| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963095
Identifier: 157963095
GI number: 157963095
Start: 4022170
End: 4022703
Strand: Direct
Name: 157963095
Synonym: Spea_3279
Alternate gene names: NA
Gene position: 4022170-4022703 (Clockwise)
Preceding gene: 157963094
Following gene: 157963096
Centisome position: 77.73
GC content: 45.32
Gene sequence:
>534_bases ATGAGCATAAATGAAGATAAGTTATTAGATAAATTAGCACCCGATGAAAAAACGAGATTACTGCCAAGGCACGCAGTTAG CCTCTGCTTAACCCTGTCTATTTTCTGGTGGATTAACTCAAATTACAGTAACCCACTACTGCTGTCACTTGGGGCCGCTT CTATCCTGCTTGTGCTCTATATCGCACATAGGATGAATGTAATCGACTATGAGTCTCTACCAATTCACCTTTCTGCCAAA ATGCCAGGCTACATGCTATGGCTAGCCAAAGAGATCATTATCGCTAATATTTCTGTGGTCAAACACATTTGGCTTGGCAA TAGCAGCATCTCCCCAACTCTCGCCACAATAGACGCCACTCAGCGCACAGATCTTGGCAAGGTTATCTACGCCAACTCCA TAACCTTGACGCCGGGTACCGTCGCGGTGGGCTTAGTCGATGATAAAGTCATCATCCACGCCTTGAGCAAGGAAAATATC GATACCTTAAAAGCCGGCAAGATGGATCGCCGGGTCACTGAATTGGAAAAATGA
Upstream 100 bases:
>100_bases GTGGAATCATCATGTTCATAAGCCACTGAAAGCCATAGATGAAATGTAATGACAAAACATAACCCCTCAACCCAATGAAC CTATTGGTAACGGTGAGAAA
Downstream 100 bases:
>100_bases TGTTAACTGCAGCCACTATTGCCATTCTCGTTGTCATGCTCCTCGCGATCATCCGCTGCATCGTGGGGCCATCGCTATAC GATCGAATCTTAGCATTCAA
Product: cation antiporter
Products: NA
Alternate protein names: Monovalent Cation/H+ Antiporter Subunit E; MnhE/PhaE Family Monovalent Cation/Proton Antiporter; Na+/H+ Antiporter; Multisubunit Sodium/Proton Antiporter MrpE Subunit
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSINEDKLLDKLAPDEKTRLLPRHAVSLCLTLSIFWWINSNYSNPLLLSLGAASILLVLYIAHRMNVIDYESLPIHLSAK MPGYMLWLAKEIIIANISVVKHIWLGNSSISPTLATIDATQRTDLGKVIYANSITLTPGTVAVGLVDDKVIIHALSKENI DTLKAGKMDRRVTELEK
Sequences:
>Translated_177_residues MSINEDKLLDKLAPDEKTRLLPRHAVSLCLTLSIFWWINSNYSNPLLLSLGAASILLVLYIAHRMNVIDYESLPIHLSAK MPGYMLWLAKEIIIANISVVKHIWLGNSSISPTLATIDATQRTDLGKVIYANSITLTPGTVAVGLVDDKVIIHALSKENI DTLKAGKMDRRVTELEK >Mature_176_residues SINEDKLLDKLAPDEKTRLLPRHAVSLCLTLSIFWWINSNYSNPLLLSLGAASILLVLYIAHRMNVIDYESLPIHLSAKM PGYMLWLAKEIIIANISVVKHIWLGNSSISPTLATIDATQRTDLGKVIYANSITLTPGTVAVGLVDDKVIIHALSKENID TLKAGKMDRRVTELEK
Specific function: Unknown
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19644; Mature: 19513
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINEDKLLDKLAPDEKTRLLPRHAVSLCLTLSIFWWINSNYSNPLLLSLGAASILLVLY CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHH IAHRMNVIDYESLPIHLSAKMPGYMLWLAKEIIIANISVVKHIWLGNSSISPTLATIDAT HHHHCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECC QRTDLGKVIYANSITLTPGTVAVGLVDDKVIIHALSKENIDTLKAGKMDRRVTELEK CCCCCCEEEEECEEEECCCEEEEEEECCEEEEEECCCCCCCHHHCCCHHHHHHHHCC >Mature Secondary Structure SINEDKLLDKLAPDEKTRLLPRHAVSLCLTLSIFWWINSNYSNPLLLSLGAASILLVLY CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHH IAHRMNVIDYESLPIHLSAKMPGYMLWLAKEIIIANISVVKHIWLGNSSISPTLATIDAT HHHHCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECC QRTDLGKVIYANSITLTPGTVAVGLVDDKVIIHALSKENIDTLKAGKMDRRVTELEK CCCCCCEEEEECEEEECCCEEEEEEECCEEEEEECCCCCCCHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA