Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963132

Identifier: 157963132

GI number: 157963132

Start: 4057654

End: 4058187

Strand: Direct

Name: 157963132

Synonym: Spea_3316

Alternate gene names: NA

Gene position: 4057654-4058187 (Clockwise)

Preceding gene: 157963131

Following gene: 157963133

Centisome position: 78.42

GC content: 46.07

Gene sequence:

>534_bases
ATGGTTAGAAACACAACATCTTCAGGATTTACCCTCATTGAAATGGTTGTCGTTATCATCGTTTTAGCGATCTTAGCCGT
TATCGCCGCTTCCAAGTTTATCAATCTTAGCCAAGATGCCGAAATTGCCAGCGTGCAGGCCACGGGGGCAGCCTTTAAAG
GTGGGATCAGCTTAGCCAACGTTAAGTGGGCATCTAAAGGCGCTATTGGCCCAGTCGATAACCTGCAAGTCTTTGCTGAT
GGTAGTAATGGACAGTTGGATATCAACCAATGGGGCTTTCCGGCGCAAAATTACCCACCTTTCGAGTCAAGCCCGAGACT
TAATAACGTTGCTGACTGTATATCTGTTTGGCGCACTATTTTACAAGATGCACCAGTGGTATCGGATTCAGCCAATACGC
CTGATGCGGACTATTTAGCGAGCTATATTAGCCCCGATCAGTGCCGTTACTTCTATCTTCCACAACAGACCATGTCTATC
TATTATGACTCCCGTAACGGCAGCGTTATTACCGATTCAGATCCCATTAGTTAA

Upstream 100 bases:

>100_bases
GACTCAGATCCGAGCAGCTAGCATAAACCTGCTTAGATGAAATCAGAATAGGTCTGCTTGGGTAAAACGAGAGCATCAAC
TTAAAATAACGGACTGATTT

Downstream 100 bases:

>100_bases
TAACAATGATTCATTAATGTCTCGTTTAAGTTAGAATCGAGACACTATCCTAGGTAAACAAGAGCATAAGCAAGATGTCA
GAAGCTAAAAAAGAAACCAC

Product: methylation site containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLANVKWASKGAIGPVDNLQVFAD
GSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTILQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSI
YYDSRNGSVITDSDPIS

Sequences:

>Translated_177_residues
MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLANVKWASKGAIGPVDNLQVFAD
GSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTILQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSI
YYDSRNGSVITDSDPIS
>Mature_177_residues
MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLANVKWASKGAIGPVDNLQVFAD
GSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTILQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSI
YYDSRNGSVITDSDPIS

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19048; Mature: 19048

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHCCEEEEE
VKWASKGAIGPVDNLQVFADGSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTI
EEECCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSIYYDSRNGSVITDSDPIS
HHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHCCEEEEE
VKWASKGAIGPVDNLQVFADGSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTI
EEECCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSIYYDSRNGSVITDSDPIS
HHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA