| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963111
Identifier: 157963111
GI number: 157963111
Start: 4036322
End: 4037014
Strand: Direct
Name: 157963111
Synonym: Spea_3295
Alternate gene names: NA
Gene position: 4036322-4037014 (Clockwise)
Preceding gene: 157963110
Following gene: 157963115
Centisome position: 78.0
GC content: 41.85
Gene sequence:
>693_bases ATGTCTAGAAAACCTAGAGCCAATCCGATAGGCATACCTCAACATGTCATTCAACGCGGTAATAACCGCCAAGCATGTTT TGCTGCAGAACAAGACTTTATTGCCTATGCCGGATGGTTAAAGGACTATGCCAAGAAATTTCAGGTTGAAATCCATGCCT GGGTATTTATGACAAACCATGTTCACCTACTTTGCACACCGCAAGAAACCAATGCGATTAGCCAAATGATGCAGTCTCTT GGGCGACAGTATGTGAGGTATTTTAATTACACTTATAAACGCTCTGGAACACTATGGGAGGGACGATATAAGTCTTGCCT AGTACAGACTGAAGACTATCTACTACAACTATATCACTATATAGAGCTCAATCCAGTTAGAGCAAATATGGTCGATGCCC CTTCTGAATATCAATGGTCCAGTTACCAAATCAACGCCTTAGGCAAAGCCTCCACATTATGTACGCCTCACCCTGCTTAC CTCGCTATTCATCCTACAGAAAAAGCCCGACAAGCATGTTATCGAGCACTCTTTAAACACCAGTTAGACACACAAATCAT TGAAGATATTCGACAAGCAACCCACAAAGGCATGGCTATCGGAAATAATAAATTTAAAGATGATATTGAGAAACTAACAA ACACAAACACGAGACCGCAGAAAATGGGGCGGCCAACAAAGCCAATAGCATAA
Upstream 100 bases:
>100_bases TTTGTTATAGCACTAGAACAGTCAAAAGTAGGGGCGGAGTGAACTAAAGTTATTCATCTATACTCATTAACAAAGTGAAC ATTGCAAAAGGAACTTGCAC
Downstream 100 bases:
>100_bases AGTTTACTCTGACCCCACTTATTCACTTCTATTCTCTTCCACTTATTCTCTTCAGCAATAACTAAAGCTTAGTAAGAGGC CGACAAACATGCCATTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNHVHLLCTPQETNAISQMMQSL GRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHYIELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAY LAIHPTEKARQACYRALFKHQLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA
Sequences:
>Translated_230_residues MSRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNHVHLLCTPQETNAISQMMQSL GRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHYIELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAY LAIHPTEKARQACYRALFKHQLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA >Mature_229_residues SRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNHVHLLCTPQETNAISQMMQSLG RQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHYIELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAYL AIHPTEKARQACYRALFKHQLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26687; Mature: 26556
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNH CCCCCCCCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECC VHLLCTPQETNAISQMMQSLGRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHY EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCHHHHHHHHHHHHHHHHHHH IELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAYLAIHPTEKARQACYRALFKH HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH QLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA HHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCCCCHHHCCCCCCCCC >Mature Secondary Structure SRKPRANPIGIPQHVIQRGNNRQACFAAEQDFIAYAGWLKDYAKKFQVEIHAWVFMTNH CCCCCCCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECC VHLLCTPQETNAISQMMQSLGRQYVRYFNYTYKRSGTLWEGRYKSCLVQTEDYLLQLYHY EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCHHHHHHHHHHHHHHHHHHH IELNPVRANMVDAPSEYQWSSYQINALGKASTLCTPHPAYLAIHPTEKARQACYRALFKH HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH QLDTQIIEDIRQATHKGMAIGNNKFKDDIEKLTNTNTRPQKMGRPTKPIA HHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA