| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963104
Identifier: 157963104
GI number: 157963104
Start: 4030159
End: 4031469
Strand: Direct
Name: 157963104
Synonym: Spea_3288
Alternate gene names: NA
Gene position: 4030159-4031469 (Clockwise)
Preceding gene: 157963103
Following gene: 157963107
Centisome position: 77.88
GC content: 38.83
Gene sequence:
>1311_bases ATGGAACCGTTATACCTAAAACTCAAATCGGACTTAAATCAGTTTTTTCAAGACCCTAATTATCTCGCCTTTTACCAGCG ATTTAAAGCTGTGACTTATCTGGATGGATATGTCACTTTTGATGAAAACCGCAAATCAGATACCTTACGTTGGTTACTAA CACCACGAGAAGGACACCTGCAACAAGACTACTTTATTAAAGCATTACTCGCAGCATATTACCGTGAAGCAACAACTGAG CAGTTAATTGATCTACCACAAGCATACGAGCTATCAGTAAAAAGCTTCAACCAAGCCACGGTTATGCGTGAGCTGGTGAT AACCAACAACAAAAGAATTGACCTATTGCTAGCCGATGCAGCATCCAAAACCCTCATTTTGATTGAGCGAAAAGACGGTA GCAAGGCCCATACTGGTCAACTCCTTTCCTATTTTGATTGGGCAGAAACCCATTACCCTGACTGGAAAAAATATTACATT TTATCTGACAGCTGCAATCAAAATCATGACAAACAAATGCATCCTGCATTCGTTCAATTGGATGATGAATGGATAAGCAC TGCGATAAAAAGGCTTCTCGAATCAGAAGCACTACCTGCTAGGCAAAGTGGTGTATTAAAAGACATTCAAGCCTATGTTT TCGGCGAGTGGGATGAACACACCGAAAAAGCAGATAAAGACATCACTAAGTATGCAAAGCTATTAGCCCATAAACATGCT TCATTATTTGAGACATTGAGTCATGAATCGGTGATGGCCAATGGTAAGCAAATACAATTAGGCCATGTATCACCACAGAA CTATTTCAATAGTCTTGCGTTAGAGTCGCAGGTAAGAGACAGTGATGATCTCAATGAATTGTTACTAATCTTGCAAGCAT CCCATGAAGTATTAGATTACATTCAAGACTACTCTTCCTTCGAGCATTTAGCCGATGAAATCAAGAATATTTACCCACAA ATAATATCTGATGTTGAATCCGACGGAGTGTCCTTTTTGCTAACTAAACATTACTCAAATCCAGACGACTACTACCCTTA TTACTTTAATTTAGCGAAACATACCGATGAAGAAACTGGTAATGATTACTACACCGTAAACTGGGAAGCACATAAAAAAT GTCATGAATCGGAAATTAAGTATGCAGAAAGCTTTGCTCAAAAAGCTGGGATGAAAATCAGCAGAAATTGGCAATTTAGA AGCATGGCGCGGATAACCCAAAAAGATGGTATTGATAAGTTAGATATCTCATCTAACTCCCCCATCAGAATTGAAATTGA CGAGTTTATAAAGCTAGCCAGAAGCTTGTAG
Upstream 100 bases:
>100_bases TTACCTACAAGCTAATGAGCCTGTGTAGACCCCTTTCTGAAACTTCAGCTAGCAATTCATTCCATTGATAAACATTTTAA AATATTATCAAAGGCTATCA
Downstream 100 bases:
>100_bases GAAAACCATCTATAAGGCTGAGTGCTGCTCAGCCCTATAAACCAACGTAAAAACATCGCCCTATAGTAAATCGTTAAGTT TCCGTACAGCATTCTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MEPLYLKLKSDLNQFFQDPNYLAFYQRFKAVTYLDGYVTFDENRKSDTLRWLLTPREGHLQQDYFIKALLAAYYREATTE QLIDLPQAYELSVKSFNQATVMRELVITNNKRIDLLLADAASKTLILIERKDGSKAHTGQLLSYFDWAETHYPDWKKYYI LSDSCNQNHDKQMHPAFVQLDDEWISTAIKRLLESEALPARQSGVLKDIQAYVFGEWDEHTEKADKDITKYAKLLAHKHA SLFETLSHESVMANGKQIQLGHVSPQNYFNSLALESQVRDSDDLNELLLILQASHEVLDYIQDYSSFEHLADEIKNIYPQ IISDVESDGVSFLLTKHYSNPDDYYPYYFNLAKHTDEETGNDYYTVNWEAHKKCHESEIKYAESFAQKAGMKISRNWQFR SMARITQKDGIDKLDISSNSPIRIEIDEFIKLARSL
Sequences:
>Translated_436_residues MEPLYLKLKSDLNQFFQDPNYLAFYQRFKAVTYLDGYVTFDENRKSDTLRWLLTPREGHLQQDYFIKALLAAYYREATTE QLIDLPQAYELSVKSFNQATVMRELVITNNKRIDLLLADAASKTLILIERKDGSKAHTGQLLSYFDWAETHYPDWKKYYI LSDSCNQNHDKQMHPAFVQLDDEWISTAIKRLLESEALPARQSGVLKDIQAYVFGEWDEHTEKADKDITKYAKLLAHKHA SLFETLSHESVMANGKQIQLGHVSPQNYFNSLALESQVRDSDDLNELLLILQASHEVLDYIQDYSSFEHLADEIKNIYPQ IISDVESDGVSFLLTKHYSNPDDYYPYYFNLAKHTDEETGNDYYTVNWEAHKKCHESEIKYAESFAQKAGMKISRNWQFR SMARITQKDGIDKLDISSNSPIRIEIDEFIKLARSL >Mature_436_residues MEPLYLKLKSDLNQFFQDPNYLAFYQRFKAVTYLDGYVTFDENRKSDTLRWLLTPREGHLQQDYFIKALLAAYYREATTE QLIDLPQAYELSVKSFNQATVMRELVITNNKRIDLLLADAASKTLILIERKDGSKAHTGQLLSYFDWAETHYPDWKKYYI LSDSCNQNHDKQMHPAFVQLDDEWISTAIKRLLESEALPARQSGVLKDIQAYVFGEWDEHTEKADKDITKYAKLLAHKHA SLFETLSHESVMANGKQIQLGHVSPQNYFNSLALESQVRDSDDLNELLLILQASHEVLDYIQDYSSFEHLADEIKNIYPQ IISDVESDGVSFLLTKHYSNPDDYYPYYFNLAKHTDEETGNDYYTVNWEAHKKCHESEIKYAESFAQKAGMKISRNWQFR SMARITQKDGIDKLDISSNSPIRIEIDEFIKLARSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50819; Mature: 50819
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLYLKLKSDLNQFFQDPNYLAFYQRFKAVTYLDGYVTFDENRKSDTLRWLLTPREGHL CCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHEEECCEEEECCCCCCCCEEEEECCCCCCC QQDYFIKALLAAYYREATTEQLIDLPQAYELSVKSFNQATVMRELVITNNKRIDLLLADA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC ASKTLILIERKDGSKAHTGQLLSYFDWAETHYPDWKKYYILSDSCNQNHDKQMHPAFVQL CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHEEE DDEWISTAIKRLLESEALPARQSGVLKDIQAYVFGEWDEHTEKADKDITKYAKLLAHKHA CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SLFETLSHESVMANGKQIQLGHVSPQNYFNSLALESQVRDSDDLNELLLILQASHEVLDY HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IQDYSSFEHLADEIKNIYPQIISDVESDGVSFLLTKHYSNPDDYYPYYFNLAKHTDEETG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHHHHCCCCCC NDYYTVNWEAHKKCHESEIKYAESFAQKAGMKISRNWQFRSMARITQKDGIDKLDISSNS CCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEECCCCC PIRIEIDEFIKLARSL CEEEEHHHHHHHHHCC >Mature Secondary Structure MEPLYLKLKSDLNQFFQDPNYLAFYQRFKAVTYLDGYVTFDENRKSDTLRWLLTPREGHL CCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHEEECCEEEECCCCCCCCEEEEECCCCCCC QQDYFIKALLAAYYREATTEQLIDLPQAYELSVKSFNQATVMRELVITNNKRIDLLLADA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC ASKTLILIERKDGSKAHTGQLLSYFDWAETHYPDWKKYYILSDSCNQNHDKQMHPAFVQL CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHEEE DDEWISTAIKRLLESEALPARQSGVLKDIQAYVFGEWDEHTEKADKDITKYAKLLAHKHA CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SLFETLSHESVMANGKQIQLGHVSPQNYFNSLALESQVRDSDDLNELLLILQASHEVLDY HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IQDYSSFEHLADEIKNIYPQIISDVESDGVSFLLTKHYSNPDDYYPYYFNLAKHTDEETG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHHHHCCCCCC NDYYTVNWEAHKKCHESEIKYAESFAQKAGMKISRNWQFRSMARITQKDGIDKLDISSNS CCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEECCCCC PIRIEIDEFIKLARSL CEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA