Click here to switch to the map view.

The map label for this gene is 157963129

Identifier: 157963129

GI number: 157963129

Start: 4055275

End: 4056012

Strand: Direct

Name: 157963129

Synonym: Spea_3313

Alternate gene names: NA

Gene position: 4055275-4056012 (Clockwise)

Preceding gene: 157963128

Following gene: 157963131

Centisome position: 78.37

GC content: 44.72

Gene sequence:

>738_bases
ATGGTTAATTTTTCGCAAATGACTCATCACCTTCACTCTCCAATAACCTGGCTGAGCATTCTGCTATTAACCGGACTGAG
CTGGTATTACATGCTATTTGATATGACCATGGTCATGTCGCCCCACTGGCATTTATATGAACTCACCATGGTGTTTGTTA
TGTGGGCCGTGATGATGGCCGGCATGATGATGCCCTCTGCCACGCCGATGATTTTGCTATTCGCGAAAATAAACCGCACA
CGCCTACAGAGATCTGCCGAATTTGTCTCATCGAACCTGTTTATCTTAGGTTATCTGCTCGTTTGGAGTCTCTACAGCCT
AGTTATCACCCTGATGCAATGGCAGTTACATGAACTGGCGTTGATGACGCCTATGATGAAAAGCAGTAATGATATCGCCA
GTGGTATTTTATTAATCCTTATCGGTATCTATCAGATCTCCCCCTTGAAGCAACAGTGTTTAAATTACTGTCGCTCGCCA
CTTAACTTTCTTATGACCCAATGGCAGGAGGGAAAATTAGGCGCAGTTAAGATGGGGCTCAAACACGGATTATATTGCGT
GGGCTGCTGCTGGCTATTAATGGCTTTACTACTGGTAGTCGGCGTGATGCATATAGGTTGGATCTTAGCGCTATCGATTC
TTGTCTTACTGGAAAAGGTTGTTAACTGGCCTAAAACGATTAACCTAGGTATTTGCCTAACTTGCATCGGCTCCGGGATC
TATTTCTTGGTGGGGTAA

Upstream 100 bases:

>100_bases
TTAACCATGCCGGCAAGTTTGCCGCTAAGGCCAATGTGCAATGGCCAAACGGATAGTCGCCTTTAACAGAGAAGCTCTTC
GACAGCGAAGAGATTAGCCA

Downstream 100 bases:

>100_bases
CAATTAAGTACGCTAATTGAGGCAGAGCTAGATAAAGTAAAAAGAGCGCAATGCGCTCTTTTTGTTTGTATCGCTGACAA
TTATACCTGCCAGTCTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MVNFSQMTHHLHSPITWLSILLLTGLSWYYMLFDMTMVMSPHWHLYELTMVFVMWAVMMAGMMMPSATPMILLFAKINRT
RLQRSAEFVSSNLFILGYLLVWSLYSLVITLMQWQLHELALMTPMMKSSNDIASGILLILIGIYQISPLKQQCLNYCRSP
LNFLMTQWQEGKLGAVKMGLKHGLYCVGCCWLLMALLLVVGVMHIGWILALSILVLLEKVVNWPKTINLGICLTCIGSGI
YFLVG

Sequences:

>Translated_245_residues
MVNFSQMTHHLHSPITWLSILLLTGLSWYYMLFDMTMVMSPHWHLYELTMVFVMWAVMMAGMMMPSATPMILLFAKINRT
RLQRSAEFVSSNLFILGYLLVWSLYSLVITLMQWQLHELALMTPMMKSSNDIASGILLILIGIYQISPLKQQCLNYCRSP
LNFLMTQWQEGKLGAVKMGLKHGLYCVGCCWLLMALLLVVGVMHIGWILALSILVLLEKVVNWPKTINLGICLTCIGSGI
YFLVG
>Mature_245_residues
MVNFSQMTHHLHSPITWLSILLLTGLSWYYMLFDMTMVMSPHWHLYELTMVFVMWAVMMAGMMMPSATPMILLFAKINRT
RLQRSAEFVSSNLFILGYLLVWSLYSLVITLMQWQLHELALMTPMMKSSNDIASGILLILIGIYQISPLKQQCLNYCRSP
LNFLMTQWQEGKLGAVKMGLKHGLYCVGCCWLLMALLLVVGVMHIGWILALSILVLLEKVVNWPKTINLGICLTCIGSGI
YFLVG

Specific function: Unknown

COG id: COG5486

COG function: function code S; Predicted metal-binding integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27933; Mature: 27933

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
9.0 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
9.0 %Met     (Mature Protein)
11.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEC
>Mature Secondary Structure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EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA