| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is hutH [H]
Identifier: 157963184
GI number: 157963184
Start: 4116764
End: 4118449
Strand: Direct
Name: hutH [H]
Synonym: Spea_3369
Alternate gene names: 157963184
Gene position: 4116764-4118449 (Clockwise)
Preceding gene: 157963183
Following gene: 157963185
Centisome position: 79.56
GC content: 47.69
Gene sequence:
>1686_bases GTGCCCTGCACTGAGCAGCAAAAAATTATGGAATTGATCAAGATGAAAACAACTAAAAATGCTGTATTAACATCACTCGC ACTTGCATTAACTGCGACTCATGCCATGGCTGCAGACACTGTGGTACTCGACGGTAAACACTTTACCCAAGATCAAGCTT GGGCGATTGCCGATGGCGCTAAAGTAAAAATCGCACCGCAATCAGCGACAACCTTAGTCAAAGCCCATGAGTTATTAATG GAAGCCGCTCGTCTAGGCAAGCCAGTTTATGGACTAACAGTTGGTGTAGGTCTAAACAAAGATCATAAACTATTCGATGC TAACGGTGAGCTAAGCGCTGAAGTATTAAAGGCTTCTGAGTCGTTCAACTACAGCACGCTTCGCGCTCACAGCGCTGGTG TAGGTGAAGCCATGCCAGTGCGTTTAACTCGTGTTGCGCTAGCCGTACGCTTAAACACCATCTTGTCTGGTCACACAGGC GTACAGCCTTATGTTGCCGAGATTTACCAAGCTTACCTAAATAACGATATCTCACCAATTATCCCATCTAAGGGCACGGT AGGCGAAGCGGACATCCTACTGGCTTCTCATGTTGGCCTAGCCATGATTGGTGAATGGGATGTGATCTACAAAGGCAAGC GCATGAACAGCGCCGAAGCGATGAAAAAAGCGGGGATCAAGCCGCTAGCCCCTGTAGGTAAAGATGCGCTGTCGATTCTG TCCAACAACTCTGTTGGCGTGGCTTACGCGATGAAGGGTTACCGCGATGCTAAGCATTTACTAGAGGTCTCACCAACGGT ATTTAGCCTAAGCCTTGAAGGCCTAAACGGTAACGTGTCGCCATTCTTGCCACAGACCAATGACATTCGCCCTTTCCCAT ACCTAAAAGAAGCGACAGCCGATGTGCGTAATACCCTATCTGGAAGCTACTTATGGGATGCCAATAGCGAACGTCCACTG CAAGATCCACTCAGCTACCGCACCACAGCCTATACGTTTGCTAGCGCCTACAAGGCACTAGCAGATCTTGGACAGATGAT TGATATCCAGATCAACCATTCAGACGACAACCCAGGTGTGATATTAGGTGCGGGTAAAGACTACGGTAACAACTCTCAGG TCTCTAAGTATTTAGTTGAAGGCAAAGGCGGTGTGTTCCCAACTACCAACTTTGAACCACTCCCTGTCGCACTTGCCGTA CAACAACTAAGCATCGCGCTGACTCACGTTTCACATAACAGTGCCATGCGTACTATCCACCTATCGGATGACCACTTTAC TCGTCTACCGCGTTTCTTAAGCGCACCGGGTAACAATGGCCACGCATTCGGTGCAATCCAGAAGAGCTTCGTTGATATGC AGGTTCGTAATAAAGCCTTAGCAAACCCTGTTTCATTCGACGGTATCCAAATTGCTGGTAACATCGAAGACACCTTCACT AACTTGAAATTGGCGTCTGACAGACTTATCCAAATCGTTGATAACACAAACGTAATGTACGGCCTAGAGCTGATGCACTC GACTCAAGCTATCGACCTACGCAAACTTGCAGACAAGAACATCAAGCAAGGCGAAGCGACTAAAGCCATGTATGAAGCTT TCCGTAAGCAAGTGCCATTTGTTGAAGTTGACCGTCCATTCACACCAGACATTCAGGCTGCATACGAGTTTGTGACTAAG CTCTAG
Upstream 100 bases:
>100_bases AGTAGTAACTGGACGTAATGCTGGTCGTCATTGTTCACAGAGCCAGCCAGTGAAACTGAATCTCGCTTAGCTCAAATAAA AATCAAATTCGCTTAGCTAA
Downstream 100 bases:
>100_bases CTCATAAGTTAGGGGGGCGATACGAGTCCCCCACGCTCTACTGGCTGCGATAGGTACCACTCCCGCCTATTGCAGCAAAT CGAGTCACAAGGCTAAGGAA
Product: phenylalanine/histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MPCTEQQKIMELIKMKTTKNAVLTSLALALTATHAMAADTVVLDGKHFTQDQAWAIADGAKVKIAPQSATTLVKAHELLM EAARLGKPVYGLTVGVGLNKDHKLFDANGELSAEVLKASESFNYSTLRAHSAGVGEAMPVRLTRVALAVRLNTILSGHTG VQPYVAEIYQAYLNNDISPIIPSKGTVGEADILLASHVGLAMIGEWDVIYKGKRMNSAEAMKKAGIKPLAPVGKDALSIL SNNSVGVAYAMKGYRDAKHLLEVSPTVFSLSLEGLNGNVSPFLPQTNDIRPFPYLKEATADVRNTLSGSYLWDANSERPL QDPLSYRTTAYTFASAYKALADLGQMIDIQINHSDDNPGVILGAGKDYGNNSQVSKYLVEGKGGVFPTTNFEPLPVALAV QQLSIALTHVSHNSAMRTIHLSDDHFTRLPRFLSAPGNNGHAFGAIQKSFVDMQVRNKALANPVSFDGIQIAGNIEDTFT NLKLASDRLIQIVDNTNVMYGLELMHSTQAIDLRKLADKNIKQGEATKAMYEAFRKQVPFVEVDRPFTPDIQAAYEFVTK L
Sequences:
>Translated_561_residues MPCTEQQKIMELIKMKTTKNAVLTSLALALTATHAMAADTVVLDGKHFTQDQAWAIADGAKVKIAPQSATTLVKAHELLM EAARLGKPVYGLTVGVGLNKDHKLFDANGELSAEVLKASESFNYSTLRAHSAGVGEAMPVRLTRVALAVRLNTILSGHTG VQPYVAEIYQAYLNNDISPIIPSKGTVGEADILLASHVGLAMIGEWDVIYKGKRMNSAEAMKKAGIKPLAPVGKDALSIL SNNSVGVAYAMKGYRDAKHLLEVSPTVFSLSLEGLNGNVSPFLPQTNDIRPFPYLKEATADVRNTLSGSYLWDANSERPL QDPLSYRTTAYTFASAYKALADLGQMIDIQINHSDDNPGVILGAGKDYGNNSQVSKYLVEGKGGVFPTTNFEPLPVALAV QQLSIALTHVSHNSAMRTIHLSDDHFTRLPRFLSAPGNNGHAFGAIQKSFVDMQVRNKALANPVSFDGIQIAGNIEDTFT NLKLASDRLIQIVDNTNVMYGLELMHSTQAIDLRKLADKNIKQGEATKAMYEAFRKQVPFVEVDRPFTPDIQAAYEFVTK L >Mature_560_residues PCTEQQKIMELIKMKTTKNAVLTSLALALTATHAMAADTVVLDGKHFTQDQAWAIADGAKVKIAPQSATTLVKAHELLME AARLGKPVYGLTVGVGLNKDHKLFDANGELSAEVLKASESFNYSTLRAHSAGVGEAMPVRLTRVALAVRLNTILSGHTGV QPYVAEIYQAYLNNDISPIIPSKGTVGEADILLASHVGLAMIGEWDVIYKGKRMNSAEAMKKAGIKPLAPVGKDALSILS NNSVGVAYAMKGYRDAKHLLEVSPTVFSLSLEGLNGNVSPFLPQTNDIRPFPYLKEATADVRNTLSGSYLWDANSERPLQ DPLSYRTTAYTFASAYKALADLGQMIDIQINHSDDNPGVILGAGKDYGNNSQVSKYLVEGKGGVFPTTNFEPLPVALAVQ QLSIALTHVSHNSAMRTIHLSDDHFTRLPRFLSAPGNNGHAFGAIQKSFVDMQVRNKALANPVSFDGIQIAGNIEDTFTN LKLASDRLIQIVDNTNVMYGLELMHSTQAIDLRKLADKNIKQGEATKAMYEAFRKQVPFVEVDRPFTPDIQAAYEFVTKL
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=531, Percent_Identity=22.9755178907721, Blast_Score=128, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17567831, Length=530, Percent_Identity=22.8301886792453, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 60870; Mature: 60739
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCTEQQKIMELIKMKTTKNAVLTSLALALTATHAMAADTVVLDGKHFTQDQAWAIADGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCC KVKIAPQSATTLVKAHELLMEAARLGKPVYGLTVGVGLNKDHKLFDANGELSAEVLKASE EEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHCC SFNYSTLRAHSAGVGEAMPVRLTRVALAVRLNTILSGHTGVQPYVAEIYQAYLNNDISPI CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC IPSKGTVGEADILLASHVGLAMIGEWDVIYKGKRMNSAEAMKKAGIKPLAPVGKDALSIL CCCCCCCCCHHEEEECCCCEEEECCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHH SNNSVGVAYAMKGYRDAKHLLEVSPTVFSLSLEGLNGNVSPFLPQTNDIRPFPYLKEATA CCCCCEEEEEHHCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH DVRNTLSGSYLWDANSERPLQDPLSYRTTAYTFASAYKALADLGQMIDIQINHSDDNPGV HHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCE ILGAGKDYGNNSQVSKYLVEGKGGVFPTTNFEPLPVALAVQQLSIALTHVSHNSAMRTIH EEECCCCCCCCHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCEEEEE LSDDHFTRLPRFLSAPGNNGHAFGAIQKSFVDMQVRNKALANPVSFDGIQIAGNIEDTFT ECCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH NLKLASDRLIQIVDNTNVMYGLELMHSTQAIDLRKLADKNIKQGEATKAMYEAFRKQVPF HHEECCCCEEEEECCCCEEEEHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCE VEVDRPFTPDIQAAYEFVTKL EEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure PCTEQQKIMELIKMKTTKNAVLTSLALALTATHAMAADTVVLDGKHFTQDQAWAIADGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCC KVKIAPQSATTLVKAHELLMEAARLGKPVYGLTVGVGLNKDHKLFDANGELSAEVLKASE EEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHCC SFNYSTLRAHSAGVGEAMPVRLTRVALAVRLNTILSGHTGVQPYVAEIYQAYLNNDISPI CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC IPSKGTVGEADILLASHVGLAMIGEWDVIYKGKRMNSAEAMKKAGIKPLAPVGKDALSIL CCCCCCCCCHHEEEECCCCEEEECCEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHH SNNSVGVAYAMKGYRDAKHLLEVSPTVFSLSLEGLNGNVSPFLPQTNDIRPFPYLKEATA CCCCCEEEEEHHCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH DVRNTLSGSYLWDANSERPLQDPLSYRTTAYTFASAYKALADLGQMIDIQINHSDDNPGV HHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCE ILGAGKDYGNNSQVSKYLVEGKGGVFPTTNFEPLPVALAVQQLSIALTHVSHNSAMRTIH EEECCCCCCCCHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCEEEEE LSDDHFTRLPRFLSAPGNNGHAFGAIQKSFVDMQVRNKALANPVSFDGIQIAGNIEDTFT ECCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH NLKLASDRLIQIVDNTNVMYGLELMHSTQAIDLRKLADKNIKQGEATKAMYEAFRKQVPF HHEECCCCEEEEECCCCEEEEHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCE VEVDRPFTPDIQAAYEFVTKL EEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA