Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963111

Identifier: 157963111

GI number: 157963111

Start: 4036322

End: 4037014

Strand: Direct

Name: 157963111

Synonym: Spea_3295

Alternate gene names: NA

Gene position: 4036322-4037014 (Clockwise)

Preceding gene: 157963110

Following gene: 157963115

Centisome position: 78.0

GC content: 41.85

Gene sequence:

>693_bases
ATGTCTAGAAAACCTAGAGCCAATCCGATAGGCATACCTCAACATGTCATTCAACGCGGTAATAACCGCCAAGCATGTTT
TGCTGCAGAACAAGACTTTATTGCCTATGCCGGATGGTTAAAGGACTATGCCAAGAAATTTCAGGTTGAAATCCATGCCT
GGGTATTTATGACAAACCATGTTCACCTACTTTGCACACCGCAAGAAACCAATGCGATTAGCCAAATGATGCAGTCTCTT
GGGCGACAGTATGTGAGGTATTTTAATTACACTTATAAACGCTCTGGAACACTATGGGAGGGACGATATAAGTCTTGCCT
AGTACAGACTGAAGACTATCTACTACAACTATATCACTATATAGAGCTCAATCCAGTTAGAGCAAATATGGTCGATGCCC
CTTCTGAATATCAATGGTCCAGTTACCAAATCAACGCCTTAGGCAAAGCCTCCACATTATGTACGCCTCACCCTGCTTAC
CTCGCTATTCATCCTACAGAAAAAGCCCGACAAGCATGTTATCGAGCACTCTTTAAACACCAGTTAGACACACAAATCAT
TGAAGATATTCGACAAGCAACCCACAAAGGCATGGCTATCGGAAATAATAAATTTAAAGATGATATTGAGAAACTAACAA
ACACAAACACGAGACCGCAGAAAATGGGGCGGCCAACAAAGCCAATAGCATAA

Upstream 100 bases:

>100_bases
TTTGTTATAGCACTAGAACAGTCAAAAGTAGGGGCGGAGTGAACTAAAGTTATTCATCTATACTCATTAACAAAGTGAAC
ATTGCAAAAGGAACTTGCAC

Downstream 100 bases:

>100_bases
AGTTTACTCTGACCCCACTTATTCACTTCTATTCTCTTCCACTTATTCTCTTCAGCAATAACTAAAGCTTAGTAAGAGGC
CGACAAACATGCCATTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNHVHLLCTPQETNAISQMMQSL
GRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHYIELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAY
LAIHPTEKARQACYRALFKHQLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA

Sequences:

>Translated_230_residues
MSRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNHVHLLCTPQETNAISQMMQSL
GRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHYIELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAY
LAIHPTEKARQACYRALFKHQLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA
>Mature_229_residues
SRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNHVHLLCTPQETNAISQMMQSLG
RQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHYIELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAYL
AIHPTEKARQACYRALFKHQLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26687; Mature: 26556

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNH
CCCCCCCCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
VHLLCTPQETNAISQMMQSLGRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCHHHHHHHHHHHHHHHHHHH
IELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAYLAIHPTEKARQACYRALFKH
HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
QLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA
HHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNH
CCCCCCCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
VHLLCTPQETNAISQMMQSLGRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCHHHHHHHHHHHHHHHHHHH
IELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAYLAIHPTEKARQACYRALFKH
HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
QLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA
HHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA