCAAGACGTTACTATCCCAAGTTTTAACGTCGATGACATTAAAGCTTTAATGGTGGCTCCCGCATCTTGCC CGAATCTCGATGAATACCTAACCCGCTTTGCACTGCCAGTTTCTGTGATGCAAACAGAAGCGGCGCTTGAGCGTATCTCG TTCGAGCTTTTTGAAGATGCGGCTAAAGAGAATGTGAAGTACCTAGAGGTACGTTTTGGCCCGCAACTTCATCAAAAAAT GAGTCTGAACTTCGAGCAGATTATTGGCAGTGTCGTTAAAGGTATGCGCAGAGCTGAAGCACAGTACGACATCAAAGGTA ACTACATATTATCGATCATTAAGGTACTACCAAAAGATGATATCAATGATGTTATCGATGCCGGTGCTAAGTTCCTCAAC AACGGTGTGGTCGCTTTTGACTTAGCCGCTAGCGAAGAGCCAGGCTTCTGCCACGAGTACATTCCTTACGCCAAGTATGC TCTAGAAAAAGGCTATAGAATCACCATTCACGCTGGTGAGCAAGGTGTCGGCCAAAATGTGTATGATGCTATCTCACTTT TAGGCGCCGAGCGCATCGGTCATGGCATTCATATCAATAGCCACCAACAAGCTTACGAATTAGTTAAAACAGAAGCCGTA GCACTCGAAACCTGCCCTAGCAGTAACGTGCAAACTAAAGCGGTTGAAAGCATAGAGAGTCACCCATTTGGAGACTTCTA CCGCGATGGTTTGTTGGTCACCATTAACACTGATAACCGTACCGTGTCAGACACGACAATGACCAAAGAGCTACAGCTTG CAGCTGAGAAGTTTAACTTAACTGAAGCAGACTATTTTGCCATCTATAAGATGAGTGTCGACAATGCGTTTACATCCGAC GAAGTGAAACTGTCTCTATTAAAATTTATCGATTAA
Upstream 100 bases:
>100_bases TATGTAATGCTAATTTAACAAGTTTAGTGCTTTGTTGCTGTGCAACATGTGAGCGCTGATGGACTTAGATGGGTATAACC ACTTAATAAAGGAGAGCTTC
Downstream 100 bases:
>100_bases CCTTTATCGGTTTCTTATCTCAGGACGGGACAGACAAACTAAAAAAGCCTATTGGTTCAATCAATAGGCTTTTGTGTCTG TACCAATCTAATTAAAACAC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MNYLQLPKIDLHCHLDGSVRPQTVIDLAKLQDVTIPSFNVDDIKALMVAPASCPNLDEYLTRFALPVSVMQTEAALERIS FELFEDAAKENVKYLEVRFGPQLHQKMSLNFEQIIGSVVKGMRRAEAQYDIKGNYILSIIKVLPKDDINDVIDAGAKFLN NGVVAFDLAASEEPGFCHEYIPYAKYALEKGYRITIHAGEQGVGQNVYDAISLLGAERIGHGIHINSHQQAYELVKTEAV ALETCPSSNVQTKAVESIESHPFGDFYRDGLLVTINTDNRTVSDTTMTKELQLAAEKFNLTEADYFAIYKMSVDNAFTSD EVKLSLLKFID
Sequences:
>Translated_331_residues MNYLQLPKIDLHCHLDGSVRPQTVIDLAKLQDVTIPSFNVDDIKALMVAPASCPNLDEYLTRFALPVSVMQTEAALERIS FELFEDAAKENVKYLEVRFGPQLHQKMSLNFEQIIGSVVKGMRRAEAQYDIKGNYILSIIKVLPKDDINDVIDAGAKFLN NGVVAFDLAASEEPGFCHEYIPYAKYALEKGYRITIHAGEQGVGQNVYDAISLLGAERIGHGIHINSHQQAYELVKTEAV ALETCPSSNVQTKAVESIESHPFGDFYRDGLLVTINTDNRTVSDTTMTKELQLAAEKFNLTEADYFAIYKMSVDNAFTSD EVKLSLLKFID >Mature_331_residues MNYLQLPKIDLHCHLDGSVRPQTVIDLAKLQDVTIPSFNVDDIKALMVAPASCPNLDEYLTRFALPVSVMQTEAALERIS FELFEDAAKENVKYLEVRFGPQLHQKMSLNFEQIIGSVVKGMRRAEAQYDIKGNYILSIIKVLPKDDINDVIDAGAKFLN NGVVAFDLAASEEPGFCHEYIPYAKYALEKGYRITIHAGEQGVGQNVYDAISLLGAERIGHGIHINSHQQAYELVKTEAV ALETCPSSNVQTKAVESIESHPFGDFYRDGLLVTINTDNRTVSDTTMTKELQLAAEKFNLTEADYFAIYKMSVDNAFTSD EVKLSLLKFID
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=347, Percent_Identity=26.5129682997118, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI226693318, Length=335, Percent_Identity=25.0746268656716, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI1787910, Length=325, Percent_Identity=28.9230769230769, Blast_Score=158, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17538512, Length=345, Percent_Identity=32.1739130434783, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI32565969, Length=345, Percent_Identity=32.1739130434783, Blast_Score=145, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115537133, Length=325, Percent_Identity=24.9230769230769, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324188, Length=331, Percent_Identity=23.8670694864048, Blast_Score=120, Evalue=2e-28, Organism=Drosophila melanogaster, GI24645260, Length=327, Percent_Identity=26.9113149847095, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36921; Mature: 36921
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLQLPKIDLHCHLDGSVRPQTVIDLAKLQDVTIPSFNVDDIKALMVAPASCPNLDEYL CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHEECCCCCCCHHHHH TRFALPVSVMQTEAALERISFELFEDAAKENVKYLEVRFGPQLHQKMSLNFEQIIGSVVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHHHHHH GMRRAEAQYDIKGNYILSIIKVLPKDDINDVIDAGAKFLNNGVVAFDLAASEEPGFCHEY HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHH IPYAKYALEKGYRITIHAGEQGVGQNVYDAISLLGAERIGHGIHINSHQQAYELVKTEAV HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH ALETCPSSNVQTKAVESIESHPFGDFYRDGLLVTINTDNRTVSDTTMTKELQLAAEKFNL EEECCCCCCCHHHHHHHHHCCCCCCHHHCCEEEEEECCCCEECCHHHHHHHHHHHHHCCC TEADYFAIYKMSVDNAFTSDEVKLSLLKFID CCCCEEEEEEEECCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MNYLQLPKIDLHCHLDGSVRPQTVIDLAKLQDVTIPSFNVDDIKALMVAPASCPNLDEYL CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHEECCCCCCCHHHHH TRFALPVSVMQTEAALERISFELFEDAAKENVKYLEVRFGPQLHQKMSLNFEQIIGSVVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHHHHHH GMRRAEAQYDIKGNYILSIIKVLPKDDINDVIDAGAKFLNNGVVAFDLAASEEPGFCHEY HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHH IPYAKYALEKGYRITIHAGEQGVGQNVYDAISLLGAERIGHGIHINSHQQAYELVKTEAV HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHH ALETCPSSNVQTKAVESIESHPFGDFYRDGLLVTINTDNRTVSDTTMTKELQLAAEKFNL EEECCCCCCCHHHHHHHHHCCCCCCHHHCCEEEEEECCCCEECCHHHHHHHHHHHHHCCC TEADYFAIYKMSVDNAFTSDEVKLSLLKFID CCCCEEEEEEEECCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA