| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963132
Identifier: 157963132
GI number: 157963132
Start: 4057654
End: 4058187
Strand: Direct
Name: 157963132
Synonym: Spea_3316
Alternate gene names: NA
Gene position: 4057654-4058187 (Clockwise)
Preceding gene: 157963131
Following gene: 157963133
Centisome position: 78.42
GC content: 46.07
Gene sequence:
>534_bases ATGGTTAGAAACACAACATCTTCAGGATTTACCCTCATTGAAATGGTTGTCGTTATCATCGTTTTAGCGATCTTAGCCGT TATCGCCGCTTCCAAGTTTATCAATCTTAGCCAAGATGCCGAAATTGCCAGCGTGCAGGCCACGGGGGCAGCCTTTAAAG GTGGGATCAGCTTAGCCAACGTTAAGTGGGCATCTAAAGGCGCTATTGGCCCAGTCGATAACCTGCAAGTCTTTGCTGAT GGTAGTAATGGACAGTTGGATATCAACCAATGGGGCTTTCCGGCGCAAAATTACCCACCTTTCGAGTCAAGCCCGAGACT TAATAACGTTGCTGACTGTATATCTGTTTGGCGCACTATTTTACAAGATGCACCAGTGGTATCGGATTCAGCCAATACGC CTGATGCGGACTATTTAGCGAGCTATATTAGCCCCGATCAGTGCCGTTACTTCTATCTTCCACAACAGACCATGTCTATC TATTATGACTCCCGTAACGGCAGCGTTATTACCGATTCAGATCCCATTAGTTAA
Upstream 100 bases:
>100_bases GACTCAGATCCGAGCAGCTAGCATAAACCTGCTTAGATGAAATCAGAATAGGTCTGCTTGGGTAAAACGAGAGCATCAAC TTAAAATAACGGACTGATTT
Downstream 100 bases:
>100_bases TAACAATGATTCATTAATGTCTCGTTTAAGTTAGAATCGAGACACTATCCTAGGTAAACAAGAGCATAAGCAAGATGTCA GAAGCTAAAAAAGAAACCAC
Product: methylation site containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLANVKWASKGAIGPVDNLQVFAD GSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTILQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSI YYDSRNGSVITDSDPIS
Sequences:
>Translated_177_residues MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLANVKWASKGAIGPVDNLQVFAD GSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTILQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSI YYDSRNGSVITDSDPIS >Mature_177_residues MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLANVKWASKGAIGPVDNLQVFAD GSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTILQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSI YYDSRNGSVITDSDPIS
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19048; Mature: 19048
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLAN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHCCEEEEE VKWASKGAIGPVDNLQVFADGSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTI EEECCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSIYYDSRNGSVITDSDPIS HHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCEECCCCCCC >Mature Secondary Structure MVRNTTSSGFTLIEMVVVIIVLAILAVIAASKFINLSQDAEIASVQATGAAFKGGISLAN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHCCEEEEE VKWASKGAIGPVDNLQVFADGSNGQLDINQWGFPAQNYPPFESSPRLNNVADCISVWRTI EEECCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LQDAPVVSDSANTPDADYLASYISPDQCRYFYLPQQTMSIYYDSRNGSVITDSDPIS HHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA